Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   SSAL_RS03045 Genome accession   NC_017594
Coordinates   609578..611446 (+) Length   622 a.a.
NCBI ID   WP_014632841.1    Uniprot ID   -
Organism   Streptococcus salivarius 57.I     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 604578..616446
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSAL_RS03035 (Ssal_00663) gshAB 605033..607297 (-) 2265 WP_013990251.1 bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB -
  SSAL_RS03040 (Ssal_00664) rcrP 607843..609588 (+) 1746 WP_045001583.1 ABC transporter ATP-binding protein Regulator
  SSAL_RS03045 (Ssal_00665) rcrQ 609578..611446 (+) 1869 WP_014632841.1 ABC transporter ATP-binding protein Regulator
  SSAL_RS03050 (Ssal_00666) - 611543..613062 (-) 1520 Protein_596 ATP-binding cassette domain-containing protein -

Sequence

Protein


Download         Length: 622 a.a.        Molecular weight: 68849.20 Da        Isoelectric Point: 4.9248

>NTDB_id=40167 SSAL_RS03045 WP_014632841.1 609578..611446(+) (rcrQ) [Streptococcus salivarius 57.I]
MQNKKKANWGSLARLLRFLWQDYKLSLSIAFILIVVASLATVNLTASIQSLVDVYVQPMLKSGSHDFGPLLHFLTSVAVF
CLIGVIANYVSSLLMATISQDSLRSLRNQLFARMQKLPVRYFDTHQHGDIMSIYTNDIDALRQAVEQSIPQLLQTTITLI
GVTVTMLTVSPLLFIVVLVMVGIMFMVIKNVSAKSGRYFGEQQKNLGIENGFIEEMMSGQKVVKAFVHEEESMADFDKIN
EQLFESSYLANRYANVLMPILGNLGNVSFVLTALVGGLFALNGVGGLTIGGLMAFLQLNRSFNGPITQVSQQLNFVLMAL
AGADRIFDLLDEPEEVDQGKVTLVNYELVDDQMVVTDKKTNLWAWKHPRPNGDYELVELVGNVVFQDVDFSYDGKKQILH
DVNLYADKGQKVAFVGATGAGKTTITNLINRFYDIQSGVITYDGIDVKLIEKDSLRRSLGIVLQDTHLFTGTIAENIAYG
RADATREEILEAARIANVDSFVQHLDNGYDTVLTDDGAGLSNGQRQLIAIARAALANAPVLILDEATSSIDSRTEKMVQE
GMDRLMEGRTVFVIAHRLSTIVNSDVIMVMDHGRIIERGDHDSLMEQGGTYYRLYTGGLEID

Nucleotide


Download         Length: 1869 bp        

>NTDB_id=40167 SSAL_RS03045 WP_014632841.1 609578..611446(+) (rcrQ) [Streptococcus salivarius 57.I]
ATGCAAAATAAGAAAAAAGCTAACTGGGGCTCTTTAGCAAGACTTTTGCGCTTTTTGTGGCAAGACTATAAACTTTCACT
TTCTATCGCCTTTATACTCATTGTTGTTGCTTCTTTGGCAACGGTCAATTTGACGGCTTCTATTCAGTCCTTGGTTGACG
TTTACGTTCAGCCCATGCTCAAATCTGGTAGCCATGACTTTGGTCCTCTTTTACATTTCTTGACTTCAGTGGCTGTGTTC
TGTCTTATTGGTGTGATTGCCAACTATGTGTCATCACTCCTCATGGCGACGATTTCGCAAGATTCTCTGCGTTCCCTTCG
TAATCAGCTCTTTGCTCGTATGCAAAAGCTGCCCGTTCGCTACTTTGATACTCACCAACACGGTGACATCATGTCTATCT
ACACCAACGACATCGATGCCCTTCGTCAGGCTGTTGAGCAGTCTATTCCACAGTTGCTACAAACAACTATTACCCTTATC
GGTGTGACTGTGACCATGCTTACGGTTAGTCCTCTCCTCTTTATCGTGGTCCTAGTTATGGTAGGTATCATGTTTATGGT
CATCAAAAATGTATCAGCTAAATCAGGCCGTTACTTTGGTGAACAACAAAAGAATTTGGGGATTGAAAATGGCTTCATTG
AAGAAATGATGTCAGGTCAAAAAGTGGTCAAGGCCTTTGTCCACGAAGAAGAAAGCATGGCTGATTTTGACAAGATTAAC
GAGCAACTTTTTGAATCTTCTTACTTGGCTAATCGCTATGCCAATGTTCTCATGCCAATTCTTGGGAACTTAGGAAATGT
TTCCTTTGTTTTGACTGCCTTGGTTGGTGGACTCTTTGCCCTTAATGGTGTCGGTGGTTTGACTATCGGTGGTCTCATGG
CCTTCCTACAATTGAACCGTTCTTTCAACGGACCTATTACTCAGGTCTCTCAACAACTGAATTTTGTTCTTATGGCACTT
GCCGGTGCTGACCGTATCTTTGACCTTCTGGACGAACCAGAGGAAGTTGACCAAGGTAAGGTCACTTTGGTCAATTACGA
ACTGGTAGATGATCAGATGGTTGTGACAGACAAGAAAACCAATCTCTGGGCTTGGAAACACCCACGTCCAAATGGTGACT
ACGAATTGGTCGAGTTGGTCGGAAATGTGGTCTTTCAAGACGTTGATTTCTCTTACGATGGTAAGAAACAAATCCTTCAT
GACGTTAACCTCTATGCAGACAAGGGGCAAAAGGTAGCCTTTGTGGGTGCGACAGGTGCTGGTAAGACGACGATTACCAA
CTTGATTAACCGTTTCTACGATATCCAATCTGGTGTGATTACTTATGATGGTATTGATGTCAAGCTGATTGAGAAAGATT
CTCTTCGTCGCTCACTTGGTATCGTGCTTCAAGATACCCATCTCTTCACAGGGACTATCGCTGAAAATATTGCCTATGGC
CGTGCCGATGCGACACGCGAGGAAATTCTTGAAGCTGCCCGTATTGCTAACGTGGATTCCTTTGTGCAACATTTGGACAA
TGGTTATGACACTGTTCTTACAGATGATGGTGCAGGCTTGTCTAACGGACAACGTCAGCTTATCGCCATTGCGCGTGCTG
CCCTTGCCAATGCACCGGTTCTTATCCTTGACGAGGCGACATCCTCTATTGACTCTCGTACTGAAAAAATGGTACAAGAG
GGGATGGACCGACTTATGGAAGGACGTACGGTCTTCGTTATTGCCCACCGTCTTTCAACCATTGTCAACTCTGACGTTAT
CATGGTTATGGACCACGGACGAATCATTGAACGTGGTGACCACGACAGCCTTATGGAACAAGGTGGTACCTACTACCGAC
TTTATACCGGTGGTCTGGAAATTGATTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(29-305)

ABC transporter (ABC_tran)

(399-548)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

37.236

98.875

0.368

Multiple sequence alignment