Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | GAU_RS13210 | Genome accession | NC_012489 |
| Coordinates | 3011493..3012659 (-) | Length | 388 a.a. |
| NCBI ID | WP_015894380.1 | Uniprot ID | C1AA13 |
| Organism | Gemmatimonas aurantiaca T-27 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3006493..3017659
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GAU_RS21895 (GAU_2565) | - | 3006840..3007973 (+) | 1134 | WP_015894376.1 | sensor histidine kinase | - |
| GAU_RS13200 (GAU_2567) | - | 3009280..3010041 (-) | 762 | WP_041265527.1 | SGNH/GDSL hydrolase family protein | - |
| GAU_RS13205 (GAU_2568) | - | 3010218..3011414 (-) | 1197 | WP_015894379.1 | type II secretion system F family protein | - |
| GAU_RS13210 (GAU_2569) | pilT | 3011493..3012659 (-) | 1167 | WP_015894380.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| GAU_RS13215 (GAU_2570) | - | 3012749..3014590 (-) | 1842 | WP_052574443.1 | GspE/PulE family protein | - |
Sequence
Protein
Download Length: 388 a.a. Molecular weight: 42995.22 Da Isoelectric Point: 7.8932
>NTDB_id=33662 GAU_RS13210 WP_015894380.1 3011493..3012659(-) (pilT) [Gemmatimonas aurantiaca T-27]
MTAPAPSTISLRTLLDEMIERDASDLHVSAGDRPKLRVDGDIVSATVEHVLTPRDTLQLAYSVLTENQKKRFEMEDELDF
SFGIANLSRFRGNVFKQRGCVSMVIRRIPFQIKTFAELQLPQVISSFAERPRGLVLVTGPTGSGKSTTLAAMIDKINTER
RGHIITVEDPIEFIHRHRNCIINQREVGADTKSFASALKYALREDPDVILIGEMRDLETIQAALTIAETGHLVFATLHTN
SAAEAINRIIDVFPSHQQSQVRAQLAFVLEGIITQVLLPRLTGRGRAMAAEILVVTPAIRALIRDDKVHQIYSLMQSGKK
FGMQTMNDALYQLYVSRQVSADECVRLSGDPNEFLRMIGKSPNDDGSGQSSTQNGNRPGDRTMAGAKR
MTAPAPSTISLRTLLDEMIERDASDLHVSAGDRPKLRVDGDIVSATVEHVLTPRDTLQLAYSVLTENQKKRFEMEDELDF
SFGIANLSRFRGNVFKQRGCVSMVIRRIPFQIKTFAELQLPQVISSFAERPRGLVLVTGPTGSGKSTTLAAMIDKINTER
RGHIITVEDPIEFIHRHRNCIINQREVGADTKSFASALKYALREDPDVILIGEMRDLETIQAALTIAETGHLVFATLHTN
SAAEAINRIIDVFPSHQQSQVRAQLAFVLEGIITQVLLPRLTGRGRAMAAEILVVTPAIRALIRDDKVHQIYSLMQSGKK
FGMQTMNDALYQLYVSRQVSADECVRLSGDPNEFLRMIGKSPNDDGSGQSSTQNGNRPGDRTMAGAKR
Nucleotide
Download Length: 1167 bp
>NTDB_id=33662 GAU_RS13210 WP_015894380.1 3011493..3012659(-) (pilT) [Gemmatimonas aurantiaca T-27]
ATGACCGCACCAGCCCCGTCAACCATCTCCCTCCGGACGCTCCTCGACGAAATGATCGAGCGCGATGCGTCCGACCTGCA
CGTCTCGGCCGGCGATCGGCCGAAACTGCGCGTGGACGGAGATATCGTGAGCGCTACGGTGGAGCACGTGCTGACGCCGC
GTGACACGCTGCAGTTGGCATACTCCGTGCTCACCGAAAACCAGAAGAAGCGCTTCGAGATGGAGGACGAGCTCGATTTC
TCGTTCGGCATCGCGAACCTCTCGCGTTTCCGCGGTAATGTGTTCAAGCAACGCGGCTGCGTGAGCATGGTCATCCGGCG
TATCCCGTTCCAGATCAAGACCTTCGCCGAGTTGCAGTTGCCGCAGGTGATCTCGTCGTTTGCCGAACGGCCACGTGGAC
TGGTGCTCGTCACGGGGCCAACCGGCTCCGGCAAGAGCACCACACTGGCCGCCATGATCGACAAGATCAACACGGAACGA
CGTGGCCACATCATCACGGTGGAAGATCCGATCGAGTTCATCCATCGGCACCGCAACTGCATCATCAACCAGCGCGAAGT
GGGCGCCGACACGAAGAGTTTTGCGTCGGCCCTCAAGTACGCGCTACGTGAAGACCCCGATGTCATCCTGATCGGTGAAA
TGCGCGACCTGGAGACCATCCAGGCGGCGCTCACGATCGCCGAAACCGGTCACCTCGTATTTGCCACGCTGCACACGAAC
AGCGCCGCCGAGGCGATCAATCGCATCATTGACGTATTCCCCAGTCATCAGCAGAGCCAGGTACGGGCGCAGCTCGCCTT
TGTGCTCGAAGGCATCATCACGCAGGTGCTGCTGCCCCGGCTCACCGGACGTGGCCGTGCCATGGCGGCCGAGATTCTGG
TGGTCACACCGGCCATCCGGGCGTTGATCCGCGACGACAAGGTGCACCAGATCTACTCGCTCATGCAGTCTGGCAAGAAG
TTCGGCATGCAGACGATGAACGACGCGCTGTATCAGCTCTATGTCTCCCGTCAGGTGAGCGCCGACGAGTGTGTGCGCCT
GTCCGGTGATCCCAACGAGTTCCTGCGCATGATCGGCAAGAGCCCGAACGACGATGGCAGCGGGCAGTCCAGCACACAGA
ACGGCAACCGTCCCGGTGACCGGACGATGGCCGGCGCCAAGCGATAG
ATGACCGCACCAGCCCCGTCAACCATCTCCCTCCGGACGCTCCTCGACGAAATGATCGAGCGCGATGCGTCCGACCTGCA
CGTCTCGGCCGGCGATCGGCCGAAACTGCGCGTGGACGGAGATATCGTGAGCGCTACGGTGGAGCACGTGCTGACGCCGC
GTGACACGCTGCAGTTGGCATACTCCGTGCTCACCGAAAACCAGAAGAAGCGCTTCGAGATGGAGGACGAGCTCGATTTC
TCGTTCGGCATCGCGAACCTCTCGCGTTTCCGCGGTAATGTGTTCAAGCAACGCGGCTGCGTGAGCATGGTCATCCGGCG
TATCCCGTTCCAGATCAAGACCTTCGCCGAGTTGCAGTTGCCGCAGGTGATCTCGTCGTTTGCCGAACGGCCACGTGGAC
TGGTGCTCGTCACGGGGCCAACCGGCTCCGGCAAGAGCACCACACTGGCCGCCATGATCGACAAGATCAACACGGAACGA
CGTGGCCACATCATCACGGTGGAAGATCCGATCGAGTTCATCCATCGGCACCGCAACTGCATCATCAACCAGCGCGAAGT
GGGCGCCGACACGAAGAGTTTTGCGTCGGCCCTCAAGTACGCGCTACGTGAAGACCCCGATGTCATCCTGATCGGTGAAA
TGCGCGACCTGGAGACCATCCAGGCGGCGCTCACGATCGCCGAAACCGGTCACCTCGTATTTGCCACGCTGCACACGAAC
AGCGCCGCCGAGGCGATCAATCGCATCATTGACGTATTCCCCAGTCATCAGCAGAGCCAGGTACGGGCGCAGCTCGCCTT
TGTGCTCGAAGGCATCATCACGCAGGTGCTGCTGCCCCGGCTCACCGGACGTGGCCGTGCCATGGCGGCCGAGATTCTGG
TGGTCACACCGGCCATCCGGGCGTTGATCCGCGACGACAAGGTGCACCAGATCTACTCGCTCATGCAGTCTGGCAAGAAG
TTCGGCATGCAGACGATGAACGACGCGCTGTATCAGCTCTATGTCTCCCGTCAGGTGAGCGCCGACGAGTGTGTGCGCCT
GTCCGGTGATCCCAACGAGTTCCTGCGCATGATCGGCAAGAGCCCGAACGACGATGGCAGCGGGCAGTCCAGCACACAGA
ACGGCAACCGTCCCGGTGACCGGACGATGGCCGGCGCCAAGCGATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.21 |
93.299 |
0.487 |
| pilT | Acinetobacter nosocomialis M2 |
50.729 |
88.402 |
0.448 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
52.266 |
85.309 |
0.446 |
| pilT | Vibrio cholerae strain A1552 |
52.266 |
85.309 |
0.446 |
| pilT | Acinetobacter baumannii D1279779 |
50.437 |
88.402 |
0.446 |
| pilT | Acinetobacter baumannii strain A118 |
50.437 |
88.402 |
0.446 |
| pilT | Acinetobacter baylyi ADP1 |
50.147 |
87.887 |
0.441 |
| pilT | Legionella pneumophila strain ERS1305867 |
53.125 |
82.474 |
0.438 |
| pilT | Legionella pneumophila strain Lp02 |
53.125 |
82.474 |
0.438 |
| pilT | Pseudomonas aeruginosa PAK |
49.254 |
86.34 |
0.425 |
| pilT | Pseudomonas stutzeri DSM 10701 |
49.699 |
85.567 |
0.425 |
| pilT | Neisseria gonorrhoeae MS11 |
49.074 |
83.505 |
0.41 |
| pilT | Neisseria meningitidis 8013 |
49.074 |
83.505 |
0.41 |
| pilU | Vibrio cholerae strain A1552 |
42.896 |
94.33 |
0.405 |
| pilU | Pseudomonas stutzeri DSM 10701 |
42.779 |
94.588 |
0.405 |
| pilU | Acinetobacter baylyi ADP1 |
42.105 |
88.144 |
0.371 |