Detailed information    

insolico Bioinformatically predicted

Overview


Name   recP/tkt   Type   Machinery gene
Locus tag   GII78_RS09665 Genome accession   NZ_CP045824
Coordinates   1918538..1920541 (+) Length   667 a.a.
NCBI ID   WP_003231593.1    Uniprot ID   -
Organism   Bacillus subtilis strain MB8_B10     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1913538..1925541
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII78_RS09630 (GII78_09630) pghL 1913903..1914661 (+) 759 WP_003245793.1 gamma-polyglutamate hydrolase PghL -
  GII78_RS09635 (GII78_09635) - 1914688..1915137 (-) 450 WP_003245454.1 YndM family protein -
  GII78_RS09640 (GII78_09640) fosM 1915345..1915779 (+) 435 WP_003231604.1 FosM family fosfomycin resistance protein -
  GII78_RS22220 - 1915688..1915964 (+) 277 Protein_1856 hypothetical protein -
  GII78_RS09645 (GII78_09645) dinR/lexA 1916316..1916933 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  GII78_RS09650 (GII78_09650) yneA 1917083..1917400 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  GII78_RS09655 (GII78_09655) dinL 1917419..1918072 (+) 654 WP_015714011.1 recombinase family protein -
  GII78_RS09660 (GII78_09660) ynzC 1918136..1918369 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  GII78_RS09665 (GII78_09665) recP/tkt 1918538..1920541 (+) 2004 WP_003231593.1 transketolase Machinery gene
  GII78_RS09670 (GII78_09670) sirA 1920694..1921140 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  GII78_RS09675 (GII78_09675) yneF 1921226..1921444 (+) 219 WP_003221221.1 YneF family protein -
  GII78_RS09680 (GII78_09680) ynzD 1921518..1921691 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  GII78_RS09685 (GII78_09685) ccdA 1921911..1922618 (+) 708 WP_003231585.1 cytochrome c-type biogenesis protein CcdA -
  GII78_RS09690 (GII78_09690) yneI 1922707..1923069 (+) 363 WP_003245707.1 response regulator -
  GII78_RS09695 (GII78_09695) yneJ 1923148..1923639 (+) 492 WP_010886519.1 CcdC family protein -
  GII78_RS09700 (GII78_09700) yneK 1923670..1924098 (-) 429 WP_003231580.1 DynA interaction protein YneK -
  GII78_RS09705 (GII78_09705) cotM 1924332..1924724 (-) 393 WP_010886520.1 outer spore coat protein CotM -
  GII78_RS09710 (GII78_09710) sspP 1924805..1924951 (-) 147 WP_003221237.1 small acid-soluble spore protein P -
  GII78_RS09715 (GII78_09715) sspO 1924983..1925129 (-) 147 WP_003244839.1 acid-soluble spore protein SspO -

Sequence


Protein


Download         Length: 667 a.a.        Molecular weight: 72316.39 Da        Isoelectric Point: 4.7291

>NTDB_id=347724 GII78_RS09665 WP_003231593.1 1918538..1920541(+) (recP/tkt) [Bacillus subtilis strain MB8_B10]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSPANPGWFNRDRFVLSAGHGSALLYSMLHLSG
FDLSIEDLKGFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLQLGRLIVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNNIEELTAAIEKARQNEKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGKEESKLTKEAYAWTYEEDFYVPSEVYEHFAAAVKESGEKKEQEWNAQFAKYKE
VYPELAEQLELAIKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGLAKKIPFFVGGSADLAGSNKTTIKNAGDFTAVDY
SGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLAALMGLPVTYVFTHDSIAVGEDGPTHEPVEQLA
SLRAMPNLSLIRPADGNETAAAWKLAVQSTDHPTALVLTRQNLPTIDQTSEEALAGVEKGAYVVSKSKNETPDALLIASG
SEVGLAIEAQAELAKENIDVSVVSMPSMDRFEKQSDEYKNEVLPADVKKRLAIEMGSSFGWGKYTGLEGDVLGIDRFGAS
APGETIINEYGFSVPNVVNRVKALINK

Nucleotide


Download         Length: 2004 bp        

>NTDB_id=347724 GII78_RS09665 WP_003231593.1 1918538..1920541(+) (recP/tkt) [Bacillus subtilis strain MB8_B10]
ATGGATACAATTGAAAAGAAATCAGTTGCTACCATTCGCACACTGTCAATAGACGCTATTGAAAAAGCAAATTCTGGTCA
CCCAGGGATGCCGATGGGAGCCGCTCCAATGGCATACACGCTGTGGACAAAATTTATGAACGTAAGTCCGGCAAACCCTG
GCTGGTTTAACCGTGACCGTTTTGTTTTATCTGCTGGACACGGGTCAGCACTATTATACAGCATGCTTCATTTAAGCGGG
TTTGATCTTAGTATTGAAGATCTTAAGGGATTCCGCCAGTGGGGCAGCAAAACACCAGGACATCCGGAATTCGGACATAC
TGCCGGTGTTGATGCTACAACAGGTCCGCTTGGCCAAGGAATTGCCATGGCAGTCGGTATGGCAATTGCTGAACGCCATT
TAGCGGAAACATACAACCGCGATTCATTTAACGTAGTCGATCATTATACATACAGTATTTGCGGTGATGGTGATTTAATG
GAAGGTATTTCTTCTGAAGCCGCTTCACTCGCAGGCCATCTTCAGCTTGGCCGTCTGATCGTACTATACGATTCTAATGA
CATCTCTCTTGATGGAGACCTCGACCGTTCATTCTCTGAAAACGTGAAACAGCGTTTTGAAGCAATGAATTGGGAAGTTC
TTTATGTTGAGGATGGAAACAATATTGAAGAATTAACAGCGGCTATCGAAAAAGCACGCCAAAATGAAAAGAAACCTACA
TTAATTGAAGTGAAAACGACAATCGGATTCGGTTCACCTAACCGTGCCGGTACATCCGGTGTTCACGGTGCGCCGCTTGG
TAAAGAAGAAAGCAAATTAACAAAAGAAGCTTACGCGTGGACATATGAAGAAGACTTCTACGTTCCGTCAGAAGTTTATG
AGCATTTCGCTGCAGCTGTTAAAGAATCAGGTGAGAAAAAAGAACAAGAATGGAATGCTCAATTCGCTAAATATAAAGAA
GTTTATCCTGAACTTGCTGAACAGCTTGAACTGGCAATCAAAGGAGAGCTTCCGAAGGACTGGGATCAAGAGGTTCCTGT
GTATGAAAAAGGAAGCAGTTTGGCATCCCGTGCATCTTCCGGTGAAGTTCTCAACGGACTTGCGAAAAAAATTCCTTTCT
TTGTCGGAGGTTCTGCTGACCTAGCGGGATCGAACAAAACGACTATTAAAAATGCCGGTGATTTTACAGCGGTTGATTAC
TCAGGCAAAAACTTCTGGTTTGGTGTACGTGAATTTGCGATGGGTGCGGCCTTAAACGGTATGGCGCTTCATGGCGGTCT
TCGTGTATTCGGCGGAACTTTCTTTGTCTTCTCTGATTACCTGCGTCCTGCGATTCGCCTTGCAGCGTTAATGGGCCTTC
CTGTGACATATGTCTTCACACATGACAGTATTGCGGTTGGTGAAGACGGTCCGACGCACGAGCCTGTTGAACAGCTTGCT
TCACTCCGTGCGATGCCTAACCTTTCTTTGATCCGTCCAGCAGACGGCAATGAGACAGCAGCAGCATGGAAGCTTGCAGT
GCAAAGCACTGACCACCCAACAGCGCTAGTGCTTACACGTCAAAACCTTCCTACCATCGATCAAACATCTGAAGAAGCAT
TGGCAGGAGTAGAAAAAGGTGCATATGTCGTTTCTAAATCTAAAAACGAAACACCTGACGCTCTTCTCATCGCTTCCGGA
TCAGAGGTAGGTCTTGCAATTGAAGCGCAGGCTGAATTGGCAAAAGAAAATATCGATGTTTCTGTTGTCAGCATGCCTTC
AATGGACCGTTTTGAGAAACAATCTGATGAATACAAAAACGAAGTCCTTCCTGCAGATGTGAAAAAACGTCTTGCAATTG
AAATGGGCTCATCATTTGGATGGGGCAAATACACGGGGCTTGAAGGTGACGTTCTCGGCATAGACCGATTCGGTGCATCT
GCTCCTGGTGAAACCATCATTAACGAATACGGCTTCTCAGTTCCGAACGTAGTGAATCGAGTTAAGGCATTAATCAATAA
GTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

56.647

99.25

0.562


Multiple sequence alignment