Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | HZT29_RS17370 | Genome accession | NZ_CP058853 |
| Coordinates | 3602816..3603796 (-) | Length | 326 a.a. |
| NCBI ID | WP_001295381.1 | Uniprot ID | A0A061K2W4 |
| Organism | Shigella flexneri strain STLEFF_38 | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3597816..3608796
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZT29_RS17340 (HZT29_17195) | - | 3598471..3598968 (+) | 498 | WP_001300769.1 | SprT family zinc-dependent metalloprotease | - |
| HZT29_RS17345 (HZT29_17200) | endA | 3599063..3599770 (+) | 708 | WP_000286500.1 | deoxyribonuclease I | - |
| HZT29_RS17350 (HZT29_17205) | rsmE | 3599850..3600581 (+) | 732 | WP_001222509.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| HZT29_RS17355 (HZT29_17210) | gshB | 3600594..3601544 (+) | 951 | WP_000593273.1 | glutathione synthase | - |
| HZT29_RS17360 (HZT29_17215) | - | 3601653..3602216 (+) | 564 | WP_001053178.1 | YqgE/AlgH family protein | - |
| HZT29_RS17365 (HZT29_17220) | ruvX | 3602216..3602632 (+) | 417 | WP_047632425.1 | Holliday junction resolvase RuvX | - |
| HZT29_RS23590 | - | 3602639..3602767 (-) | 129 | WP_001278270.1 | hypothetical protein | - |
| HZT29_RS17370 (HZT29_17225) | pilT | 3602816..3603796 (-) | 981 | WP_001295381.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| HZT29_RS17375 (HZT29_17230) | yggS | 3603814..3604518 (+) | 705 | WP_000997795.1 | pyridoxal phosphate homeostasis protein | - |
| HZT29_RS17380 (HZT29_17235) | yggT | 3604536..3605102 (+) | 567 | WP_001094831.1 | osmotic shock tolerance protein YggT | - |
| HZT29_RS17385 (HZT29_17240) | yggU | 3605099..3605389 (+) | 291 | WP_001277222.1 | DUF167 family protein YggU | - |
| HZT29_RS17390 (HZT29_17245) | - | 3605397..3605990 (+) | 594 | WP_001174735.1 | XTP/dITP diphosphatase | - |
| HZT29_RS17395 (HZT29_17250) | hemW | 3605983..3607119 (+) | 1137 | WP_000239928.1 | radical SAM family heme chaperone HemW | - |
| HZT29_RS17400 (HZT29_17255) | - | 3607274..3608281 (-) | 1008 | WP_000745217.1 | DUF1202 family protein | - |
Sequence
Protein
Download Length: 326 a.a. Molecular weight: 35926.14 Da Isoelectric Point: 5.7654
>NTDB_id=465678 HZT29_RS17370 WP_001295381.1 3602816..3603796(-) (pilT) [Shigella flexneri strain STLEFF_38]
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGLMEAAPFDAPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRQGISLALRLLPSHCPQLEQLGAPPVLPELLKSENGMILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHR
VGEGRL
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGLMEAAPFDAPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRQGISLALRLLPSHCPQLEQLGAPPVLPELLKSENGMILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHR
VGEGRL
Nucleotide
Download Length: 981 bp
>NTDB_id=465678 HZT29_RS17370 WP_001295381.1 3602816..3603796(-) (pilT) [Shigella flexneri strain STLEFF_38]
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACG
ATGGCGCATTCGCGGGCTAATGGAAGCTGCGCCGTTTGATGCGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAAAATGGCCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGGTTGCGTGGC
AGTGCGTTCGCGCAACGGCAAGGTATTTCTCTGGCATTACGGTTGTTACCTTCGCACTGTCCACAGCTCGAACAGCTTGG
TGCGCCACCGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCATGATTCTGGTGACGGGGGCGACGGGGAGTGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTTAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTGGAA
TATCTCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGGTTGCG
GGCCGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTACGTGACAGTGAGACAATCCGTCTGGCGCTGACGG
CGGCAGAAACCGGGCATCTGGTGCTGGCAACCTTACATACACGTGGTGCCGCGCAGGCAGTTGAGCGACTGGTGGATTCA
TTTCCGGCGCAGGAAAAAGACCCCGTGCGTAATCAACTGGCAGGTAGTTTACGGGCAGTGCTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTATTTGAATTGCTGATTAACACACCCGCGGTGGGGAATTTGATTCGTGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGATAACGTTTCAGCAGAGTTATCAGCACCGG
GTGGGGGAAGGGCGTTTGTGA
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACG
ATGGCGCATTCGCGGGCTAATGGAAGCTGCGCCGTTTGATGCGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAAAATGGCCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGGTTGCGTGGC
AGTGCGTTCGCGCAACGGCAAGGTATTTCTCTGGCATTACGGTTGTTACCTTCGCACTGTCCACAGCTCGAACAGCTTGG
TGCGCCACCGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCATGATTCTGGTGACGGGGGCGACGGGGAGTGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTTAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTGGAA
TATCTCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGGTTGCG
GGCCGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTACGTGACAGTGAGACAATCCGTCTGGCGCTGACGG
CGGCAGAAACCGGGCATCTGGTGCTGGCAACCTTACATACACGTGGTGCCGCGCAGGCAGTTGAGCGACTGGTGGATTCA
TTTCCGGCGCAGGAAAAAGACCCCGTGCGTAATCAACTGGCAGGTAGTTTACGGGCAGTGCTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTATTTGAATTGCTGATTAACACACCCGCGGTGGGGAATTTGATTCGTGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGATAACGTTTCAGCAGAGTTATCAGCACCGG
GTGGGGGAAGGGCGTTTGTGA
Similar proteins
Only experimentally validated proteins are listed.