Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | FI644_RS16175 | Genome accession | NZ_CP041305 |
| Coordinates | 3239950..3240990 (+) | Length | 346 a.a. |
| NCBI ID | WP_053477178.1 | Uniprot ID | A0A0Q3TBV5 |
| Organism | Cytobacillus solani strain 5L6 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3234950..3245990
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FI644_RS16155 | - | 3235231..3235659 (-) | 429 | WP_053477181.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| FI644_RS16160 | - | 3235933..3236904 (+) | 972 | WP_142108605.1 | hypothetical protein | - |
| FI644_RS16165 | - | 3236910..3238250 (+) | 1341 | WP_053477179.1 | G5 domain-containing protein | - |
| FI644_RS16170 | - | 3238277..3239938 (+) | 1662 | WP_142109051.1 | GspE/PulE family protein | - |
| FI644_RS16175 | pilT | 3239950..3240990 (+) | 1041 | WP_053477178.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| FI644_RS16180 | - | 3240992..3242197 (+) | 1206 | WP_053477177.1 | type II secretion system F family protein | - |
| FI644_RS16185 | - | 3242328..3242795 (+) | 468 | WP_053477176.1 | type II secretion system protein | - |
| FI644_RS16190 | comC | 3242859..3243620 (+) | 762 | WP_053477175.1 | A24 family peptidase | Machinery gene |
| FI644_RS16195 | pilM | 3243635..3244624 (+) | 990 | WP_053477174.1 | type IV pilus biogenesis protein PilM | - |
| FI644_RS16200 | - | 3244627..3245277 (+) | 651 | WP_053477173.1 | PilN domain-containing protein | - |
Sequence
Protein
Download Length: 346 a.a. Molecular weight: 38700.80 Da Isoelectric Point: 7.6727
>NTDB_id=371163 FI644_RS16175 WP_053477178.1 3239950..3240990(+) (pilT) [Cytobacillus solani strain 5L6]
MKEMIDHLLHAAFELKASDIHLTVGVPPIMRINGDLKKYGKESLKPEDTEGMARAIIPDHMWEQFKEKGELDFSYGIPKV
SRFRVNTYFQRSCIALAIRIVPTRIPTIEELELPNVLKRIAEKPQGLVLVTGPTGSGKSTTLASMIQYMNHHMRKHIITL
EDPIEYLHKHGNSIIDQREVGFDTNNFANGLRASLRQDPDVILVGEMRDLETIQTAITAAETGHLVFGTLHTSSAPATIN
RIIDVFPPSQQAQVRIQLASVLVSVISQRLFPTIDKKGRRAATEILINNSAVANLIRNEKIYQIVNIMQTSRASGMHTLE
TSIKELVQLGVISKEAAEPFIQEMLS
MKEMIDHLLHAAFELKASDIHLTVGVPPIMRINGDLKKYGKESLKPEDTEGMARAIIPDHMWEQFKEKGELDFSYGIPKV
SRFRVNTYFQRSCIALAIRIVPTRIPTIEELELPNVLKRIAEKPQGLVLVTGPTGSGKSTTLASMIQYMNHHMRKHIITL
EDPIEYLHKHGNSIIDQREVGFDTNNFANGLRASLRQDPDVILVGEMRDLETIQTAITAAETGHLVFGTLHTSSAPATIN
RIIDVFPPSQQAQVRIQLASVLVSVISQRLFPTIDKKGRRAATEILINNSAVANLIRNEKIYQIVNIMQTSRASGMHTLE
TSIKELVQLGVISKEAAEPFIQEMLS
Nucleotide
Download Length: 1041 bp
>NTDB_id=371163 FI644_RS16175 WP_053477178.1 3239950..3240990(+) (pilT) [Cytobacillus solani strain 5L6]
ATGAAAGAAATGATTGACCATTTGCTTCATGCAGCCTTTGAGCTGAAAGCATCAGATATTCATTTAACGGTGGGGGTACC
GCCGATTATGAGGATAAATGGGGATTTGAAGAAATATGGGAAGGAATCGCTGAAGCCGGAAGATACGGAAGGAATGGCAA
GAGCGATCATTCCTGATCATATGTGGGAGCAATTTAAAGAAAAAGGTGAATTAGATTTTTCCTATGGGATTCCGAAAGTA
TCCAGATTTCGCGTGAATACGTATTTCCAGCGGTCATGTATTGCCCTGGCAATTAGAATCGTTCCGACAAGAATACCGAC
AATAGAGGAATTGGAATTGCCGAATGTATTAAAGCGAATTGCTGAAAAACCACAAGGGCTTGTGTTGGTAACAGGCCCAA
CCGGGAGCGGAAAATCAACAACCTTGGCATCTATGATTCAATATATGAACCATCATATGAGAAAGCATATTATTACGCTG
GAAGATCCAATTGAGTATCTTCATAAACATGGAAATTCAATTATCGATCAGCGAGAAGTTGGTTTTGATACGAATAATTT
TGCCAATGGACTTAGAGCATCCTTAAGACAAGATCCTGATGTCATACTTGTTGGGGAAATGAGAGATTTAGAGACGATCC
AGACGGCGATCACTGCAGCCGAAACGGGGCATTTAGTTTTTGGAACCTTGCATACGTCAAGTGCGCCAGCAACAATCAAC
CGAATTATTGATGTTTTTCCGCCGTCTCAGCAGGCACAGGTTAGAATTCAATTGGCTTCTGTACTTGTATCCGTTATTTC
GCAGCGCTTATTTCCAACGATTGATAAAAAAGGGCGGAGAGCTGCAACTGAGATTTTGATTAACAACTCGGCTGTTGCTA
ATTTGATTCGCAATGAAAAAATCTATCAGATTGTTAATATTATGCAGACTTCAAGGGCATCTGGCATGCATACGCTTGAA
ACAAGCATCAAAGAACTTGTTCAATTAGGAGTTATTTCAAAAGAAGCAGCAGAACCATTCATACAGGAGATGCTGAGTTA
A
ATGAAAGAAATGATTGACCATTTGCTTCATGCAGCCTTTGAGCTGAAAGCATCAGATATTCATTTAACGGTGGGGGTACC
GCCGATTATGAGGATAAATGGGGATTTGAAGAAATATGGGAAGGAATCGCTGAAGCCGGAAGATACGGAAGGAATGGCAA
GAGCGATCATTCCTGATCATATGTGGGAGCAATTTAAAGAAAAAGGTGAATTAGATTTTTCCTATGGGATTCCGAAAGTA
TCCAGATTTCGCGTGAATACGTATTTCCAGCGGTCATGTATTGCCCTGGCAATTAGAATCGTTCCGACAAGAATACCGAC
AATAGAGGAATTGGAATTGCCGAATGTATTAAAGCGAATTGCTGAAAAACCACAAGGGCTTGTGTTGGTAACAGGCCCAA
CCGGGAGCGGAAAATCAACAACCTTGGCATCTATGATTCAATATATGAACCATCATATGAGAAAGCATATTATTACGCTG
GAAGATCCAATTGAGTATCTTCATAAACATGGAAATTCAATTATCGATCAGCGAGAAGTTGGTTTTGATACGAATAATTT
TGCCAATGGACTTAGAGCATCCTTAAGACAAGATCCTGATGTCATACTTGTTGGGGAAATGAGAGATTTAGAGACGATCC
AGACGGCGATCACTGCAGCCGAAACGGGGCATTTAGTTTTTGGAACCTTGCATACGTCAAGTGCGCCAGCAACAATCAAC
CGAATTATTGATGTTTTTCCGCCGTCTCAGCAGGCACAGGTTAGAATTCAATTGGCTTCTGTACTTGTATCCGTTATTTC
GCAGCGCTTATTTCCAACGATTGATAAAAAAGGGCGGAGAGCTGCAACTGAGATTTTGATTAACAACTCGGCTGTTGCTA
ATTTGATTCGCAATGAAAAAATCTATCAGATTGTTAATATTATGCAGACTTCAAGGGCATCTGGCATGCATACGCTTGAA
ACAAGCATCAAAGAACTTGTTCAATTAGGAGTTATTTCAAAAGAAGCAGCAGAACCATTCATACAGGAGATGCTGAGTTA
A
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
49.853 |
97.977 |
0.488 |
| pilT | Vibrio cholerae strain A1552 |
49.853 |
97.977 |
0.488 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
50.755 |
95.665 |
0.486 |
| pilT | Neisseria meningitidis 8013 |
49.55 |
96.243 |
0.477 |
| pilT | Neisseria gonorrhoeae MS11 |
49.55 |
96.243 |
0.477 |
| pilT | Pseudomonas aeruginosa PAK |
48.649 |
96.243 |
0.468 |
| pilT | Legionella pneumophila strain Lp02 |
48.048 |
96.243 |
0.462 |
| pilT | Legionella pneumophila strain ERS1305867 |
48.048 |
96.243 |
0.462 |
| pilT | Acinetobacter baumannii strain A118 |
48.78 |
94.798 |
0.462 |
| pilT | Acinetobacter nosocomialis M2 |
48.78 |
94.798 |
0.462 |
| pilT | Acinetobacter baumannii D1279779 |
48.78 |
94.798 |
0.462 |
| pilT | Acinetobacter baylyi ADP1 |
47.416 |
95.087 |
0.451 |
| pilT | Pseudomonas stutzeri DSM 10701 |
46.108 |
96.532 |
0.445 |
| pilU | Pseudomonas stutzeri DSM 10701 |
42.342 |
96.243 |
0.408 |
| pilU | Vibrio cholerae strain A1552 |
42.547 |
93.064 |
0.396 |
| pilU | Acinetobacter baylyi ADP1 |
42.5 |
92.486 |
0.393 |