Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | DESRU_RS15725 | Genome accession | NC_015589 |
| Coordinates | 3171858..3172952 (-) | Length | 364 a.a. |
| NCBI ID | WP_013843073.1 | Uniprot ID | F6DUD7 |
| Organism | Desulforamulus ruminis DSM 2154 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3166858..3177952
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DESRU_RS15695 (Desru_3105) | - | 3167122..3168057 (-) | 936 | WP_013843067.1 | PilX N-terminal domain-containing pilus assembly protein | - |
| DESRU_RS15700 (Desru_3106) | - | 3168059..3168658 (-) | 600 | WP_013843068.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| DESRU_RS15705 (Desru_3107) | - | 3168668..3169090 (-) | 423 | WP_013843069.1 | type IV pilus modification PilV family protein | - |
| DESRU_RS19990 (Desru_3108) | - | 3169131..3169721 (-) | 591 | WP_013843070.1 | type II secretion system protein | - |
| DESRU_RS15715 (Desru_3109) | - | 3169767..3170282 (-) | 516 | WP_013843071.1 | type II secretion system protein | - |
| DESRU_RS15720 (Desru_3110) | - | 3170404..3171645 (-) | 1242 | WP_013843072.1 | type II secretion system F family protein | - |
| DESRU_RS15725 (Desru_3111) | pilT | 3171858..3172952 (-) | 1095 | WP_013843073.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| DESRU_RS15730 (Desru_3112) | - | 3172949..3174661 (-) | 1713 | WP_013843074.1 | GspE/PulE family protein | - |
| DESRU_RS15735 (Desru_3113) | - | 3174673..3175422 (-) | 750 | WP_013843075.1 | prepilin peptidase | - |
| DESRU_RS15740 (Desru_3114) | aroB | 3175454..3176533 (-) | 1080 | WP_013843076.1 | 3-dehydroquinate synthase | - |
| DESRU_RS15745 (Desru_3115) | - | 3176530..3177048 (-) | 519 | WP_013843077.1 | shikimate kinase | - |
Sequence
Protein
Download Length: 364 a.a. Molecular weight: 39931.28 Da Isoelectric Point: 6.9838
>NTDB_id=41023 DESRU_RS15725 WP_013843073.1 3171858..3172952(-) (pilT) [Desulforamulus ruminis DSM 2154]
MNLMESILRVGSEIGASDIHITVGRPAIFRINGLLQSLDPGVALKGRDTDFLQKKLLPADTLELGKSMMDEAQFQKYLEW
GEVDFSYSIAGVGRFRVNVFKQRGSLAMAMRIIRTQIPSLGELDLPEVIGSLARRPRGLVLVTGPSGSGKSTTLAAMVDL
INSETKSHIITLEDPIEYLHFHKQSIVNQREIGLDALSFAKALRAAMREDPDVILVGEMRDLETIGTAITAAETGHLVLA
TLHTTGAAQTIDRIIDVFPPHQQQQIRIQLANTLQGVVCQQLLPRRDDTGRVVALEIMVVTPAIRNLIREGKTHQILSQI
QIGGKYGMQTLDMSLRSLVQRGIVSLEAAGEKAGDIEIINKHNL
MNLMESILRVGSEIGASDIHITVGRPAIFRINGLLQSLDPGVALKGRDTDFLQKKLLPADTLELGKSMMDEAQFQKYLEW
GEVDFSYSIAGVGRFRVNVFKQRGSLAMAMRIIRTQIPSLGELDLPEVIGSLARRPRGLVLVTGPSGSGKSTTLAAMVDL
INSETKSHIITLEDPIEYLHFHKQSIVNQREIGLDALSFAKALRAAMREDPDVILVGEMRDLETIGTAITAAETGHLVLA
TLHTTGAAQTIDRIIDVFPPHQQQQIRIQLANTLQGVVCQQLLPRRDDTGRVVALEIMVVTPAIRNLIREGKTHQILSQI
QIGGKYGMQTLDMSLRSLVQRGIVSLEAAGEKAGDIEIINKHNL
Nucleotide
Download Length: 1095 bp
>NTDB_id=41023 DESRU_RS15725 WP_013843073.1 3171858..3172952(-) (pilT) [Desulforamulus ruminis DSM 2154]
ATGAACCTTATGGAGTCCATACTACGGGTCGGTTCGGAAATTGGGGCTTCCGATATCCATATTACCGTGGGCCGGCCGGC
CATTTTCCGGATTAACGGTTTGCTGCAGTCCCTTGATCCAGGGGTTGCTTTAAAGGGCAGGGATACGGATTTTCTGCAAA
AAAAGCTGCTGCCCGCGGACACCCTGGAACTGGGCAAATCCATGATGGATGAGGCCCAGTTCCAGAAATATCTCGAATGG
GGAGAGGTGGATTTTTCCTACTCCATTGCCGGGGTAGGGCGCTTTCGGGTCAATGTTTTTAAACAGCGGGGCTCACTGGC
CATGGCCATGCGCATTATCCGCACCCAGATTCCCAGTCTGGGTGAGCTGGATCTGCCGGAGGTTATTGGCAGTCTGGCCA
GAAGGCCCAGGGGCCTGGTTTTGGTCACCGGGCCTAGCGGAAGCGGCAAGTCCACCACCCTGGCCGCCATGGTGGATCTC
ATCAATTCGGAAACCAAATCCCATATCATCACCCTGGAAGATCCCATTGAATACCTTCACTTTCACAAACAAAGCATTGT
CAACCAGAGGGAAATCGGGCTGGACGCCCTTTCCTTTGCCAAGGCTTTGCGGGCGGCCATGCGGGAAGACCCGGACGTGA
TTCTGGTGGGAGAAATGCGGGATCTGGAAACCATCGGCACCGCCATTACCGCCGCCGAAACCGGACATTTGGTATTGGCT
ACCCTGCATACAACCGGCGCCGCTCAGACCATTGACCGGATCATTGATGTGTTTCCGCCCCATCAGCAGCAGCAGATCCG
GATCCAACTGGCCAATACCCTCCAGGGAGTGGTCTGCCAGCAGTTGCTGCCCCGCAGGGATGATACCGGCCGGGTGGTAG
CCTTGGAAATTATGGTGGTCACTCCGGCCATCCGGAATTTGATTCGAGAGGGGAAAACACACCAGATTTTGTCACAAATC
CAGATCGGGGGCAAGTATGGTATGCAGACCCTGGATATGTCTTTAAGAAGCCTGGTGCAAAGGGGGATTGTCTCCCTGGA
AGCGGCGGGGGAAAAGGCCGGAGACATAGAAATAATAAACAAACATAATTTATAA
ATGAACCTTATGGAGTCCATACTACGGGTCGGTTCGGAAATTGGGGCTTCCGATATCCATATTACCGTGGGCCGGCCGGC
CATTTTCCGGATTAACGGTTTGCTGCAGTCCCTTGATCCAGGGGTTGCTTTAAAGGGCAGGGATACGGATTTTCTGCAAA
AAAAGCTGCTGCCCGCGGACACCCTGGAACTGGGCAAATCCATGATGGATGAGGCCCAGTTCCAGAAATATCTCGAATGG
GGAGAGGTGGATTTTTCCTACTCCATTGCCGGGGTAGGGCGCTTTCGGGTCAATGTTTTTAAACAGCGGGGCTCACTGGC
CATGGCCATGCGCATTATCCGCACCCAGATTCCCAGTCTGGGTGAGCTGGATCTGCCGGAGGTTATTGGCAGTCTGGCCA
GAAGGCCCAGGGGCCTGGTTTTGGTCACCGGGCCTAGCGGAAGCGGCAAGTCCACCACCCTGGCCGCCATGGTGGATCTC
ATCAATTCGGAAACCAAATCCCATATCATCACCCTGGAAGATCCCATTGAATACCTTCACTTTCACAAACAAAGCATTGT
CAACCAGAGGGAAATCGGGCTGGACGCCCTTTCCTTTGCCAAGGCTTTGCGGGCGGCCATGCGGGAAGACCCGGACGTGA
TTCTGGTGGGAGAAATGCGGGATCTGGAAACCATCGGCACCGCCATTACCGCCGCCGAAACCGGACATTTGGTATTGGCT
ACCCTGCATACAACCGGCGCCGCTCAGACCATTGACCGGATCATTGATGTGTTTCCGCCCCATCAGCAGCAGCAGATCCG
GATCCAACTGGCCAATACCCTCCAGGGAGTGGTCTGCCAGCAGTTGCTGCCCCGCAGGGATGATACCGGCCGGGTGGTAG
CCTTGGAAATTATGGTGGTCACTCCGGCCATCCGGAATTTGATTCGAGAGGGGAAAACACACCAGATTTTGTCACAAATC
CAGATCGGGGGCAAGTATGGTATGCAGACCCTGGATATGTCTTTAAGAAGCCTGGTGCAAAGGGGGATTGTCTCCCTGGA
AGCGGCGGGGGAAAAGGCCGGAGACATAGAAATAATAAACAAACATAATTTATAA
Similar proteins
Only experimentally validated proteins are listed.