Detailed information
Bioinformatically predicted
Overview
| Name | comGC/cglC | Type | Machinery gene |
| Locus tag | SOR_RS00840 | Genome accession | NC_015291 |
| Coordinates | 164583..164906 (+) | Length | 107 a.a. |
| NCBI ID | WP_000735753.1 | Uniprot ID | F2QGL1 |
| Organism | Streptococcus oralis Uo5 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 159583..169906
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SOR_RS00820 (SOR_0167) | nagA | 160943..162094 (+) | 1152 | WP_001134448.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
| SOR_RS00825 (SOR_0168) | - | 162247..162612 (+) | 366 | WP_000286396.1 | DUF1033 family protein | - |
| SOR_RS00830 (SOR_0169) | comGA/cglA/cilD | 162676..163617 (+) | 942 | WP_000249588.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SOR_RS00835 (SOR_0170) | comGB/cglB | 163565..164581 (+) | 1017 | WP_000355374.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SOR_RS00840 (SOR_0171) | comGC/cglC | 164583..164906 (+) | 324 | WP_000735753.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SOR_RS00845 (SOR_0172) | comGD/cglD | 164869..165303 (+) | 435 | WP_001180057.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| SOR_RS00850 (SOR_0173) | comGE/cglE | 165266..165568 (+) | 303 | WP_000413375.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| SOR_RS00855 (SOR_0174) | comGF/cglF | 165531..165992 (+) | 462 | WP_000250703.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SOR_RS00860 (SOR_0175) | comGG/cglG | 165970..166383 (+) | 414 | WP_000265656.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| SOR_RS00865 (SOR_0176) | - | 166416..167006 (+) | 591 | WP_000679766.1 | class I SAM-dependent methyltransferase | - |
| SOR_RS00870 (SOR_0177) | comYH | 167065..168018 (+) | 954 | WP_000345112.1 | class I SAM-dependent methyltransferase | Machinery gene |
| SOR_RS00875 (SOR_0178) | - | 168069..169259 (+) | 1191 | WP_000167792.1 | acetate kinase | - |
| SOR_RS00880 (SOR_0179) | rnpA | 169409..169780 (+) | 372 | WP_000748120.1 | ribonuclease P protein component | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 11931.14 Da Isoelectric Point: 10.1883
>NTDB_id=40169 SOR_RS00840 WP_000735753.1 164583..164906(+) (comGC/cglC) [Streptococcus oralis Uo5]
MKKLMIKLKKAQLKAFTLVEMLVVLLIISVLLLLFVPNLTKQKDAVDDKGKAAVVKVVESQAELYRLDKNDDASLSKLQA
DGRITAEQAKAYKDYHAKQKTSQTVAD
MKKLMIKLKKAQLKAFTLVEMLVVLLIISVLLLLFVPNLTKQKDAVDDKGKAAVVKVVESQAELYRLDKNDDASLSKLQA
DGRITAEQAKAYKDYHAKQKTSQTVAD
Nucleotide
Download Length: 324 bp
>NTDB_id=40169 SOR_RS00840 WP_000735753.1 164583..164906(+) (comGC/cglC) [Streptococcus oralis Uo5]
ATGAAAAAACTCATGATAAAACTAAAAAAAGCCCAGCTTAAAGCTTTCACTCTGGTAGAAATGTTAGTCGTCTTGCTCAT
CATCAGTGTTCTTCTCTTGCTCTTTGTGCCCAATTTGACCAAGCAAAAGGATGCCGTAGATGATAAAGGAAAAGCTGCTG
TTGTCAAGGTCGTGGAAAGCCAGGCAGAACTCTATCGTTTAGATAAAAATGATGACGCCAGCCTCAGCAAATTACAAGCG
GACGGTCGTATCACAGCTGAGCAAGCCAAAGCTTATAAAGACTACCATGCAAAACAAAAAACAAGTCAAACTGTTGCAGA
TTAA
ATGAAAAAACTCATGATAAAACTAAAAAAAGCCCAGCTTAAAGCTTTCACTCTGGTAGAAATGTTAGTCGTCTTGCTCAT
CATCAGTGTTCTTCTCTTGCTCTTTGTGCCCAATTTGACCAAGCAAAAGGATGCCGTAGATGATAAAGGAAAAGCTGCTG
TTGTCAAGGTCGTGGAAAGCCAGGCAGAACTCTATCGTTTAGATAAAAATGATGACGCCAGCCTCAGCAAATTACAAGCG
GACGGTCGTATCACAGCTGAGCAAGCCAAAGCTTATAAAGACTACCATGCAAAACAAAAAACAAGTCAAACTGTTGCAGA
TTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC/cglC | Streptococcus mitis NCTC 12261 |
88.785 |
100 |
0.888 |
| comGC/cglC | Streptococcus mitis SK321 |
85.859 |
92.523 |
0.794 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
83.838 |
92.523 |
0.776 |
| comGC/cglC | Streptococcus pneumoniae D39 |
83.838 |
92.523 |
0.776 |
| comGC/cglC | Streptococcus pneumoniae R6 |
83.838 |
92.523 |
0.776 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
82.828 |
92.523 |
0.766 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
67.619 |
98.131 |
0.664 |
| comYC | Streptococcus mutans UA140 |
70.103 |
90.654 |
0.636 |
| comYC | Streptococcus mutans UA159 |
70.103 |
90.654 |
0.636 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
56.863 |
95.327 |
0.542 |
| comYC | Streptococcus suis isolate S10 |
64.773 |
82.243 |
0.533 |
| comGC | Staphylococcus aureus MW2 |
52.564 |
72.897 |
0.383 |
| comGC | Staphylococcus aureus N315 |
52.564 |
72.897 |
0.383 |