Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | FXO11_RS03035 | Genome accession | NZ_CP043042 |
| Coordinates | 697855..698889 (+) | Length | 344 a.a. |
| NCBI ID | WP_148861519.1 | Uniprot ID | - |
| Organism | Marinobacter fonticola strain CS412 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 692855..703889
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FXO11_RS03015 | - | 692909..694873 (-) | 1965 | WP_148861515.1 | dynamin family protein | - |
| FXO11_RS03020 | - | 695284..695868 (-) | 585 | WP_148861516.1 | YggT family protein | - |
| FXO11_RS03025 | proC | 695942..696772 (-) | 831 | WP_148861517.1 | pyrroline-5-carboxylate reductase | - |
| FXO11_RS03030 | - | 696887..697585 (-) | 699 | WP_148861518.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| FXO11_RS03035 | pilT | 697855..698889 (+) | 1035 | WP_148861519.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| FXO11_RS03040 | pilU | 699072..700193 (+) | 1122 | WP_148861520.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| FXO11_RS03045 | - | 700427..701830 (+) | 1404 | WP_148861521.1 | OmpP1/FadL family transporter | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 38087.75 Da Isoelectric Point: 6.4197
>NTDB_id=380273 FXO11_RS03035 WP_148861519.1 697855..698889(+) (pilT) [Marinobacter fonticola strain CS412]
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPMEHKEVHSLIYDIMNDKQRKDYEEFLETDFSFEVPGVAR
FRVNAFNQNRGAGAVFRTIPSKVLTMDDLGMGQVFKDVSSVPRGLVLVTGPTGSGKSTTLAAMLDYINDSRYEHVLTIED
PIEFVHESKKCLVNQREVHRDTLGFNEALRSALREDPDIILVGELRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRI
VDVFPAEEKSMVRSMLSESLQAVVSQTLMKKVGGGRVAAHEIMIGTSAIRNLIREDKVAQMYSAIQTGGSIGMQTLDQCL
QRMLQKGLITREAARSKAKMPDNF
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPMEHKEVHSLIYDIMNDKQRKDYEEFLETDFSFEVPGVAR
FRVNAFNQNRGAGAVFRTIPSKVLTMDDLGMGQVFKDVSSVPRGLVLVTGPTGSGKSTTLAAMLDYINDSRYEHVLTIED
PIEFVHESKKCLVNQREVHRDTLGFNEALRSALREDPDIILVGELRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRI
VDVFPAEEKSMVRSMLSESLQAVVSQTLMKKVGGGRVAAHEIMIGTSAIRNLIREDKVAQMYSAIQTGGSIGMQTLDQCL
QRMLQKGLITREAARSKAKMPDNF
Nucleotide
Download Length: 1035 bp
>NTDB_id=380273 FXO11_RS03035 WP_148861519.1 697855..698889(+) (pilT) [Marinobacter fonticola strain CS412]
ATGGATATAACTGAACTCCTGGCCTTTTCGGCGAAGCAGGGCGCGTCGGACTTGCACCTGTCTGCCGGACTGCCACCGAT
GATTCGTGTTGACGGCGATGTGCGGCGAATCAACCTGCCGCCGATGGAGCACAAAGAAGTCCATTCGCTCATTTACGACA
TCATGAACGATAAGCAGCGGAAGGACTACGAAGAATTCCTCGAGACCGACTTCTCCTTCGAAGTGCCGGGCGTGGCCCGC
TTCCGGGTCAACGCCTTTAACCAGAATCGCGGCGCCGGCGCCGTATTCCGGACGATCCCGTCCAAGGTCCTGACCATGGA
CGATCTGGGCATGGGGCAGGTCTTCAAGGACGTGTCTTCGGTACCCCGCGGGCTGGTGCTGGTCACCGGACCGACCGGTT
CCGGTAAGTCCACGACCCTGGCGGCGATGCTCGACTACATCAACGACAGCCGTTACGAGCACGTCCTCACCATCGAAGAC
CCCATCGAATTTGTGCACGAATCCAAGAAGTGTCTGGTTAACCAGCGGGAAGTTCACCGCGACACGCTTGGGTTCAACGA
GGCCCTGCGTTCGGCCCTGCGGGAAGACCCCGACATTATCCTGGTGGGTGAGCTGCGGGACCTGGAGACTATTCGTCTGG
CCCTGACCGCGGCGGAAACCGGTCACCTGGTCTTCGGCACCTTGCATACCACGTCCGCTGCCAAAACCATCGACCGTATC
GTCGACGTCTTCCCGGCGGAAGAAAAGTCCATGGTCCGCTCGATGCTGTCCGAATCGCTACAGGCAGTTGTCTCCCAGAC
GCTGATGAAAAAAGTCGGTGGCGGCCGGGTGGCGGCTCACGAGATTATGATCGGCACTTCGGCGATCCGGAACCTGATCC
GGGAAGACAAAGTGGCGCAGATGTACTCGGCGATCCAGACCGGTGGTTCGATTGGGATGCAGACCCTCGACCAATGCCTC
CAGCGTATGCTCCAGAAGGGCTTGATCACCCGTGAGGCGGCCCGATCCAAGGCGAAGATGCCAGACAACTTCTGA
ATGGATATAACTGAACTCCTGGCCTTTTCGGCGAAGCAGGGCGCGTCGGACTTGCACCTGTCTGCCGGACTGCCACCGAT
GATTCGTGTTGACGGCGATGTGCGGCGAATCAACCTGCCGCCGATGGAGCACAAAGAAGTCCATTCGCTCATTTACGACA
TCATGAACGATAAGCAGCGGAAGGACTACGAAGAATTCCTCGAGACCGACTTCTCCTTCGAAGTGCCGGGCGTGGCCCGC
TTCCGGGTCAACGCCTTTAACCAGAATCGCGGCGCCGGCGCCGTATTCCGGACGATCCCGTCCAAGGTCCTGACCATGGA
CGATCTGGGCATGGGGCAGGTCTTCAAGGACGTGTCTTCGGTACCCCGCGGGCTGGTGCTGGTCACCGGACCGACCGGTT
CCGGTAAGTCCACGACCCTGGCGGCGATGCTCGACTACATCAACGACAGCCGTTACGAGCACGTCCTCACCATCGAAGAC
CCCATCGAATTTGTGCACGAATCCAAGAAGTGTCTGGTTAACCAGCGGGAAGTTCACCGCGACACGCTTGGGTTCAACGA
GGCCCTGCGTTCGGCCCTGCGGGAAGACCCCGACATTATCCTGGTGGGTGAGCTGCGGGACCTGGAGACTATTCGTCTGG
CCCTGACCGCGGCGGAAACCGGTCACCTGGTCTTCGGCACCTTGCATACCACGTCCGCTGCCAAAACCATCGACCGTATC
GTCGACGTCTTCCCGGCGGAAGAAAAGTCCATGGTCCGCTCGATGCTGTCCGAATCGCTACAGGCAGTTGTCTCCCAGAC
GCTGATGAAAAAAGTCGGTGGCGGCCGGGTGGCGGCTCACGAGATTATGATCGGCACTTCGGCGATCCGGAACCTGATCC
GGGAAGACAAAGTGGCGCAGATGTACTCGGCGATCCAGACCGGTGGTTCGATTGGGATGCAGACCCTCGACCAATGCCTC
CAGCGTATGCTCCAGAAGGGCTTGATCACCCGTGAGGCGGCCCGATCCAAGGCGAAGATGCCAGACAACTTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
89.535 |
100 |
0.895 |
| pilT | Pseudomonas stutzeri DSM 10701 |
88.663 |
100 |
0.887 |
| pilT | Acinetobacter nosocomialis M2 |
82.558 |
100 |
0.826 |
| pilT | Acinetobacter baumannii D1279779 |
82.558 |
100 |
0.826 |
| pilT | Acinetobacter baumannii strain A118 |
82.558 |
100 |
0.826 |
| pilT | Acinetobacter baylyi ADP1 |
81.395 |
100 |
0.814 |
| pilT | Legionella pneumophila strain Lp02 |
76.627 |
98.256 |
0.753 |
| pilT | Legionella pneumophila strain ERS1305867 |
76.627 |
98.256 |
0.753 |
| pilT | Neisseria gonorrhoeae MS11 |
67.059 |
98.837 |
0.663 |
| pilT | Neisseria meningitidis 8013 |
67.059 |
98.837 |
0.663 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
66.471 |
98.837 |
0.657 |
| pilT | Vibrio cholerae strain A1552 |
66.471 |
98.837 |
0.657 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.014 |
100 |
0.512 |
| pilU | Pseudomonas stutzeri DSM 10701 |
41.194 |
97.384 |
0.401 |
| pilU | Acinetobacter baylyi ADP1 |
38.15 |
100 |
0.384 |
| pilU | Vibrio cholerae strain A1552 |
37.971 |
100 |
0.381 |