Detailed information NTG0040172

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: SOR_RS00855
• Genome accession: NC_015291
• Coordinates: 165531..165992 (+)
• Length: 153 a.a.
• NCBI ID: WP_000250703.1
• Uniprot ID: -
• Organism: Streptococcus oralis Uo5
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 160531..170992

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SOR_RS00820 (SOR_0167)	nagA	160943..162094 (+)	1152	WP_001134448.1	N-acetylglucosamine-6-phosphate deacetylase	-
SOR_RS00825 (SOR_0168)	-	162247..162612 (+)	366	WP_000286396.1	DUF1033 family protein	-
SOR_RS00830 (SOR_0169)	comGA/cglA/cilD	162676..163617 (+)	942	WP_000249588.1	competence type IV pilus ATPase ComGA	Machinery gene
SOR_RS00835 (SOR_0170)	comGB/cglB	163565..164581 (+)	1017	WP_000355374.1	competence type IV pilus assembly protein ComGB	Machinery gene
SOR_RS00840 (SOR_0171)	comGC/cglC	164583..164906 (+)	324	WP_000735753.1	competence type IV pilus major pilin ComGC	Machinery gene
SOR_RS00845 (SOR_0172)	comGD/cglD	164869..165303 (+)	435	WP_001180057.1	competence type IV pilus minor pilin ComGD	Machinery gene
SOR_RS00850 (SOR_0173)	comGE/cglE	165266..165568 (+)	303	WP_000413375.1	competence type IV pilus minor pilin ComGE	Machinery gene
SOR_RS00855 (SOR_0174)	comGF/cglF	165531..165992 (+)	462	WP_000250703.1	competence type IV pilus minor pilin ComGF	Machinery gene
SOR_RS00860 (SOR_0175)	comGG/cglG	165970..166383 (+)	414	WP_000265656.1	competence type IV pilus minor pilin ComGG	Machinery gene
SOR_RS00865 (SOR_0176)	-	166416..167006 (+)	591	WP_000679766.1	class I SAM-dependent methyltransferase	-
SOR_RS00870 (SOR_0177)	comYH	167065..168018 (+)	954	WP_000345112.1	class I SAM-dependent methyltransferase	Machinery gene
SOR_RS00875 (SOR_0178)	-	168069..169259 (+)	1191	WP_000167792.1	acetate kinase	-
SOR_RS00880 (SOR_0179)	rnpA	169409..169780 (+)	372	WP_000748120.1	ribonuclease P protein component	-
SOR_RS00885 (SOR_0180)	-	169755..170582 (+)	828	WP_332370225.1	membrane protein insertase YidC	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17844.53 Da
• Isoelectric Point: 9.6234

>NTDB_id=40172 SOR_RS00855 WP_000250703.1 165531..165992(+) (comGF/cglF) [Streptococcus oralis Uo5]
MVQRNCSILKSSKVRAFTLLESLLALIVISGGLLLFQAMSQLLISEVRYQQQSEQKEWLLFVDQLEAELERSQFEKVEGN
RLYMKQDGKDISIGKSKSDDFRKTDTSGRGYQPMVYGLKSAQITEENQLVRFRFQFQKGLEREFIYRVEKTKS

Nucleotide

• Length: 462 bp

>NTDB_id=40172 SOR_RS00855 WP_000250703.1 165531..165992(+) (comGF/cglF) [Streptococcus oralis Uo5]
ATGGTTCAGAGAAATTGCTCGATCTTAAAGAGCAGTAAGGTAAGAGCTTTTACTCTTTTAGAATCTCTGCTTGCCCTTAT
CGTCATTAGCGGAGGTTTGCTCCTTTTTCAAGCTATGAGTCAGCTCCTCATTTCAGAAGTTCGTTACCAGCAGCAAAGCG
AGCAAAAGGAGTGGCTCTTGTTTGTGGATCAACTGGAGGCAGAGTTAGAACGTTCGCAGTTTGAAAAGGTGGAAGGCAAT
CGCCTCTACATGAAACAGGATGGTAAGGATATCTCTATAGGGAAGTCTAAATCGGATGATTTTCGAAAAACGGATACCAG
CGGACGAGGCTATCAGCCGATGGTTTATGGACTCAAATCAGCTCAAATTACAGAGGAAAATCAATTGGTTCGCTTTCGTT
TCCAATTTCAAAAGGGCTTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAACAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus mitis SK321	89.542	100	0.895
comGF/cglF	Streptococcus mitis NCTC 12261	88.235	100	0.882
comGF/cglF	Streptococcus pneumoniae Rx1	88.235	100	0.882
comGF/cglF	Streptococcus pneumoniae D39	88.235	100	0.882
comGF/cglF	Streptococcus pneumoniae R6	88.235	100	0.882
comGF/cglF	Streptococcus pneumoniae TIGR4	88.235	100	0.882
comGF	Lactococcus lactis subsp. cremoris KW2	41.429	91.503	0.379