Detailed information
Bioinformatically predicted
Overview
| Name | comGC/cglC | Type | Machinery gene |
| Locus tag | SMI_RS01075 | Genome accession | NC_013853 |
| Coordinates | 207491..207814 (+) | Length | 107 a.a. |
| NCBI ID | WP_000738641.1 | Uniprot ID | - |
| Organism | Streptococcus mitis B6 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 202491..212814
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SMI_RS01050 (smi_0202) | nagA | 202683..203834 (+) | 1152 | WP_001134545.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
| SMI_RS01055 (smi_0203) | - | 203998..205056 (+) | 1059 | WP_000649461.1 | zinc-dependent alcohol dehydrogenase family protein | - |
| SMI_RS01060 (smi_0204) | - | 205142..205507 (+) | 366 | WP_000286392.1 | DUF1033 family protein | - |
| SMI_RS01065 (smi_0205) | comGA/cglA/cilD | 205584..206525 (+) | 942 | WP_000249543.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SMI_RS01070 (smi_0206) | comGB/cglB | 206473..207489 (+) | 1017 | WP_164925538.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SMI_RS01075 (smi_0207) | comGC/cglC | 207491..207814 (+) | 324 | WP_000738641.1 | comG operon protein ComGC | Machinery gene |
| SMI_RS01080 (smi_0208) | comGD/cglD | 207777..208211 (+) | 435 | WP_164925504.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| SMI_RS01085 (smi_0209) | comGE/cglE | 208174..208476 (+) | 303 | WP_153197443.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| SMI_RS01090 (smi_0210) | comGF/cglF | 208439..208900 (+) | 462 | WP_000250522.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SMI_RS01095 (smi_0211) | comGG/cglG | 208878..209291 (+) | 414 | WP_000265641.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| SMI_RS01100 (smi_0212) | - | 209324..209909 (+) | 586 | Protein_201 | class I SAM-dependent methyltransferase | - |
| SMI_RS01105 (smi_0213) | comYH | 209970..210923 (+) | 954 | WP_000345096.1 | class I SAM-dependent methyltransferase | Machinery gene |
| SMI_RS01110 (smi_0214) | - | 211034..212167 (+) | 1134 | WP_001113734.1 | acetate kinase | - |
| SMI_RS01115 (smi_0215) | rnpA | 212313..212684 (+) | 372 | WP_000739250.1 | ribonuclease P protein component | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 11958.09 Da Isoelectric Point: 9.9097
>NTDB_id=36285 SMI_RS01075 WP_000738641.1 207491..207814(+) (comGC/cglC) [Streptococcus mitis B6]
MKKMMTFLKKAKVKAFTLVEMLVVLLIISVLLLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLDKNEDASLSKLQA
DGRITEEQAKAYKEYHAKQNTSQTVAD
MKKMMTFLKKAKVKAFTLVEMLVVLLIISVLLLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLDKNEDASLSKLQA
DGRITEEQAKAYKEYHAKQNTSQTVAD
Nucleotide
Download Length: 324 bp
>NTDB_id=36285 SMI_RS01075 WP_000738641.1 207491..207814(+) (comGC/cglC) [Streptococcus mitis B6]
ATGAAAAAAATGATGACATTCTTGAAAAAAGCGAAAGTGAAGGCTTTCACACTTGTGGAAATGTTGGTGGTCTTGCTCAT
CATCAGCGTGCTTCTCTTGCTCTTTGTACCTAATTTGACCAAGCAAAAAGAGGCGGTCAATGACAAAGGAAAAGCAGCTG
TTGTTAAGGTAGTGGAAAGCCAGGCAGAACTTTATAGCTTAGATAAAAATGAAGATGCTAGCCTAAGCAAGTTACAAGCA
GATGGGCGAATCACAGAAGAACAGGCTAAAGCCTATAAAGAATACCATGCTAAACAAAATACCAGTCAAACCGTTGCAGA
TTAA
ATGAAAAAAATGATGACATTCTTGAAAAAAGCGAAAGTGAAGGCTTTCACACTTGTGGAAATGTTGGTGGTCTTGCTCAT
CATCAGCGTGCTTCTCTTGCTCTTTGTACCTAATTTGACCAAGCAAAAAGAGGCGGTCAATGACAAAGGAAAAGCAGCTG
TTGTTAAGGTAGTGGAAAGCCAGGCAGAACTTTATAGCTTAGATAAAAATGAAGATGCTAGCCTAAGCAAGTTACAAGCA
GATGGGCGAATCACAGAAGAACAGGCTAAAGCCTATAAAGAATACCATGCTAAACAAAATACCAGTCAAACCGTTGCAGA
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC/cglC | Streptococcus mitis NCTC 12261 |
100 |
100 |
1 |
| comGC/cglC | Streptococcus mitis SK321 |
93.204 |
96.262 |
0.897 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
92.157 |
95.327 |
0.879 |
| comGC/cglC | Streptococcus pneumoniae D39 |
92.157 |
95.327 |
0.879 |
| comGC/cglC | Streptococcus pneumoniae R6 |
92.157 |
95.327 |
0.879 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
90.291 |
96.262 |
0.869 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
69.524 |
98.131 |
0.682 |
| comYC | Streptococcus mutans UA140 |
68.421 |
88.785 |
0.607 |
| comYC | Streptococcus mutans UA159 |
68.421 |
88.785 |
0.607 |
| comYC | Streptococcus suis isolate S10 |
70.37 |
75.701 |
0.533 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
54.455 |
94.393 |
0.514 |
| comGC | Staphylococcus aureus MW2 |
51.163 |
80.374 |
0.411 |
| comGC | Staphylococcus aureus N315 |
51.163 |
80.374 |
0.411 |