Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   GII78_RS09645 Genome accession   NZ_CP045824
Coordinates   1916316..1916933 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain MB8_B10     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1911316..1921933
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII78_RS09620 (GII78_09620) yndJ 1911635..1913275 (+) 1641 WP_003231612.1 YndJ family protein -
  GII78_RS09625 (GII78_09625) - 1913363..1913677 (+) 315 WP_003245621.1 hypothetical protein -
  GII78_RS09630 (GII78_09630) pghL 1913903..1914661 (+) 759 WP_003245793.1 gamma-polyglutamate hydrolase PghL -
  GII78_RS09635 (GII78_09635) - 1914688..1915137 (-) 450 WP_003245454.1 YndM family protein -
  GII78_RS09640 (GII78_09640) fosM 1915345..1915779 (+) 435 WP_003231604.1 FosM family fosfomycin resistance protein -
  GII78_RS22220 - 1915688..1915964 (+) 277 Protein_1856 hypothetical protein -
  GII78_RS09645 (GII78_09645) dinR/lexA 1916316..1916933 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  GII78_RS09650 (GII78_09650) yneA 1917083..1917400 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  GII78_RS09655 (GII78_09655) dinL 1917419..1918072 (+) 654 WP_015714011.1 recombinase family protein -
  GII78_RS09660 (GII78_09660) ynzC 1918136..1918369 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  GII78_RS09665 (GII78_09665) recP/tkt 1918538..1920541 (+) 2004 WP_003231593.1 transketolase Machinery gene
  GII78_RS09670 (GII78_09670) sirA 1920694..1921140 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  GII78_RS09675 (GII78_09675) yneF 1921226..1921444 (+) 219 WP_003221221.1 YneF family protein -
  GII78_RS09680 (GII78_09680) ynzD 1921518..1921691 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=347723 GII78_RS09645 WP_003238209.1 1916316..1916933(-) (dinR/lexA) [Bacillus subtilis strain MB8_B10]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=347723 GII78_RS09645 WP_003238209.1 1916316..1916933(-) (dinR/lexA) [Bacillus subtilis strain MB8_B10]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GACTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCAGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment