Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   HCU70_RS13655 Genome accession   NZ_CP050690
Coordinates   76..165 (-) Length   29 a.a.
NCBI ID   WP_280841927.1    Uniprot ID   -
Organism   Staphylococcus aureus strain PMB179-1     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 1..5165
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HCU70_RS13655 dprA 76..165 (-) 90 WP_280841927.1 hypothetical protein Machinery gene
  HCU70_RS13660 dprA 218..634 (-) 417 WP_280841928.1 DNA-processing protein DprA Machinery gene
  HCU70_RS00005 (HCU70_00005) - 807..2018 (-) 1212 Protein_2 aminoacyltransferase -
  HCU70_RS00010 (HCU70_00010) - 2075..3190 (-) 1116 Protein_3 LysM peptidoglycan-binding domain-containing protein -
  HCU70_RS00015 (HCU70_00015) sucD 3418..4314 (-) 897 WP_167774908.1 succinate--CoA ligase subunit alpha -

Sequence


Protein


Download         Length: 29 a.a.        Molecular weight: 3299.89 Da        Isoelectric Point: 9.9052

>NTDB_id=433970 HCU70_RS13655 WP_280841927.1 76..165(-) (dprA) [Staphylococcus aureus strain PMB179-1]
MAHQIALKYNLPTIAVLAFGHQTHYPKVH

Nucleotide


Download         Length: 90 bp        

>NTDB_id=433970 HCU70_RS13655 WP_280841927.1 76..165(-) (dprA) [Staphylococcus aureus strain PMB179-1]
ATGGCACATCAAATAGCTTTAAAATACAATCTCCCTACAATTGCAGTTTTAGCCTTTGGCCATCAAACACATTATCCAAA
AGTACATTAG

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Staphylococcus aureus MW2

100

93.103

0.931

  dprA Staphylococcus aureus N315

100

93.103

0.931

  dprA Riemerella anatipestifer ATCC 11845 = DSM 15868

55.172

100

0.552

  dprA Vibrio cholerae strain A1552

46.429

96.552

0.448

  dprA Neisseria meningitidis MC58

46.429

96.552

0.448

  dprA Neisseria meningitidis strain C311

46.429

96.552

0.448

  dprA Vibrio campbellii strain DS40M4

46.429

96.552

0.448

  dprA Streptococcus mutans UA159

50

89.655

0.448

  dprA Glaesserella parasuis strain SC1401

48.148

93.103

0.448

  dprA Neisseria gonorrhoeae MS11

48

86.207

0.414

  dprA/cilB/dalA Streptococcus pneumoniae R6

42.857

96.552

0.414

  dprA/cilB/dalA Streptococcus pneumoniae TIGR4

42.857

96.552

0.414

  dprA/cilB/dalA Streptococcus pneumoniae D39

42.857

96.552

0.414

  dprA/cilB/dalA Streptococcus pneumoniae Rx1

42.857

96.552

0.414

  dprA/cilB/dalA Streptococcus mitis NCTC 12261

42.857

96.552

0.414

  dprA/cilB/dalA Streptococcus mitis SK321

42.857

96.552

0.414

  dprA Legionella pneumophila strain ERS1305867

42.857

96.552

0.414

  dprA Latilactobacillus sakei subsp. sakei 23K

42.308

89.655

0.379

  dprA Bacillus subtilis subsp. subtilis str. 168

40.741

93.103

0.379

  dprA Haemophilus influenzae Rd KW20

40.741

93.103

0.379

  dprA Lactococcus lactis subsp. cremoris KW2

44

86.207

0.379