Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | CALKRO_RS04185 | Genome accession | NC_014720 |
| Coordinates | 978939..979994 (+) | Length | 351 a.a. |
| NCBI ID | WP_013429853.1 | Uniprot ID | E4SB57 |
| Organism | Caldicellulosiruptor kronotskyensis 2002 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 973939..984994
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CALKRO_RS04175 (Calkro_0830) | - | 973952..977152 (+) | 3201 | WP_013429851.1 | response regulator | - |
| CALKRO_RS04180 (Calkro_0831) | - | 977173..978885 (+) | 1713 | WP_013429852.1 | GspE/PulE family protein | - |
| CALKRO_RS04185 (Calkro_0832) | pilT | 978939..979994 (+) | 1056 | WP_013429853.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| CALKRO_RS04190 (Calkro_0833) | - | 980065..981276 (+) | 1212 | WP_013429854.1 | type II secretion system F family protein | - |
| CALKRO_RS04195 (Calkro_0834) | - | 981315..981731 (+) | 417 | WP_041741565.1 | type II secretion system protein | - |
| CALKRO_RS04200 (Calkro_0835) | - | 981767..982204 (+) | 438 | WP_013429856.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| CALKRO_RS04205 (Calkro_0836) | - | 982251..983027 (+) | 777 | WP_013429857.1 | A24 family peptidase | - |
| CALKRO_RS04210 (Calkro_0837) | - | 983035..983325 (+) | 291 | WP_013429858.1 | late competence development ComFB family protein | - |
| CALKRO_RS04215 (Calkro_0838) | - | 983315..983869 (+) | 555 | WP_013429859.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| CALKRO_RS04220 (Calkro_0839) | - | 983866..984438 (+) | 573 | WP_013429860.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
Sequence
Protein
Download Length: 351 a.a. Molecular weight: 39669.76 Da Isoelectric Point: 7.2522
>NTDB_id=38930 CALKRO_RS04185 WP_013429853.1 978939..979994(+) (pilT) [Caldicellulosiruptor kronotskyensis 2002]
MDINSILKEAFLKEASDIHITPGVPPIYRIHGRLVRTDDSILTPEMVEEFVRQITNENQFKILEQKGEIDFSYGIKGVSR
FRVNVYKQRGSYSIAFRIIPVNIPPFETLGLPPVLKEFTKLNKGLVLVTGPTGSGKSTTLASLIDIINKERDVHIITLED
PIEYLHRHNKSIINQREIGSDTLSFADALRAALREDPDVILVGEMRDLETIAIALTAAETGHLVFSTLHTIGAAKTIDRI
IDVFPPHQQQQIRIQLSTVLQGVVSQQLLTRRDGKGRVVATEVMIVNPAIRNLIREAKTYQIQSIIQTHQRQGMITMEQS
LIDLYKRGFITREDAFNYATDFDFMQRLLSA
MDINSILKEAFLKEASDIHITPGVPPIYRIHGRLVRTDDSILTPEMVEEFVRQITNENQFKILEQKGEIDFSYGIKGVSR
FRVNVYKQRGSYSIAFRIIPVNIPPFETLGLPPVLKEFTKLNKGLVLVTGPTGSGKSTTLASLIDIINKERDVHIITLED
PIEYLHRHNKSIINQREIGSDTLSFADALRAALREDPDVILVGEMRDLETIAIALTAAETGHLVFSTLHTIGAAKTIDRI
IDVFPPHQQQQIRIQLSTVLQGVVSQQLLTRRDGKGRVVATEVMIVNPAIRNLIREAKTYQIQSIIQTHQRQGMITMEQS
LIDLYKRGFITREDAFNYATDFDFMQRLLSA
Nucleotide
Download Length: 1056 bp
>NTDB_id=38930 CALKRO_RS04185 WP_013429853.1 978939..979994(+) (pilT) [Caldicellulosiruptor kronotskyensis 2002]
ATGGATATTAATTCAATTCTCAAAGAAGCATTTCTCAAGGAGGCTTCAGATATACATATTACACCAGGTGTTCCTCCAAT
TTATCGAATACACGGCAGATTAGTACGGACAGATGACTCAATTCTGACCCCTGAGATGGTGGAGGAGTTTGTGCGACAGA
TCACCAACGAAAACCAGTTTAAAATTCTTGAGCAGAAAGGTGAGATAGACTTTTCTTACGGCATAAAAGGCGTAAGCAGA
TTCAGAGTAAATGTTTATAAACAAAGAGGTTCATATTCTATAGCTTTTAGAATAATTCCAGTAAATATACCACCATTTGA
GACACTTGGCCTTCCACCAGTTTTGAAAGAATTTACAAAATTGAATAAAGGGCTTGTTTTAGTTACAGGTCCAACTGGTT
CGGGTAAGTCAACAACACTGGCATCGCTGATTGACATAATCAACAAAGAAAGAGATGTACATATAATCACATTAGAGGAC
CCAATAGAGTATTTGCATAGACACAACAAGAGTATTATCAATCAAAGAGAGATAGGTAGTGACACACTCAGCTTTGCAGA
CGCGCTGAGGGCGGCTTTGAGAGAAGATCCTGACGTAATCCTGGTTGGTGAGATGAGGGATTTGGAGACAATTGCGATAG
CTTTAACAGCTGCTGAAACAGGACACCTGGTGTTTTCCACACTTCACACAATTGGAGCGGCAAAGACAATAGACCGTATC
ATTGACGTTTTTCCACCGCATCAACAGCAGCAGATAAGAATTCAGCTATCAACTGTTTTGCAGGGAGTTGTGTCTCAGCA
GCTTTTGACCCGTCGTGATGGTAAAGGCAGGGTTGTTGCAACAGAGGTAATGATAGTAAATCCGGCCATAAGAAACCTCA
TTAGGGAGGCTAAAACGTATCAGATTCAATCAATTATTCAAACGCATCAGCGACAGGGCATGATAACAATGGAGCAGTCA
CTCATAGACTTGTACAAACGAGGGTTTATTACTCGTGAAGATGCGTTCAACTATGCTACTGACTTTGATTTTATGCAAAG
ACTGCTCAGTGCATAA
ATGGATATTAATTCAATTCTCAAAGAAGCATTTCTCAAGGAGGCTTCAGATATACATATTACACCAGGTGTTCCTCCAAT
TTATCGAATACACGGCAGATTAGTACGGACAGATGACTCAATTCTGACCCCTGAGATGGTGGAGGAGTTTGTGCGACAGA
TCACCAACGAAAACCAGTTTAAAATTCTTGAGCAGAAAGGTGAGATAGACTTTTCTTACGGCATAAAAGGCGTAAGCAGA
TTCAGAGTAAATGTTTATAAACAAAGAGGTTCATATTCTATAGCTTTTAGAATAATTCCAGTAAATATACCACCATTTGA
GACACTTGGCCTTCCACCAGTTTTGAAAGAATTTACAAAATTGAATAAAGGGCTTGTTTTAGTTACAGGTCCAACTGGTT
CGGGTAAGTCAACAACACTGGCATCGCTGATTGACATAATCAACAAAGAAAGAGATGTACATATAATCACATTAGAGGAC
CCAATAGAGTATTTGCATAGACACAACAAGAGTATTATCAATCAAAGAGAGATAGGTAGTGACACACTCAGCTTTGCAGA
CGCGCTGAGGGCGGCTTTGAGAGAAGATCCTGACGTAATCCTGGTTGGTGAGATGAGGGATTTGGAGACAATTGCGATAG
CTTTAACAGCTGCTGAAACAGGACACCTGGTGTTTTCCACACTTCACACAATTGGAGCGGCAAAGACAATAGACCGTATC
ATTGACGTTTTTCCACCGCATCAACAGCAGCAGATAAGAATTCAGCTATCAACTGTTTTGCAGGGAGTTGTGTCTCAGCA
GCTTTTGACCCGTCGTGATGGTAAAGGCAGGGTTGTTGCAACAGAGGTAATGATAGTAAATCCGGCCATAAGAAACCTCA
TTAGGGAGGCTAAAACGTATCAGATTCAATCAATTATTCAAACGCATCAGCGACAGGGCATGATAACAATGGAGCAGTCA
CTCATAGACTTGTACAAACGAGGGTTTATTACTCGTGAAGATGCGTTCAACTATGCTACTGACTTTGATTTTATGCAAAG
ACTGCTCAGTGCATAA
Similar proteins
Only experimentally validated proteins are listed.