Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   ES300_RS09035 Genome accession   NZ_CP038251
Coordinates   1783036..1784073 (-) Length   345 a.a.
NCBI ID   WP_000727268.1    Uniprot ID   A0A0U0L8C3
Organism   Streptococcus pneumoniae strain TVO_1901944     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1778036..1789073
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES300_RS09010 (ES300_09500) - 1778775..1780106 (-) 1332 WP_000390042.1 hemolysin family protein -
  ES300_RS09015 (ES300_09505) endA 1780397..1781221 (-) 825 WP_001036786.1 DNA-entry nuclease EndA Machinery gene
  ES300_RS09020 (ES300_09510) - 1781260..1781448 (-) 189 WP_001813390.1 DNA-directed RNA polymerase subunit beta -
  ES300_RS09025 (ES300_09515) murA 1781441..1782724 (-) 1284 WP_238123463.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  ES300_RS09030 (ES300_09520) - 1782748..1782978 (-) 231 WP_000250393.1 DUF1146 family protein -
  ES300_RS09035 (ES300_09525) sepM 1783036..1784073 (-) 1038 WP_000727268.1 SepM family pheromone-processing serine protease Regulator
  ES300_RS09040 (ES300_09530) coaD 1784057..1784545 (-) 489 WP_001280727.1 pantetheine-phosphate adenylyltransferase -
  ES300_RS09045 (ES300_09535) rsmD 1784535..1785074 (-) 540 WP_000706957.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ES300_RS09050 (ES300_09540) asnA 1785139..1786131 (-) 993 WP_000747993.1 aspartate--ammonia ligase -
  ES300_RS09055 (ES300_09550) - 1786242..1786925 (-) 684 WP_001016913.1 Bax inhibitor-1/YccA family protein -
  ES300_RS09060 (ES300_09555) - 1786981..1787721 (-) 741 WP_000152704.1 RNA methyltransferase -
  ES300_RS09065 (ES300_09560) - 1787755..1788033 (+) 279 WP_001174613.1 acylphosphatase -
  ES300_RS09070 (ES300_09565) yidC 1788111..1789037 (+) 927 WP_000835941.1 membrane protein insertase YidC -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37551.60 Da        Isoelectric Point: 5.0724

>NTDB_id=352568 ES300_RS09035 WP_000727268.1 1783036..1784073(-) (sepM) [Streptococcus pneumoniae strain TVO_1901944]
MKKKIRWPLYVIAALIVTFLAFVVPLPYYIEVPGGSEDIRQVLKINDTEDKEAGAYQFVTVGVQHATLAHMIYAWLTPFT
DIRSAQETTGGSSDVEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYFGVYVLNVTDNSTFKGILNISDTVTAVNDQTF
DSSKDLIDYVSSQKLGDSVKVTYEEDGQTKSAEGKIITLENGKNGIGIGLIDRTEVISNVPISFSTAGIGGPSAGLMFSL
AIYTQIAHPDLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVASARAGAAIFFAPDNPVSEEEQKAHPDAKNNYQTALEAAK
TIKTDMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=352568 ES300_RS09035 WP_000727268.1 1783036..1784073(-) (sepM) [Streptococcus pneumoniae strain TVO_1901944]
ATGAAAAAAAAGATTAGATGGCCCTTATACGTCATTGCGGCCTTGATTGTGACTTTCTTGGCATTTGTAGTGCCCTTGCC
TTATTATATAGAGGTTCCAGGTGGTTCGGAAGATATTCGCCAAGTCCTTAAAATAAATGACACAGAAGATAAGGAAGCTG
GTGCCTATCAATTCGTTACGGTTGGTGTTCAACATGCCACTTTAGCTCATATGATTTATGCTTGGTTGACACCTTTTACA
GATATTCGTAGTGCTCAGGAGACTACAGGTGGTTCTTCCGATGTTGAATTTATGCGAATCAATCAATTCTACATGCAAAC
ATCGCAAAATATGGCCAAGTATCAAGGACTAAAAACAGCTGGTAAGGATATCGAACTCAAGTACTTTGGAGTTTATGTTT
TGAATGTGACGGATAATTCAACCTTTAAAGGGATTCTCAATATCTCTGATACAGTCACAGCAGTCAATGATCAGACCTTT
GATAGTTCCAAAGACTTGATTGATTACGTCAGTTCTCAAAAATTAGGGGATTCCGTCAAGGTCACCTATGAAGAGGATGG
GCAAACCAAGTCTGCAGAAGGAAAGATTATCACCTTGGAAAATGGCAAAAATGGAATTGGAATCGGCTTGATTGACCGTA
CAGAGGTAATCAGCAATGTCCCAATTAGCTTTTCAACAGCTGGTATTGGCGGTCCAAGTGCTGGTCTCATGTTTAGTCTA
GCTATCTATACTCAAATAGCTCACCCAGATCTTCGTAATGGTCGTATTGTTGCCGGTACAGGTACCATTGACCGCGATGG
TAATGTGGGAGACATTGGAGGTATTGATAAGAAGGTTGTAGCTTCGGCTAGGGCAGGTGCTGCTATTTTCTTTGCTCCTG
ATAACCCTGTTAGCGAAGAAGAACAAAAGGCGCATCCGGACGCGAAAAACAACTACCAAACAGCCCTAGAAGCGGCTAAA
ACAATCAAGACGGATATGAAAATCGTGCCCGTTAAAACCCTACAAGATGCGATTGATTACTTGAAAAACAATCCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0U0L8C3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

59.357

99.13

0.588


Multiple sequence alignment