Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | SULAZ_RS02460 | Genome accession | NC_012438 |
| Coordinates | 455894..456985 (-) | Length | 363 a.a. |
| NCBI ID | WP_012673878.1 | Uniprot ID | - |
| Organism | Sulfurihydrogenibium azorense Az-Fu1 | ||
| Function | mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 450894..461985
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SULAZ_RS02450 (SULAZ_0503) | mnmA | 453552..454607 (-) | 1056 | WP_012674937.1 | tRNA 2-thiouridine(34) synthase MnmA | - |
| SULAZ_RS02455 (SULAZ_0504) | - | 454668..455894 (-) | 1227 | WP_012674863.1 | type II secretion system F family protein | - |
| SULAZ_RS02460 (SULAZ_0505) | pilT | 455894..456985 (-) | 1092 | WP_012673878.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| SULAZ_RS02465 (SULAZ_0506) | - | 456998..458731 (-) | 1734 | WP_012674988.1 | ATPase, T2SS/T4P/T4SS family | - |
| SULAZ_RS02470 (SULAZ_0507) | accC | 458797..460143 (+) | 1347 | WP_012674274.1 | acetyl-CoA carboxylase biotin carboxylase subunit | - |
| SULAZ_RS02475 (SULAZ_0508) | - | 460140..460778 (+) | 639 | WP_012674942.1 | MBL fold metallo-hydrolase | - |
| SULAZ_RS08805 (SULAZ_0509) | - | 460772..461614 (+) | 843 | WP_012673652.1 | deoxyribonuclease IV | - |
Sequence
Protein
Download Length: 363 a.a. Molecular weight: 40705.23 Da Isoelectric Point: 8.4262
>NTDB_id=33106 SULAZ_RS02460 WP_012673878.1 455894..456985(-) (pilT) [Sulfurihydrogenibium azorense Az-Fu1]
METAAPRLSIDEIAKIAVERRASDIHITAGLPPCIRVDGKITPLEMYPPLTPKDSQSLIYSFMNEKQKKTFEENKEIDFS
FGIKGIGRFRVNVYYQRGTVAAALRRIPYEIKSMEELGLIPKVRDLCHLSMGLVLVTGPTGSGKTTTLASMIDYINTNFP
HHIITIEDPIEYVYQHKKSKIAQREVGTDTDSFARALKYALREDPDVILVGEMRDLETIRAALTAAETGHLVFGTLHTNT
AVQTINRIINVFPMEEQDQVRTELSFVLQGVISQRLLPKIGGGRVLIHEVMIPNTAIRNLIRENKIHQIYGLMQTGQAES
GMQTMNQSLLKALKNRLITVEDALKISPEPEELKRMISAAGIR
METAAPRLSIDEIAKIAVERRASDIHITAGLPPCIRVDGKITPLEMYPPLTPKDSQSLIYSFMNEKQKKTFEENKEIDFS
FGIKGIGRFRVNVYYQRGTVAAALRRIPYEIKSMEELGLIPKVRDLCHLSMGLVLVTGPTGSGKTTTLASMIDYINTNFP
HHIITIEDPIEYVYQHKKSKIAQREVGTDTDSFARALKYALREDPDVILVGEMRDLETIRAALTAAETGHLVFGTLHTNT
AVQTINRIINVFPMEEQDQVRTELSFVLQGVISQRLLPKIGGGRVLIHEVMIPNTAIRNLIRENKIHQIYGLMQTGQAES
GMQTMNQSLLKALKNRLITVEDALKISPEPEELKRMISAAGIR
Nucleotide
Download Length: 1092 bp
>NTDB_id=33106 SULAZ_RS02460 WP_012673878.1 455894..456985(-) (pilT) [Sulfurihydrogenibium azorense Az-Fu1]
ATGGAGACAGCAGCTCCCAGATTATCAATAGACGAGATAGCAAAAATTGCAGTAGAAAGAAGAGCTTCGGACATTCATAT
AACTGCAGGTCTTCCTCCTTGTATAAGGGTTGATGGAAAGATAACTCCTCTTGAAATGTATCCTCCTTTAACACCTAAGG
ACTCCCAATCTCTTATATACTCATTTATGAACGAAAAACAAAAAAAGACATTTGAAGAAAATAAAGAAATAGACTTTTCA
TTTGGAATTAAAGGTATAGGAAGGTTTAGGGTAAACGTTTACTATCAAAGAGGCACCGTAGCAGCTGCCTTAAGAAGGAT
ACCCTATGAAATAAAATCAATGGAAGAGCTTGGACTGATACCTAAAGTAAGAGACCTGTGCCATTTATCTATGGGTCTAG
TTTTAGTTACGGGGCCAACAGGTTCGGGAAAAACAACTACATTAGCATCTATGATAGACTACATTAACACAAACTTTCCT
CATCATATTATTACTATAGAAGATCCAATAGAGTATGTATATCAACATAAAAAGTCTAAAATCGCTCAAAGAGAAGTAGG
TACAGACACAGACTCGTTCGCTAGAGCACTAAAGTATGCATTAAGGGAAGACCCAGACGTAATTCTAGTTGGAGAGATGA
GGGATTTAGAAACTATAAGAGCAGCGTTAACAGCTGCTGAAACAGGACACCTTGTATTTGGAACACTTCACACCAATACA
GCCGTCCAAACCATAAACAGAATAATAAACGTTTTTCCAATGGAAGAACAAGACCAAGTAAGAACAGAACTTAGTTTTGT
ATTACAAGGTGTTATATCTCAAAGACTACTACCTAAAATAGGAGGTGGGAGAGTTTTAATTCACGAAGTTATGATACCTA
ACACAGCTATAAGAAACTTAATAAGGGAAAATAAGATACACCAAATATACGGCTTAATGCAAACGGGACAAGCTGAAAGT
GGAATGCAAACTATGAACCAATCACTACTAAAAGCATTAAAAAATAGACTAATCACAGTAGAAGATGCATTAAAAATATC
TCCTGAACCAGAAGAACTAAAAAGAATGATATCAGCTGCAGGGATTAGATAA
ATGGAGACAGCAGCTCCCAGATTATCAATAGACGAGATAGCAAAAATTGCAGTAGAAAGAAGAGCTTCGGACATTCATAT
AACTGCAGGTCTTCCTCCTTGTATAAGGGTTGATGGAAAGATAACTCCTCTTGAAATGTATCCTCCTTTAACACCTAAGG
ACTCCCAATCTCTTATATACTCATTTATGAACGAAAAACAAAAAAAGACATTTGAAGAAAATAAAGAAATAGACTTTTCA
TTTGGAATTAAAGGTATAGGAAGGTTTAGGGTAAACGTTTACTATCAAAGAGGCACCGTAGCAGCTGCCTTAAGAAGGAT
ACCCTATGAAATAAAATCAATGGAAGAGCTTGGACTGATACCTAAAGTAAGAGACCTGTGCCATTTATCTATGGGTCTAG
TTTTAGTTACGGGGCCAACAGGTTCGGGAAAAACAACTACATTAGCATCTATGATAGACTACATTAACACAAACTTTCCT
CATCATATTATTACTATAGAAGATCCAATAGAGTATGTATATCAACATAAAAAGTCTAAAATCGCTCAAAGAGAAGTAGG
TACAGACACAGACTCGTTCGCTAGAGCACTAAAGTATGCATTAAGGGAAGACCCAGACGTAATTCTAGTTGGAGAGATGA
GGGATTTAGAAACTATAAGAGCAGCGTTAACAGCTGCTGAAACAGGACACCTTGTATTTGGAACACTTCACACCAATACA
GCCGTCCAAACCATAAACAGAATAATAAACGTTTTTCCAATGGAAGAACAAGACCAAGTAAGAACAGAACTTAGTTTTGT
ATTACAAGGTGTTATATCTCAAAGACTACTACCTAAAATAGGAGGTGGGAGAGTTTTAATTCACGAAGTTATGATACCTA
ACACAGCTATAAGAAACTTAATAAGGGAAAATAAGATACACCAAATATACGGCTTAATGCAAACGGGACAAGCTGAAAGT
GGAATGCAAACTATGAACCAATCACTACTAAAAGCATTAAAAAATAGACTAATCACAGTAGAAGATGCATTAAAAATATC
TCCTGAACCAGAAGAACTAAAAAGAATGATATCAGCTGCAGGGATTAGATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter baylyi ADP1 |
55.491 |
95.317 |
0.529 |
| pilT | Acinetobacter baumannii D1279779 |
54.913 |
95.317 |
0.523 |
| pilT | Acinetobacter baumannii strain A118 |
54.913 |
95.317 |
0.523 |
| pilT | Acinetobacter nosocomialis M2 |
54.913 |
95.317 |
0.523 |
| pilT | Legionella pneumophila strain Lp02 |
56.928 |
91.46 |
0.521 |
| pilT | Legionella pneumophila strain ERS1305867 |
56.928 |
91.46 |
0.521 |
| pilT | Pseudomonas aeruginosa PAK |
54.335 |
95.317 |
0.518 |
| pilT | Pseudomonas stutzeri DSM 10701 |
53.468 |
95.317 |
0.51 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.13 |
97.521 |
0.499 |
| pilT | Neisseria meningitidis 8013 |
50.862 |
95.868 |
0.488 |
| pilT | Neisseria gonorrhoeae MS11 |
50.862 |
95.868 |
0.488 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
52.96 |
88.43 |
0.468 |
| pilT | Vibrio cholerae strain A1552 |
52.96 |
88.43 |
0.468 |
| pilU | Pseudomonas stutzeri DSM 10701 |
43.875 |
96.694 |
0.424 |
| pilU | Acinetobacter baylyi ADP1 |
40.625 |
96.97 |
0.394 |
| pilU | Vibrio cholerae strain A1552 |
41.124 |
93.113 |
0.383 |