Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   SALIVB_RS07645 Genome accession   NC_015760
Coordinates   1687739..1688545 (-) Length   268 a.a.
NCBI ID   WP_013991003.1    Uniprot ID   -
Organism   Streptococcus salivarius CCHSS3     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1682739..1693545
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SALIVB_RS07615 (SALIVB_1590) - 1683497..1684075 (-) 579 WP_004183046.1 HD domain-containing protein -
  SALIVB_RS07620 (SALIVB_1591) - 1684092..1684748 (-) 657 WP_013991000.1 glucosaminidase domain-containing protein -
  SALIVB_RS07625 (SALIVB_1592) - 1684839..1685180 (-) 342 WP_002886165.1 P-II family nitrogen regulator -
  SALIVB_RS07630 (SALIVB_1593) - 1685191..1686426 (-) 1236 WP_013991001.1 ammonium transporter -
  SALIVB_RS07635 (SALIVB_1594) rsmI 1686563..1687429 (-) 867 WP_013991002.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  SALIVB_RS07640 (SALIVB_1595) yabA 1687432..1687752 (-) 321 WP_002887582.1 DNA replication initiation control protein YabA -
  SALIVB_RS07645 (SALIVB_1596) yaaT 1687739..1688545 (-) 807 WP_013991003.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  SALIVB_RS07650 (SALIVB_1597) - 1688542..1689417 (-) 876 WP_013991004.1 DNA polymerase III subunit delta' -
  SALIVB_RS07655 (SALIVB_1598) tmk 1689426..1690055 (-) 630 WP_013991005.1 dTMP kinase -
  SALIVB_RS07665 (SALIVB_1600) recP/tkt 1690345..1692330 (-) 1986 WP_013991006.1 transketolase Machinery gene
  SALIVB_RS07670 (SALIVB_1601) tpiA 1692596..1693354 (-) 759 WP_002885895.1 triose-phosphate isomerase -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29743.13 Da        Isoelectric Point: 4.6503

>NTDB_id=34226 SALIVB_RS07645 WP_013991003.1 1687739..1688545(-) (yaaT) [Streptococcus salivarius CCHSS3]
MTEVIGIKFEETGAVEYVVPDKNYAKDDFVVVLEKKDKRLAQVVMENTDFPEVSLPADLNRVEGLAGEKDFARYDENLLK
AEKSMGVVAELIAQNQLDMKVVDIVFPLNNSYVLISFVAEKRVDFRQLLKDLASYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKASYPDLGDEIETKDGTGQVVAIDVI
AGTIKVVFEKGRAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=34226 SALIVB_RS07645 WP_013991003.1 1687739..1688545(-) (yaaT) [Streptococcus salivarius CCHSS3]
ATGACAGAAGTCATTGGAATAAAATTTGAAGAAACTGGAGCAGTAGAATACGTTGTTCCTGATAAAAATTACGCCAAAGA
TGACTTTGTAGTCGTTTTGGAGAAAAAAGATAAGCGCCTAGCCCAGGTTGTCATGGAAAACACAGATTTTCCTGAGGTTA
GTTTGCCTGCGGATTTGAATCGGGTTGAAGGATTGGCAGGAGAGAAAGATTTTGCTAGATATGATGAAAATCTTTTGAAG
GCTGAAAAGAGTATGGGAGTAGTGGCTGAATTAATTGCTCAAAATCAGCTAGATATGAAGGTGGTTGATATTGTCTTTCC
GCTAAATAACTCTTATGTGTTAATCAGTTTTGTAGCTGAAAAACGGGTAGATTTTCGTCAGTTGCTCAAAGATCTGGCTT
CTTACTTTAAGACACGCATTGAGTTACGTCAGATTTCAAGTCGTGAGGAATCAAAAATCTATGGTGGCTTAGGACCTTGT
GGCCGGGCACTTTGTTGTTCTAGTTTTTTGGGTGAATTCCCACCAGTATCGATTAAGATGGCTAAAAATCAGAGTTTATC
TTTGAATTCTGGTAAGATGAATGGGGTCTGTGGTCGACTTATGTGTTGTCTCAGTTATGAAGATGACTTTTACCGAGATA
GCAAGGCTAGTTATCCTGACTTGGGTGATGAAATTGAAACCAAGGATGGCACGGGTCAGGTCGTTGCCATTGATGTGATT
GCAGGGACCATTAAGGTTGTATTTGAAAAAGGGCGTGCGCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

42.322

99.627

0.422

Multiple sequence alignment