Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | BDGL_000161 | Genome accession | NC_016603 |
| Coordinates | 167638..168705 (-) | Length | 355 a.a. |
| NCBI ID | YP_004994429.1 | Uniprot ID | F0KFM7 |
| Organism | Acinetobacter pittii PHEA-2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 162638..173705
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BDGL_000155 | - | 163428..163883 (+) | 456 | YP_004994423.1 | hypothetical protein | - |
| BDGL_000156 | - | 164088..165104 (+) | 1017 | YP_004994424.1 | hypothetical protein | - |
| BDGL_000157 | - | 165104..165418 (+) | 315 | YP_004994425.1 | hypothetical protein | - |
| BDGL_000158 | omlA | 165483..165881 (-) | 399 | YP_004994426.1 | outer membrane lipoprotein | - |
| BDGL_000159 | fur | 165993..166430 (+) | 438 | YP_004994427.1 | ferric uptake regulator | - |
| BDGL_000160 | pilU | 166500..167618 (-) | 1119 | YP_004994428.1 | twitching motility protein | Machinery gene |
| BDGL_000161 | pilT | 167638..168705 (-) | 1068 | YP_004994429.1 | twitching motility protein | Machinery gene |
| BDGL_000162 | yggS | 168802..169494 (+) | 693 | YP_004994430.1 | hypothetical protein | - |
| BDGL_000163 | sbcC | 169695..173291 (-) | 3597 | YP_004994431.1 | ATP-dependent dsDNA exonuclease | - |
Sequence
Protein
Download Length: 355 a.a. Molecular weight: 39573.36 Da Isoelectric Point: 6.4334
>NTDB_id=42962 BDGL_000161 YP_004994429.1 167638..168705(-) (pilT) [Acinetobacter pittii PHEA-2]
MTYFDLLGEIMDITELLAFSVKNGASDLHLSAGMPPMIRVDGEVRRINLPALDHKDVHRLVYDIMNDKQRRDYEEKLETD
FSFEVPNVARFRVNAFNQNRGAGAVFRTIPSKVLTMEDLGLGQIFKDICDYPRGIVLVTGPTGSGKSTTLAAMMDYINEN
RYDHILTVEDPIEFVHQSKKCLINQREVHRDTHGFNEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHT
TSAAKTIDRVIDVFPAEEKDMVRAMLSESLQAVISQTLLKKNGGGRVAAHEIMIGIPAIRNLIRENKVAQMYSAIQTGAN
HGMTTLDQSLKNLVSRGVISPQTARTAAKQPESFL
MTYFDLLGEIMDITELLAFSVKNGASDLHLSAGMPPMIRVDGEVRRINLPALDHKDVHRLVYDIMNDKQRRDYEEKLETD
FSFEVPNVARFRVNAFNQNRGAGAVFRTIPSKVLTMEDLGLGQIFKDICDYPRGIVLVTGPTGSGKSTTLAAMMDYINEN
RYDHILTVEDPIEFVHQSKKCLINQREVHRDTHGFNEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHT
TSAAKTIDRVIDVFPAEEKDMVRAMLSESLQAVISQTLLKKNGGGRVAAHEIMIGIPAIRNLIRENKVAQMYSAIQTGAN
HGMTTLDQSLKNLVSRGVISPQTARTAAKQPESFL
Nucleotide
Download Length: 1068 bp
>NTDB_id=42962 BDGL_000161 YP_004994429.1 167638..168705(-) (pilT) [Acinetobacter pittii PHEA-2]
ATGACATATTTTGATTTACTTGGGGAAATTATGGATATTACAGAGCTACTCGCCTTCTCTGTGAAAAATGGCGCGTCCGA
TTTACATTTGTCTGCTGGCATGCCACCAATGATTCGCGTTGATGGTGAGGTCCGTCGTATTAACTTACCTGCTCTAGATC
ATAAAGATGTTCATCGTCTGGTCTACGACATCATGAATGATAAACAGCGTCGTGACTACGAAGAAAAACTCGAAACTGAC
TTTTCTTTTGAAGTGCCCAACGTTGCTCGTTTCCGTGTTAACGCATTTAACCAAAACCGTGGTGCGGGTGCAGTGTTTCG
TACCATTCCGTCCAAAGTACTTACCATGGAAGATTTAGGCTTAGGTCAAATCTTTAAAGACATTTGTGACTATCCACGCG
GCATTGTACTGGTGACAGGCCCAACAGGTTCGGGTAAATCGACCACACTTGCAGCCATGATGGACTACATCAACGAAAAC
CGTTATGACCATATTTTAACGGTTGAAGACCCTATCGAATTTGTACATCAGTCAAAGAAATGCCTGATTAACCAACGTGA
AGTGCATCGTGATACACACGGCTTTAATGAGGCACTACGTTCAGCACTGCGTGAAGACCCAGATATTATTTTGGTCGGTG
AGATGCGTGACCTTGAGACTATTCGTTTAGCACTTACTGCTGCCGAAACAGGACATTTGGTATTTGGCACGCTGCATACC
ACTTCTGCTGCGAAAACCATCGACCGTGTAATTGACGTATTCCCAGCCGAAGAAAAAGACATGGTTCGTGCCATGCTCTC
TGAATCATTGCAGGCTGTAATTTCACAAACCCTGCTTAAAAAGAATGGCGGCGGTCGTGTCGCAGCTCATGAAATCATGA
TTGGTATTCCTGCCATTCGTAACTTAATTCGTGAAAACAAAGTCGCGCAAATGTATTCAGCTATTCAGACTGGCGCAAAT
CATGGCATGACCACCCTCGACCAAAGCTTAAAAAATTTGGTGTCTCGCGGTGTGATCAGTCCACAAACCGCACGTACTGC
TGCTAAACAGCCTGAATCATTCCTATAA
ATGACATATTTTGATTTACTTGGGGAAATTATGGATATTACAGAGCTACTCGCCTTCTCTGTGAAAAATGGCGCGTCCGA
TTTACATTTGTCTGCTGGCATGCCACCAATGATTCGCGTTGATGGTGAGGTCCGTCGTATTAACTTACCTGCTCTAGATC
ATAAAGATGTTCATCGTCTGGTCTACGACATCATGAATGATAAACAGCGTCGTGACTACGAAGAAAAACTCGAAACTGAC
TTTTCTTTTGAAGTGCCCAACGTTGCTCGTTTCCGTGTTAACGCATTTAACCAAAACCGTGGTGCGGGTGCAGTGTTTCG
TACCATTCCGTCCAAAGTACTTACCATGGAAGATTTAGGCTTAGGTCAAATCTTTAAAGACATTTGTGACTATCCACGCG
GCATTGTACTGGTGACAGGCCCAACAGGTTCGGGTAAATCGACCACACTTGCAGCCATGATGGACTACATCAACGAAAAC
CGTTATGACCATATTTTAACGGTTGAAGACCCTATCGAATTTGTACATCAGTCAAAGAAATGCCTGATTAACCAACGTGA
AGTGCATCGTGATACACACGGCTTTAATGAGGCACTACGTTCAGCACTGCGTGAAGACCCAGATATTATTTTGGTCGGTG
AGATGCGTGACCTTGAGACTATTCGTTTAGCACTTACTGCTGCCGAAACAGGACATTTGGTATTTGGCACGCTGCATACC
ACTTCTGCTGCGAAAACCATCGACCGTGTAATTGACGTATTCCCAGCCGAAGAAAAAGACATGGTTCGTGCCATGCTCTC
TGAATCATTGCAGGCTGTAATTTCACAAACCCTGCTTAAAAAGAATGGCGGCGGTCGTGTCGCAGCTCATGAAATCATGA
TTGGTATTCCTGCCATTCGTAACTTAATTCGTGAAAACAAAGTCGCGCAAATGTATTCAGCTATTCAGACTGGCGCAAAT
CATGGCATGACCACCCTCGACCAAAGCTTAAAAAATTTGGTGTCTCGCGGTGTGATCAGTCCACAAACCGCACGTACTGC
TGCTAAACAGCCTGAATCATTCCTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter nosocomialis M2 |
99.13 |
97.183 |
0.963 |
| pilT | Acinetobacter baumannii D1279779 |
98.841 |
97.183 |
0.961 |
| pilT | Acinetobacter baumannii strain A118 |
98.841 |
97.183 |
0.961 |
| pilT | Acinetobacter baylyi ADP1 |
88.663 |
96.901 |
0.859 |
| pilT | Pseudomonas stutzeri DSM 10701 |
83.43 |
96.901 |
0.808 |
| pilT | Pseudomonas aeruginosa PAK |
83.14 |
96.901 |
0.806 |
| pilT | Legionella pneumophila strain Lp02 |
75.291 |
96.901 |
0.73 |
| pilT | Legionella pneumophila strain ERS1305867 |
75.291 |
96.901 |
0.73 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
71.429 |
94.648 |
0.676 |
| pilT | Vibrio cholerae strain A1552 |
71.429 |
94.648 |
0.676 |
| pilT | Neisseria meningitidis 8013 |
68.116 |
97.183 |
0.662 |
| pilT | Neisseria gonorrhoeae MS11 |
67.826 |
97.183 |
0.659 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.884 |
97.183 |
0.504 |
| pilU | Vibrio cholerae strain A1552 |
41.593 |
95.493 |
0.397 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.896 |
94.366 |
0.386 |
| pilU | Acinetobacter baylyi ADP1 |
39.017 |
97.465 |
0.38 |