Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   HGO94_RS13640 Genome accession   NZ_CP051483
Coordinates   2760824..2761540 (-) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain NGA66a     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2755824..2766540
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HGO94_RS13620 (HGO94_10675) - 2756916..2757866 (+) 951 WP_000790327.1 LacI family DNA-binding transcriptional regulator -
  HGO94_RS13625 (HGO94_10680) - 2758015..2759499 (+) 1485 WP_000141427.1 sucrose-6-phosphate hydrolase -
  HGO94_RS13630 (HGO94_10685) - 2759496..2760455 (+) 960 WP_001253302.1 carbohydrate kinase -
  HGO94_RS13635 (HGO94_10690) - 2760643..2760752 (-) 110 Protein_2647 hypothetical protein -
  HGO94_RS13640 (HGO94_10695) agrA 2760824..2761540 (-) 717 WP_000688492.1 LytTR family DNA-binding domain-containing protein Regulator
  HGO94_RS13645 (HGO94_10700) - 2761559..2762851 (-) 1293 WP_000387803.1 GHKL domain-containing protein -
  HGO94_RS13650 (HGO94_10705) - 2762876..2763016 (-) 141 WP_000735197.1 cyclic lactone autoinducer peptide -
  HGO94_RS13655 (HGO94_10710) - 2763020..2763583 (-) 564 WP_001105705.1 accessory gene regulator AgrB -
  HGO94_RS13660 (HGO94_14115) hld 2763873..2763953 (+) 81 WP_000046023.1 delta-hemolysin -
  HGO94_RS13665 (HGO94_10720) - 2764552..2765337 (-) 786 WP_249741394.1 carbon-nitrogen family hydrolase -
  HGO94_RS13670 (HGO94_10725) - 2765698..2766324 (-) 627 WP_000522384.1 nitroreductase family protein -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=438891 HGO94_RS13640 WP_000688492.1 2760824..2761540(-) (agrA) [Staphylococcus aureus strain NGA66a]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=438891 HGO94_RS13640 WP_000688492.1 2760824..2761540(-) (agrA) [Staphylococcus aureus strain NGA66a]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCAGAATTAAGAACTCGAATTATAGATTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1