Detailed information NTG0027930

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: PNUC_RS10775
• Genome accession: NC_009379
• Coordinates: 2148880..2149569 (+)
• Length: 229 a.a.
• NCBI ID: WP_011903914.1
• Uniprot ID: -
• Organism: Polynucleobacter asymbioticus QLW-P1DMWA-1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2143880..2154569

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PNUC_RS10755 (Pnuc_2076)	-	2145365..2145946 (-)	582	WP_011903910.1	DUF4390 domain-containing protein	-
PNUC_RS10760 (Pnuc_2077)	rsmB	2145943..2147259 (-)	1317	WP_011903911.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
PNUC_RS10765 (Pnuc_2078)	fmt	2147285..2148283 (-)	999	WP_011903912.1	methionyl-tRNA formyltransferase	-
PNUC_RS10770 (Pnuc_2079)	def	2148293..2148808 (-)	516	WP_011903913.1	peptide deformylase	-
PNUC_RS10775 (Pnuc_2080)	dprA	2148880..2149569 (+)	690	WP_011903914.1	DNA-processing protein DprA	Machinery gene
PNUC_RS10780 (Pnuc_2081)	-	2149774..2152446 (+)	2673	WP_143070093.1	DNA topoisomerase III	-
PNUC_RS11140 (Pnuc_2082)	mnmC	2152506..2153507 (-)	1002	Protein_2124	FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	-

Sequence

Protein

• Length: 229 a.a.
• Molecular weight: 24343.30 Da
• Isoelectric Point: 9.3153

>NTDB_id=27930 PNUC_RS10775 WP_011903914.1 2148880..2149569(+) (dprA) [Polynucleobacter asymbioticus QLW-P1DMWA-1]
MHIPITPKTIQEIQRGSKNYPLRLNDLADPPSCLYIYGNIHLLSAPMVAIVGSRKASMEGLKVSRLFARTLSKAGLLVVS
GLARGIDGAAHTGAMSLGTDYQTAAVCGTGLDMAYPKEHAALANAIGNQGLLISEYPAGTGPKPYHFPRRNRIIAALSLG
VVVIEAAERSGSLITARLAAELGREVFALPGPIYNPLFGGCHQLIQQGAKLARNPDDVLEELIIPKNPF

Nucleotide

• Length: 690 bp

>NTDB_id=27930 PNUC_RS10775 WP_011903914.1 2148880..2149569(+) (dprA) [Polynucleobacter asymbioticus QLW-P1DMWA-1]
ATGCATATCCCGATTACCCCAAAAACCATTCAGGAAATTCAGAGGGGTAGCAAAAATTACCCTCTTAGACTTAACGATCT
GGCAGACCCTCCGTCATGCCTCTATATATACGGGAATATTCACCTCCTGAGCGCTCCCATGGTTGCCATTGTGGGTTCCC
GTAAAGCCAGCATGGAAGGGCTAAAAGTATCTCGTCTATTTGCTAGAACTCTTTCAAAAGCGGGCCTACTCGTTGTTTCT
GGGCTTGCTAGAGGCATTGATGGTGCGGCACACACTGGCGCGATGAGTCTAGGAACCGATTACCAAACAGCAGCAGTATG
TGGCACAGGGCTAGATATGGCCTATCCCAAGGAGCACGCTGCCCTAGCCAATGCGATTGGCAATCAAGGACTCTTAATCT
CTGAATACCCTGCCGGAACCGGCCCAAAACCTTACCATTTTCCCCGACGAAACCGAATCATTGCTGCCCTCTCCTTGGGG
GTAGTTGTCATTGAAGCCGCCGAAAGATCGGGCTCCCTGATTACAGCGCGCCTTGCTGCTGAGCTGGGAAGAGAGGTATT
TGCCCTTCCGGGCCCTATTTACAACCCCCTTTTTGGAGGATGTCATCAACTTATTCAACAGGGAGCTAAATTGGCACGTA
ATCCAGACGATGTCTTAGAAGAGCTTATTATTCCTAAAAACCCATTTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (10-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Legionella pneumophila strain ERS1305867	52.381	91.703	0.48
dprA	Vibrio cholerae strain A1552	54.187	88.646	0.48
dprA	Neisseria meningitidis MC58	50.244	89.52	0.45
dprA	Neisseria meningitidis strain C311	50.244	89.52	0.45
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	50.739	88.646	0.45
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	50.739	88.646	0.45
dprA/cilB/dalA	Streptococcus pneumoniae D39	50.739	88.646	0.45
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	50.739	88.646	0.45
dprA	Vibrio campbellii strain DS40M4	50.739	88.646	0.45
dprA/cilB/dalA	Streptococcus pneumoniae R6	50.739	88.646	0.45
dprA/cilB/dalA	Streptococcus mitis SK321	50.246	88.646	0.445
dprA	Acinetobacter baumannii strain A118	49.275	90.393	0.445
dprA	Streptococcus mutans UA159	49.029	89.956	0.441
dprA	Acinetobacter baumannii D1279779	48.792	90.393	0.441
dprA	Neisseria gonorrhoeae MS11	49.268	89.52	0.441
dprA	Neisseria gonorrhoeae strain FA1090	49.268	89.52	0.441
dprA	Thermus thermophilus HB27	47.17	92.576	0.437
dprA	Acinetobacter baylyi ADP1	47.847	91.266	0.437
dprA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	44.444	98.253	0.437
dprA	Glaesserella parasuis strain SC1401	48.293	89.52	0.432
dprA	Haemophilus influenzae Rd KW20	48.039	89.083	0.428
dprA	Lactococcus lactis subsp. cremoris KW2	48.039	89.083	0.428
dprA	Bacillus subtilis subsp. subtilis str. 168	43.458	93.45	0.406