Detailed information NTG0040170

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: SSAL_RS03845
• Genome accession: NC_017594
• Coordinates: 859496..860404 (-)
• Length: 302 a.a.
• NCBI ID: WP_014632989.1
• Uniprot ID: -
• Organism: Streptococcus salivarius 57.I
• Function: activate transcription of comX; activate transcription of comS (predicted from homology) Competence regulation

Genomic Context

Location: 854496..865404

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSAL_RS03820 (Ssal_00854)	-	854790..855437 (+)	648	WP_123940553.1	hypothetical protein	-
SSAL_RS03825 (Ssal_00857)	-	855430..855945 (+)	516	WP_014632985.1	DUF3592 domain-containing protein	-
SSAL_RS03830 (Ssal_00859)	-	856031..857080 (+)	1050	WP_014632986.1	hypothetical protein	-
SSAL_RS03835 (Ssal_00860)	-	857167..858456 (+)	1290	WP_014632987.1	hypothetical protein	-
SSAL_RS03840 (Ssal_00861)	-	858523..859389 (+)	867	WP_014632988.1	hypothetical protein	-
SSAL_RS03845 (Ssal_00862)	comR	859496..860404 (-)	909	WP_014632989.1	XRE family transcriptional regulator	Regulator
SSAL_RS03850 (Ssal_00863)	-	860560..861276 (-)	717	WP_014632990.1	ABC transporter permease	-
SSAL_RS03855 (Ssal_00865)	-	861269..862105 (-)	837	WP_014632991.1	ABC transporter ATP-binding protein	-
SSAL_RS03860 (Ssal_00866)	comR/comR1	862178..863098 (-)	921	WP_014632992.1	XRE family transcriptional regulator	Regulator
SSAL_RS03865 (Ssal_00867)	-	863316..863837 (+)	522	WP_004182334.1	RDD family protein	-
SSAL_RS03870 (Ssal_00868)	-	863962..864882 (+)	921	WP_014632994.1	multidrug resistance efflux transporter family protein	-

Sequence

Protein

• Length: 302 a.a.
• Molecular weight: 35409.72 Da
• Isoelectric Point: 4.5296

>NTDB_id=40170 SSAL_RS03845 WP_014632989.1 859496..860404(-) (comR) [Streptococcus salivarius 57.I]
MSEEIKIEIGKRIREERERLGLTREQVCDTEEELTVKQLMRIELGRSLPTIVKLQYISDKLGVSLNFLLGETKLDIPEDY
YQAKYKLMKSPVYGDSERIKKKLQDIEDLYDNYIDILPEDELLTIDIIERTLNFMTKGEEDAIETIFEDYLTQVLKKEAY
SLNDLLLIKYYTFKCQVGDYDEEIVESFRCKLINQELQGEELVNVELLGALSTIGGIYVMHHDYRNMKTIVDKMHTVIDK
TLQHAYKPAVLIFEAKYYLFYENNRDKAAELYNTATVLAEAFGDQVFIKNLKMEIKKDLNIE

Nucleotide

• Length: 909 bp

>NTDB_id=40170 SSAL_RS03845 WP_014632989.1 859496..860404(-) (comR) [Streptococcus salivarius 57.I]
ATGTCTGAAGAGATTAAAATCGAGATTGGAAAAAGAATTCGTGAAGAACGTGAGCGACTTGGTTTAACACGTGAGCAAGT
TTGTGATACCGAAGAAGAATTAACAGTAAAACAACTGATGAGAATTGAGCTAGGTCGTTCTTTACCAACCATTGTCAAAC
TGCAATACATCAGTGATAAATTGGGTGTTTCCCTCAACTTTTTGTTAGGTGAAACAAAACTAGACATTCCTGAAGACTAT
TATCAGGCTAAATATAAACTCATGAAGTCTCCTGTCTATGGCGATTCTGAACGTATCAAGAAAAAGCTGCAGGATATTGA
AGACCTCTACGACAACTATATTGATATTCTACCAGAGGACGAGCTGTTAACCATTGATATCATTGAAAGAACCCTGAATT
TTATGACTAAAGGTGAAGAGGATGCTATCGAAACTATCTTTGAAGACTATCTGACTCAAGTTTTGAAGAAAGAAGCATAT
TCCTTAAATGACCTCTTACTAATTAAATATTATACTTTTAAATGTCAAGTTGGTGACTATGATGAAGAAATTGTTGAAAG
TTTTCGATGTAAATTAATTAATCAAGAATTACAAGGGGAAGAGTTAGTTAATGTTGAACTACTTGGAGCATTGTCAACTA
TAGGTGGAATCTATGTCATGCATCATGATTATAGAAATATGAAAACTATTGTCGATAAAATGCATACTGTTATCGATAAG
ACTCTACAACATGCTTACAAACCCGCCGTACTCATTTTTGAAGCCAAATATTATCTCTTCTATGAGAACAATAGAGATAA
AGCGGCTGAGCTCTATAATACAGCTACCGTACTAGCTGAAGCTTTTGGTGACCAAGTCTTCATCAAAAATCTTAAAATGG
AAATAAAAAAAGATTTAAATATAGAATAG

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (77-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus thermophilus LMD-9	40.83	95.695	0.391
comR	Streptococcus thermophilus LMG 18311	40.83	95.695	0.391
comR	Streptococcus salivarius strain HSISS4	40.83	95.695	0.391
comR/comR1	Streptococcus sobrinus strain NIDR 6715-7	39.661	97.682	0.387
comR	Streptococcus salivarius SK126	40.636	93.709	0.381
comR/comR2	Streptococcus sobrinus strain NIDR 6715-7	38.832	96.358	0.374