Detailed information NTG0398911

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HPE52_RS21855
• Genome accession: NZ_CP054345
• Coordinates: 4530130..4531113 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain SCU-176
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4525130..4536113

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPE52_RS21830 (HPE52_21820)	bcsF	4525291..4525482 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
HPE52_RS21835 (HPE52_21825)	bcsG	4525479..4527158 (+)	1680	WP_000191567.1	cellulose biosynthesis protein BcsG	-
HPE52_RS21840 (HPE52_21830)	ldrD	4527245..4527352 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
HPE52_RS21845 (HPE52_21835)	yhjV	4527828..4529099 (+)	1272	WP_001298005.1	aromatic amino acid transport family protein	-
HPE52_RS21850 (HPE52_21840)	dppF	4529129..4530133 (-)	1005	WP_000103577.1	dipeptide ABC transporter ATP-binding subunit DppF	-
HPE52_RS21855 (HPE52_21845)	amiE	4530130..4531113 (-)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
HPE52_RS21860 (HPE52_21850)	dppC	4531124..4532026 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
HPE52_RS21865 (HPE52_21855)	dppB	4532036..4533055 (-)	1020	WP_001540029.1	dipeptide ABC transporter permease DppB	-
HPE52_RS21870 (HPE52_21860)	dppA	4533362..4534969 (-)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=398911 HPE52_RS21855 WP_001196477.1 4530130..4531113(-) (amiE) [Escherichia coli strain SCU-176]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=398911 HPE52_RS21855 WP_001196477.1 4530130..4531113(-) (amiE) [Escherichia coli strain SCU-176]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATCCAGGCGCAAATCATCGAACTGCTGCTGGAGTTGCAGCAGAAAGAGAACATGGCGCTGGTGTTGATCACTCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404