Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | HUZ78_RS10535 | Genome accession | NZ_CP055015 |
| Coordinates | 2093089..2094069 (-) | Length | 326 a.a. |
| NCBI ID | WP_001055620.1 | Uniprot ID | A0A979GH91 |
| Organism | Shigella flexneri strain SWHEFF_71 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2088089..2099069
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ78_RS10505 (HUZ78_10435) | - | 2088752..2089249 (+) | 498 | WP_000858396.1 | SprT family zinc-dependent metalloprotease | - |
| HUZ78_RS10510 (HUZ78_10440) | endA | 2089344..2090051 (+) | 708 | WP_160514874.1 | deoxyribonuclease I | - |
| HUZ78_RS10515 (HUZ78_10445) | rsmE | 2090131..2090862 (+) | 732 | WP_001222508.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| HUZ78_RS10520 (HUZ78_10450) | gshB | 2090875..2091825 (+) | 951 | WP_129944487.1 | glutathione synthase | - |
| HUZ78_RS10525 (HUZ78_10455) | - | 2091934..2092497 (+) | 564 | WP_001053178.1 | YqgE/AlgH family protein | - |
| HUZ78_RS10530 (HUZ78_10460) | ruvX | 2092497..2092913 (+) | 417 | WP_000017111.1 | Holliday junction resolvase RuvX | - |
| HUZ78_RS10535 (HUZ78_10465) | pilT | 2093089..2094069 (-) | 981 | WP_001055620.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| HUZ78_RS10540 (HUZ78_10470) | yggS | 2094087..2094791 (+) | 705 | WP_096942107.1 | pyridoxal phosphate homeostasis protein | - |
| HUZ78_RS10545 (HUZ78_10475) | yggT | 2094809..2095375 (+) | 567 | WP_001094831.1 | osmotic shock tolerance protein YggT | - |
| HUZ78_RS10550 (HUZ78_10480) | yggU | 2095372..2095662 (+) | 291 | WP_001277222.1 | DUF167 family protein YggU | - |
| HUZ78_RS10555 (HUZ78_10485) | - | 2095670..2096263 (+) | 594 | WP_001174743.1 | XTP/dITP diphosphatase | - |
| HUZ78_RS10560 (HUZ78_10490) | hemW | 2096256..2097392 (+) | 1137 | WP_000239922.1 | radical SAM family heme chaperone HemW | - |
| HUZ78_RS10565 (HUZ78_10495) | - | 2097634..2098641 (-) | 1008 | WP_000745244.1 | DUF1202 family protein | - |
Sequence
Protein
Download Length: 326 a.a. Molecular weight: 35903.08 Da Isoelectric Point: 5.5860
>NTDB_id=455763 HUZ78_RS10535 WP_001055620.1 2093089..2094069(-) (pilT) [Shigella flexneri strain SWHEFF_71]
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGLMEAAPFDAPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRQGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YIYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMLTFQQSYQQR
VGEGRL
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGLMEAAPFDAPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRQGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YIYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMLTFQQSYQQR
VGEGRL
Nucleotide
Download Length: 981 bp
>NTDB_id=455763 HUZ78_RS10535 WP_001055620.1 2093089..2094069(-) (pilT) [Shigella flexneri strain SWHEFF_71]
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACG
ATGGCGCATTCGCGGGCTAATGGAAGCTGCGCCGTTTGATGCGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAAAATGGCCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGGTTGCGTGGC
AGTGCGTTCGCGCAACGGCAAGGTATTTCTCTGGCATTACGGTTGTTACCTTCGCACTGTCCACAGCTCGAACAGCTTGG
CGCACCAACGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGCGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTTGAA
TATATCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGTGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCG
GGCCGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGACAGCGAGACAATCCGTCTGGCACTGACGG
CGGCAGAAACCGGGCATTTGGTGCTGGCAACATTACATACGCGTGGTGCCGCGCAGGCAGTTGAGCGACTGGTGGATTCA
TTTCCGGCGCAGGAAAAAGATCCCGTACGTAATCAACTGGCAGGTAGTTTACGGGCCGTGTTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTGTTTGAATTATTGATTAACACTCCCGCGGTGGGGAATTTGATTCGCGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGTTAACGTTTCAGCAGAGTTATCAGCAGCGG
GTGGGGGAAGGGCGTTTGTGA
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACG
ATGGCGCATTCGCGGGCTAATGGAAGCTGCGCCGTTTGATGCGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAAAATGGCCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGGTTGCGTGGC
AGTGCGTTCGCGCAACGGCAAGGTATTTCTCTGGCATTACGGTTGTTACCTTCGCACTGTCCACAGCTCGAACAGCTTGG
CGCACCAACGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGCGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTTGAA
TATATCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGTGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCG
GGCCGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGACAGCGAGACAATCCGTCTGGCACTGACGG
CGGCAGAAACCGGGCATTTGGTGCTGGCAACATTACATACGCGTGGTGCCGCGCAGGCAGTTGAGCGACTGGTGGATTCA
TTTCCGGCGCAGGAAAAAGATCCCGTACGTAATCAACTGGCAGGTAGTTTACGGGCCGTGTTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTGTTTGAATTATTGATTAACACTCCCGCGGTGGGGAATTTGATTCGCGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGTTAACGTTTCAGCAGAGTTATCAGCAGCGG
GTGGGGGAAGGGCGTTTGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.