Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | HO400_RS07125 | Genome accession | NZ_CP053597 |
| Coordinates | 1502448..1503428 (+) | Length | 326 a.a. |
| NCBI ID | WP_001326494.1 | Uniprot ID | D3GUL4 |
| Organism | Escherichia coli strain T7Express_LysY | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1497448..1508428
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HO400_RS07095 (HO400_07095) | yggM | 1497963..1498970 (+) | 1008 | WP_000745210.1 | DUF1202 family protein | - |
| HO400_RS07100 (HO400_07100) | hemW | 1499125..1500261 (-) | 1137 | WP_000239943.1 | radical SAM family heme chaperone HemW | - |
| HO400_RS07105 (HO400_07105) | rdgB | 1500254..1500847 (-) | 594 | WP_001174777.1 | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | - |
| HO400_RS07110 (HO400_07110) | yggU | 1500855..1501145 (-) | 291 | WP_000994920.1 | DUF167 family protein YggU | - |
| HO400_RS07115 (HO400_07115) | yggT | 1501142..1501708 (-) | 567 | WP_001094831.1 | osmotic shock tolerance protein YggT | - |
| HO400_RS07120 (HO400_07120) | yggS | 1501726..1502430 (-) | 705 | WP_000997795.1 | pyridoxal phosphate homeostasis protein | - |
| HO400_RS07125 (HO400_07125) | pilT | 1502448..1503428 (+) | 981 | WP_001326494.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| HO400_RS07130 (HO400_07130) | ruvX | 1503612..1504028 (-) | 417 | WP_000017106.1 | Holliday junction resolvase RuvX | - |
| HO400_RS07135 (HO400_07135) | yqgE | 1504028..1504591 (-) | 564 | WP_001053178.1 | YqgE/AlgH family protein | - |
| HO400_RS07140 (HO400_07140) | gshB | 1504700..1505650 (-) | 951 | WP_000593273.1 | glutathione synthase | - |
| HO400_RS07145 (HO400_07145) | rsmE | 1505663..1506394 (-) | 732 | WP_001222509.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| HO400_RS07150 (HO400_07150) | endA | 1506474..1507181 (-) | 708 | WP_000286501.1 | deoxyribonuclease I | - |
| HO400_RS07155 (HO400_07155) | yggI | 1507276..1507773 (-) | 498 | WP_001300769.1 | SprT family zinc-dependent metalloprotease | - |
Sequence
Protein
Download Length: 326 a.a. Molecular weight: 35994.16 Da Isoelectric Point: 6.0804
>NTDB_id=445349 HO400_RS07125 WP_001326494.1 1502448..1503428(+) (pilT) [Escherichia coli strain T7Express_LysY]
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHR
VGEGRL
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHR
VGEGRL
Nucleotide
Download Length: 981 bp
>NTDB_id=445349 HO400_RS07125 WP_001326494.1 1502448..1503428(+) (pilT) [Escherichia coli strain T7Express_LysY]
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACG
ATGGCGCATTCGCGGCAGAATGGAAGCTGCGCCGTTTGATACGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAGAATGGTCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGATTGCGTGGC
AGCGCATTCGCGCAACGGCATGGCATTTCGCTGGCGTTACGGCTGTTACCTTCGCACTGCCCGCAGCTCGAACAGCTTGG
CGCACCAACGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGTGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTTGAA
TATCTCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCG
GGCCGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGACAGCGAGACAATCCGTCTGGCACTGACGG
CGGCAGAAACCGGGCATTTGGTGCTGGCAACATTACATACGCGTGGTGCCGCGCAGGCAGTTGAGCGACTGGTGGATTCA
TTTCCGGCGCAGGAAAAAGACCCCGTGCGTAATCAACTGGCAGGTAGTTTACGGGCAGTGCTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTATTTGAATTGCTGATTAACACACCCGCGGTGGGGAATTTGATTCGCGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGATAACGTTTCAGCAGAGTTATCAGCACCGG
GTGGGGGAAGGGCGTTTGTGA
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACG
ATGGCGCATTCGCGGCAGAATGGAAGCTGCGCCGTTTGATACGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAGAATGGTCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGATTGCGTGGC
AGCGCATTCGCGCAACGGCATGGCATTTCGCTGGCGTTACGGCTGTTACCTTCGCACTGCCCGCAGCTCGAACAGCTTGG
CGCACCAACGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGTGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTTGAA
TATCTCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCG
GGCCGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGACAGCGAGACAATCCGTCTGGCACTGACGG
CGGCAGAAACCGGGCATTTGGTGCTGGCAACATTACATACGCGTGGTGCCGCGCAGGCAGTTGAGCGACTGGTGGATTCA
TTTCCGGCGCAGGAAAAAGACCCCGTGCGTAATCAACTGGCAGGTAGTTTACGGGCAGTGCTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTATTTGAATTGCTGATTAACACACCCGCGGTGGGGAATTTGATTCGCGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGATAACGTTTCAGCAGAGTTATCAGCACCGG
GTGGGGGAAGGGCGTTTGTGA
Similar proteins
Only experimentally validated proteins are listed.