Detailed information NTG0036286

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: SMI_RS01080
• Genome accession: NC_013853
• Coordinates: 207777..208211 (+)
• Length: 144 a.a.
• NCBI ID: WP_164925504.1
• Uniprot ID: -
• Organism: Streptococcus mitis B6
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 202777..213211

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SMI_RS01055 (smi_0203)	-	203998..205056 (+)	1059	WP_000649461.1	zinc-dependent alcohol dehydrogenase family protein	-
SMI_RS01060 (smi_0204)	-	205142..205507 (+)	366	WP_000286392.1	DUF1033 family protein	-
SMI_RS01065 (smi_0205)	comGA/cglA/cilD	205584..206525 (+)	942	WP_000249543.1	competence type IV pilus ATPase ComGA	Machinery gene
SMI_RS01070 (smi_0206)	comGB/cglB	206473..207489 (+)	1017	WP_164925538.1	competence type IV pilus assembly protein ComGB	Machinery gene
SMI_RS01075 (smi_0207)	comGC/cglC	207491..207814 (+)	324	WP_000738641.1	comG operon protein ComGC	Machinery gene
SMI_RS01080 (smi_0208)	comGD/cglD	207777..208211 (+)	435	WP_164925504.1	competence type IV pilus minor pilin ComGD	Machinery gene
SMI_RS01085 (smi_0209)	comGE/cglE	208174..208476 (+)	303	WP_153197443.1	competence type IV pilus minor pilin ComGE	Machinery gene
SMI_RS01090 (smi_0210)	comGF/cglF	208439..208900 (+)	462	WP_000250522.1	competence type IV pilus minor pilin ComGF	Machinery gene
SMI_RS01095 (smi_0211)	comGG/cglG	208878..209291 (+)	414	WP_000265641.1	competence type IV pilus minor pilin ComGG	Machinery gene
SMI_RS01100 (smi_0212)	-	209324..209909 (+)	586	Protein_201	class I SAM-dependent methyltransferase	-
SMI_RS01105 (smi_0213)	comYH	209970..210923 (+)	954	WP_000345096.1	class I SAM-dependent methyltransferase	Machinery gene
SMI_RS01110 (smi_0214)	-	211034..212167 (+)	1134	WP_001113734.1	acetate kinase	-
SMI_RS01115 (smi_0215)	rnpA	212313..212684 (+)	372	WP_000739250.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 15770.25 Da
• Isoelectric Point: 10.4335

>NTDB_id=36286 SMI_RS01080 WP_164925504.1 207777..208211(+) (comGD/cglD) [Streptococcus mitis B6]
MLNKIPVKPLQIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQT
ISNGSQKLTVPKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 435 bp

>NTDB_id=36286 SMI_RS01080 WP_164925504.1 207777..208211(+) (comGD/cglD) [Streptococcus mitis B6]
ATGCTAAACAAAATACCAGTCAAACCGTTGCAGATTAAGGCCTTTACCATGCTTGAAAGTCTCTTGGTTTTGGGTCTGGT
GAGTATCCTTGCCTTGGGCTTATCCGGCTCTGTCCAGTCCACTTTTGCGGCGGTGGAGGAGCAGATTTTCTTTATGGAGT
TTGAAGAACTCTATCGGGAAACTCAAAAACGCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAATCTAGATGGGCAGACG
ATTAGCAATGGCAGTCAAAAGTTGACAGTTCCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGC
TGGGGGCAATTCGTCCCTGGCTAAGGTTGAATTTCAGACCAGTAAAGGAGCGATTCGTTATCAATTATATCTAGGAAATG
GAAAAATTAAACGCATTAAGGAAACAAAAAATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	98.611	100	0.986
comGD/cglD	Streptococcus pneumoniae Rx1	98.496	92.361	0.91
comGD/cglD	Streptococcus pneumoniae D39	98.496	92.361	0.91
comGD/cglD	Streptococcus pneumoniae R6	98.496	92.361	0.91
comGD/cglD	Streptococcus mitis SK321	97.744	92.361	0.903
comGD/cglD	Streptococcus pneumoniae TIGR4	97.744	92.361	0.903
comYD	Streptococcus gordonii str. Challis substr. CH1	56.716	93.056	0.528
comYD	Streptococcus mutans UA140	49.612	89.583	0.444
comYD	Streptococcus mutans UA159	49.612	89.583	0.444