Detailed information NTG0040170

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: SOR_RS00845
• Genome accession: NC_015291
• Coordinates: 164869..165303 (+)
• Length: 144 a.a.
• NCBI ID: WP_001180057.1
• Uniprot ID: -
• Organism: Streptococcus oralis Uo5
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 159869..170303

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SOR_RS00820 (SOR_0167)	nagA	160943..162094 (+)	1152	WP_001134448.1	N-acetylglucosamine-6-phosphate deacetylase	-
SOR_RS00825 (SOR_0168)	-	162247..162612 (+)	366	WP_000286396.1	DUF1033 family protein	-
SOR_RS00830 (SOR_0169)	comGA/cglA/cilD	162676..163617 (+)	942	WP_000249588.1	competence type IV pilus ATPase ComGA	Machinery gene
SOR_RS00835 (SOR_0170)	comGB/cglB	163565..164581 (+)	1017	WP_000355374.1	competence type IV pilus assembly protein ComGB	Machinery gene
SOR_RS00840 (SOR_0171)	comGC/cglC	164583..164906 (+)	324	WP_000735753.1	competence type IV pilus major pilin ComGC	Machinery gene
SOR_RS00845 (SOR_0172)	comGD/cglD	164869..165303 (+)	435	WP_001180057.1	competence type IV pilus minor pilin ComGD	Machinery gene
SOR_RS00850 (SOR_0173)	comGE/cglE	165266..165568 (+)	303	WP_000413375.1	competence type IV pilus minor pilin ComGE	Machinery gene
SOR_RS00855 (SOR_0174)	comGF/cglF	165531..165992 (+)	462	WP_000250703.1	competence type IV pilus minor pilin ComGF	Machinery gene
SOR_RS00860 (SOR_0175)	comGG/cglG	165970..166383 (+)	414	WP_000265656.1	competence type IV pilus minor pilin ComGG	Machinery gene
SOR_RS00865 (SOR_0176)	-	166416..167006 (+)	591	WP_000679766.1	class I SAM-dependent methyltransferase	-
SOR_RS00870 (SOR_0177)	comYH	167065..168018 (+)	954	WP_000345112.1	class I SAM-dependent methyltransferase	Machinery gene
SOR_RS00875 (SOR_0178)	-	168069..169259 (+)	1191	WP_000167792.1	acetate kinase	-
SOR_RS00880 (SOR_0179)	rnpA	169409..169780 (+)	372	WP_000748120.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 15847.29 Da
• Isoelectric Point: 10.5150

>NTDB_id=40170 SOR_RS00845 WP_001180057.1 164869..165303(+) (comGD/cglD) [Streptococcus oralis Uo5]
MQNKKQVKLLQIKAFTMLESLLVLGLVSILALGLSGSVQSSFAAVEEQIFFMEFEELYRETQKRSLASQQKTSLNLDGQT
ISNGSQKLTVPKGIQAPSGQSIIFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRTKETKN

Nucleotide

• Length: 435 bp

>NTDB_id=40170 SOR_RS00845 WP_001180057.1 164869..165303(+) (comGD/cglD) [Streptococcus oralis Uo5]
ATGCAAAACAAAAAACAAGTCAAACTGTTGCAGATTAAGGCCTTTACTATGCTGGAAAGTCTCCTTGTTTTGGGACTTGT
GAGTATCCTTGCCTTGGGCTTGTCCGGTTCTGTTCAGTCCAGTTTTGCAGCGGTGGAGGAGCAGATTTTCTTTATGGAGT
TTGAAGAACTCTATCGGGAAACGCAAAAACGCAGTCTAGCCAGTCAGCAAAAAACCAGCTTGAATTTAGATGGACAGACG
ATTAGCAATGGCAGTCAAAAGTTGACAGTTCCTAAAGGAATTCAGGCACCATCAGGACAAAGCATTATATTTGACCGAGC
TGGGGGCAATTCGTCCCTGGCTAAGGTTGAATTTCAGACCAGCAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATG
GAAAAATTAAACGCACTAAGGAAACAAAAAATTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	93.056	100	0.931
comGD/cglD	Streptococcus pneumoniae Rx1	95.489	92.361	0.882
comGD/cglD	Streptococcus pneumoniae D39	95.489	92.361	0.882
comGD/cglD	Streptococcus pneumoniae R6	95.489	92.361	0.882
comGD/cglD	Streptococcus mitis SK321	94.737	92.361	0.875
comGD/cglD	Streptococcus pneumoniae TIGR4	94.737	92.361	0.875
comYD	Streptococcus gordonii str. Challis substr. CH1	57.692	90.278	0.521
comYD	Streptococcus mutans UA140	48.092	90.972	0.438
comYD	Streptococcus mutans UA159	48.092	90.972	0.438