Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | F7308_RS02975 | Genome accession | NC_015696 |
| Coordinates | 592907..593935 (+) | Length | 342 a.a. |
| NCBI ID | WP_041263614.1 | Uniprot ID | - |
| Organism | Francisella salina | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 587907..598935
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F7308_RS02960 (F7308_0595) | - | 588581..588958 (-) | 378 | WP_013922365.1 | GtrA family protein | - |
| F7308_RS02965 (F7308_0596) | - | 589029..589907 (+) | 879 | WP_013922366.1 | Dyp-type peroxidase | - |
| F7308_RS02970 (F7308_0597) | acnA | 590012..592816 (+) | 2805 | WP_013922367.1 | aconitate hydratase AcnA | - |
| F7308_RS02975 (F7308_0599) | pilT | 592907..593935 (+) | 1029 | WP_041263614.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| F7308_RS02980 (F7308_0600) | - | 594268..594948 (-) | 681 | WP_013922370.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| F7308_RS02985 | - | 594945..595391 (-) | 447 | WP_041263615.1 | DUF3429 domain-containing protein | - |
| F7308_RS02990 (F7308_0602) | - | 595402..596361 (-) | 960 | WP_013922372.1 | cytochrome d ubiquinol oxidase subunit II | - |
| F7308_RS02995 (F7308_0603) | - | 596364..597740 (-) | 1377 | WP_013922373.1 | cytochrome ubiquinol oxidase subunit I | - |
| F7308_RS03000 (F7308_0604) | - | 597960..598841 (+) | 882 | WP_013922374.1 | TIGR01777 family oxidoreductase | - |
Sequence
Protein
Download Length: 342 a.a. Molecular weight: 38014.85 Da Isoelectric Point: 7.0356
>NTDB_id=41516 F7308_RS02975 WP_041263614.1 592907..593935(+) (pilT) [Francisella salina]
MIRKLLTLCVQKKASDLHLSSGCKAKYRIDGDLIDIETSPVLNDKMISQMLLEIMTDDQKDELVETYECDFSIDDKDNDA
RFRVNAFFHNRGYGAVFRRLENTIPTLDQFGAPKILKTVQAKKGGLILVTGPTGSGKSSTLAALVNEINQKEDSHILTIE
DPVEFVHTSQRALVNQREVKRDTRSFNAALKSALREDPDCILVGEMRDLETIRLALEAAETGHLVLGTLHTMSAIKTVDR
VISVFPPAEQELVRNMLAESLQIVISQRLLKRKGGGRVAGYEVLISNTGIRNMIKDNKLSQIYTALQTGTAKGMATMEQS
IENLLKAGTITPEEAVKYIIIR
MIRKLLTLCVQKKASDLHLSSGCKAKYRIDGDLIDIETSPVLNDKMISQMLLEIMTDDQKDELVETYECDFSIDDKDNDA
RFRVNAFFHNRGYGAVFRRLENTIPTLDQFGAPKILKTVQAKKGGLILVTGPTGSGKSSTLAALVNEINQKEDSHILTIE
DPVEFVHTSQRALVNQREVKRDTRSFNAALKSALREDPDCILVGEMRDLETIRLALEAAETGHLVLGTLHTMSAIKTVDR
VISVFPPAEQELVRNMLAESLQIVISQRLLKRKGGGRVAGYEVLISNTGIRNMIKDNKLSQIYTALQTGTAKGMATMEQS
IENLLKAGTITPEEAVKYIIIR
Nucleotide
Download Length: 1029 bp
>NTDB_id=41516 F7308_RS02975 WP_041263614.1 592907..593935(+) (pilT) [Francisella salina]
ATGATAAGAAAATTATTAACTCTGTGTGTGCAAAAAAAAGCGTCAGACTTACATTTATCATCTGGTTGTAAAGCTAAGTA
TAGAATTGATGGGGACTTGATTGATATCGAAACATCTCCTGTATTAAATGATAAGATGATCTCTCAAATGCTCTTGGAGA
TTATGACAGATGATCAAAAGGATGAGCTTGTAGAGACCTATGAATGTGATTTTTCAATTGATGATAAAGATAATGATGCA
AGATTTAGGGTTAATGCATTTTTTCATAATCGTGGGTATGGTGCTGTATTTCGTCGTTTAGAGAATACTATCCCCACTCT
AGATCAGTTCGGGGCTCCTAAGATTCTGAAAACAGTTCAAGCTAAAAAGGGTGGTTTGATACTTGTTACTGGGCCTACAG
GTTCTGGTAAAAGTAGTACATTAGCAGCCTTAGTAAATGAGATAAACCAAAAAGAAGATTCTCATATCCTAACGATTGAA
GACCCTGTTGAATTTGTACATACAAGCCAAAGAGCTTTAGTTAACCAGCGTGAGGTCAAAAGAGATACAAGAAGCTTTAA
CGCAGCTTTGAAATCAGCACTAAGGGAAGATCCTGATTGTATCCTTGTTGGGGAAATGCGTGATTTAGAAACTATACGTT
TGGCTCTTGAGGCAGCTGAAACAGGTCACTTGGTACTAGGGACATTGCATACAATGTCAGCAATCAAAACAGTGGATAGG
GTAATATCGGTATTTCCACCAGCTGAGCAGGAATTAGTCCGTAATATGTTAGCAGAATCTTTACAGATTGTAATATCTCA
GCGTCTTCTTAAGCGTAAAGGTGGTGGGCGTGTTGCTGGGTACGAGGTTCTTATTTCTAATACTGGTATCAGAAATATGA
TAAAAGATAATAAGCTTTCTCAAATATACACAGCTCTTCAGACTGGTACGGCAAAAGGTATGGCAACTATGGAGCAAAGT
ATAGAAAACCTTCTTAAAGCGGGAACAATAACTCCTGAAGAGGCAGTTAAGTATATAATAATAAGATAG
ATGATAAGAAAATTATTAACTCTGTGTGTGCAAAAAAAAGCGTCAGACTTACATTTATCATCTGGTTGTAAAGCTAAGTA
TAGAATTGATGGGGACTTGATTGATATCGAAACATCTCCTGTATTAAATGATAAGATGATCTCTCAAATGCTCTTGGAGA
TTATGACAGATGATCAAAAGGATGAGCTTGTAGAGACCTATGAATGTGATTTTTCAATTGATGATAAAGATAATGATGCA
AGATTTAGGGTTAATGCATTTTTTCATAATCGTGGGTATGGTGCTGTATTTCGTCGTTTAGAGAATACTATCCCCACTCT
AGATCAGTTCGGGGCTCCTAAGATTCTGAAAACAGTTCAAGCTAAAAAGGGTGGTTTGATACTTGTTACTGGGCCTACAG
GTTCTGGTAAAAGTAGTACATTAGCAGCCTTAGTAAATGAGATAAACCAAAAAGAAGATTCTCATATCCTAACGATTGAA
GACCCTGTTGAATTTGTACATACAAGCCAAAGAGCTTTAGTTAACCAGCGTGAGGTCAAAAGAGATACAAGAAGCTTTAA
CGCAGCTTTGAAATCAGCACTAAGGGAAGATCCTGATTGTATCCTTGTTGGGGAAATGCGTGATTTAGAAACTATACGTT
TGGCTCTTGAGGCAGCTGAAACAGGTCACTTGGTACTAGGGACATTGCATACAATGTCAGCAATCAAAACAGTGGATAGG
GTAATATCGGTATTTCCACCAGCTGAGCAGGAATTAGTCCGTAATATGTTAGCAGAATCTTTACAGATTGTAATATCTCA
GCGTCTTCTTAAGCGTAAAGGTGGTGGGCGTGTTGCTGGGTACGAGGTTCTTATTTCTAATACTGGTATCAGAAATATGA
TAAAAGATAATAAGCTTTCTCAAATATACACAGCTCTTCAGACTGGTACGGCAAAAGGTATGGCAACTATGGAGCAAAGT
ATAGAAAACCTTCTTAAAGCGGGAACAATAACTCCTGAAGAGGCAGTTAAGTATATAATAATAAGATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter nosocomialis M2 |
55.689 |
97.661 |
0.544 |
| pilT | Acinetobacter baumannii D1279779 |
55.689 |
97.661 |
0.544 |
| pilT | Acinetobacter baumannii strain A118 |
55.689 |
97.661 |
0.544 |
| pilT | Pseudomonas aeruginosa PAK |
54.192 |
97.661 |
0.529 |
| pilT | Neisseria gonorrhoeae MS11 |
54.03 |
97.953 |
0.529 |
| pilT | Neisseria meningitidis 8013 |
54.03 |
97.953 |
0.529 |
| pilT | Acinetobacter baylyi ADP1 |
55.015 |
96.199 |
0.529 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
54.054 |
97.368 |
0.526 |
| pilT | Vibrio cholerae strain A1552 |
54.054 |
97.368 |
0.526 |
| pilT | Pseudomonas stutzeri DSM 10701 |
53.593 |
97.661 |
0.523 |
| pilT | Legionella pneumophila strain ERS1305867 |
53.593 |
97.661 |
0.523 |
| pilT | Legionella pneumophila strain Lp02 |
53.593 |
97.661 |
0.523 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
43.529 |
99.415 |
0.433 |
| pilU | Pseudomonas stutzeri DSM 10701 |
38.393 |
98.246 |
0.377 |
| pilU | Acinetobacter baylyi ADP1 |
38.209 |
97.953 |
0.374 |
| pilU | Vibrio cholerae strain A1552 |
38.769 |
95.029 |
0.368 |