Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | CXB49_RS20635 | Genome accession | NZ_CP025429 |
| Coordinates | 4631851..4632888 (+) | Length | 345 a.a. |
| NCBI ID | WP_101710107.1 | Uniprot ID | - |
| Organism | Chromobacterium sp. ATCC 53434 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4626851..4637888
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXB49_RS20610 (CXB49_20610) | - | 4627075..4627659 (-) | 585 | WP_101710102.1 | YggT family protein | - |
| CXB49_RS20615 (CXB49_20615) | proC | 4627669..4628472 (-) | 804 | WP_101710103.1 | pyrroline-5-carboxylate reductase | - |
| CXB49_RS20620 (CXB49_20620) | - | 4628522..4629217 (-) | 696 | WP_101710104.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| CXB49_RS20625 (CXB49_20625) | - | 4629472..4629966 (+) | 495 | WP_101710105.1 | molybdopterin-dependent oxidoreductase | - |
| CXB49_RS20630 (CXB49_20630) | - | 4629989..4631710 (+) | 1722 | WP_101710106.1 | hybrid sensor histidine kinase/response regulator | - |
| CXB49_RS20635 (CXB49_20635) | pilT | 4631851..4632888 (+) | 1038 | WP_101710107.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| CXB49_RS20640 (CXB49_20640) | pilU | 4633012..4634148 (+) | 1137 | WP_101710108.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| CXB49_RS20645 (CXB49_20645) | - | 4634174..4635787 (+) | 1614 | WP_101710109.1 | response regulator | - |
| CXB49_RS20650 (CXB49_20650) | - | 4635865..4637478 (+) | 1614 | WP_101710110.1 | response regulator | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 38392.02 Da Isoelectric Point: 6.5044
>NTDB_id=261282 CXB49_RS20635 WP_101710107.1 4631851..4632888(+) (pilT) [Chromobacterium sp. ATCC 53434]
MEISELLAFTVKNKASDLHLSAGLPPMIRVNGDIRRINLPPMDHHDVHDMVYDIMNDYQRKIFEDTFECDFSFELPGIAR
FRVNAFVQNRGMASVFRVIPSKVLSLEQLSAPRIFQEISSYPRGLVLVTGPTGSGKSTTLAAMIDYVNENDFSHILTVED
PIEFVHESKKSLINQRELGLQTHSFSNALKSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAKTIDRI
VDVFPAGEKEMVRSMLSESVRAVIAQTLLKTKDGQGRVAAHEIMMGTPAIRNLIRENKIAQINSMIQTGQQYGMQTLDQC
LSDLVRRNIVSPGEARAKASNKDAF
MEISELLAFTVKNKASDLHLSAGLPPMIRVNGDIRRINLPPMDHHDVHDMVYDIMNDYQRKIFEDTFECDFSFELPGIAR
FRVNAFVQNRGMASVFRVIPSKVLSLEQLSAPRIFQEISSYPRGLVLVTGPTGSGKSTTLAAMIDYVNENDFSHILTVED
PIEFVHESKKSLINQRELGLQTHSFSNALKSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAKTIDRI
VDVFPAGEKEMVRSMLSESVRAVIAQTLLKTKDGQGRVAAHEIMMGTPAIRNLIRENKIAQINSMIQTGQQYGMQTLDQC
LSDLVRRNIVSPGEARAKASNKDAF
Nucleotide
Download Length: 1038 bp
>NTDB_id=261282 CXB49_RS20635 WP_101710107.1 4631851..4632888(+) (pilT) [Chromobacterium sp. ATCC 53434]
ATGGAAATTTCCGAGCTGCTGGCATTCACCGTCAAGAACAAGGCCTCCGACCTGCACCTGTCCGCCGGCCTGCCGCCGAT
GATACGGGTCAACGGCGACATCCGCCGCATCAACCTGCCGCCGATGGACCACCATGACGTGCACGACATGGTGTACGACA
TCATGAACGACTACCAGCGCAAGATATTCGAGGACACCTTCGAATGCGACTTCTCGTTCGAACTGCCCGGCATCGCCCGT
TTCCGCGTCAACGCCTTCGTGCAGAACCGCGGCATGGCCTCGGTGTTCCGGGTGATTCCCAGCAAGGTGCTGTCGCTGGA
GCAGCTGTCGGCGCCGCGCATCTTCCAGGAAATCTCCAGCTACCCGCGCGGCCTGGTGCTGGTGACCGGCCCGACCGGTT
CCGGCAAGTCGACGACGCTGGCGGCGATGATAGACTATGTCAACGAAAACGACTTCTCGCACATTCTTACCGTGGAGGAC
CCGATCGAGTTCGTCCACGAAAGCAAGAAGAGCCTGATCAACCAGCGCGAGCTCGGCCTGCAGACCCACAGCTTCTCCAA
TGCGCTGAAGAGCGCGCTGCGCGAGGACCCGGACGTGATCCTGGTCGGCGAATTGCGCGATCTGGAGACGATACGGCTGG
CGCTGACCGCCGCCGAAACCGGCCACCTGGTGTTCGGTACGCTGCACACCAGCAGCGCCGCCAAGACCATAGACCGGATC
GTCGACGTGTTTCCGGCCGGCGAGAAGGAAATGGTGCGCTCGATGCTGTCGGAATCGGTGCGGGCGGTGATCGCCCAGAC
GCTGTTGAAGACCAAGGACGGCCAGGGCCGGGTGGCGGCGCACGAGATCATGATGGGCACGCCGGCGATACGCAATCTGA
TCCGCGAGAACAAGATCGCCCAGATCAACTCGATGATACAAACCGGTCAGCAATACGGCATGCAGACGCTGGACCAGTGC
CTGTCGGACCTGGTGCGCCGCAATATCGTGTCGCCGGGCGAGGCCCGCGCCAAGGCCAGCAACAAGGACGCCTTCTAG
ATGGAAATTTCCGAGCTGCTGGCATTCACCGTCAAGAACAAGGCCTCCGACCTGCACCTGTCCGCCGGCCTGCCGCCGAT
GATACGGGTCAACGGCGACATCCGCCGCATCAACCTGCCGCCGATGGACCACCATGACGTGCACGACATGGTGTACGACA
TCATGAACGACTACCAGCGCAAGATATTCGAGGACACCTTCGAATGCGACTTCTCGTTCGAACTGCCCGGCATCGCCCGT
TTCCGCGTCAACGCCTTCGTGCAGAACCGCGGCATGGCCTCGGTGTTCCGGGTGATTCCCAGCAAGGTGCTGTCGCTGGA
GCAGCTGTCGGCGCCGCGCATCTTCCAGGAAATCTCCAGCTACCCGCGCGGCCTGGTGCTGGTGACCGGCCCGACCGGTT
CCGGCAAGTCGACGACGCTGGCGGCGATGATAGACTATGTCAACGAAAACGACTTCTCGCACATTCTTACCGTGGAGGAC
CCGATCGAGTTCGTCCACGAAAGCAAGAAGAGCCTGATCAACCAGCGCGAGCTCGGCCTGCAGACCCACAGCTTCTCCAA
TGCGCTGAAGAGCGCGCTGCGCGAGGACCCGGACGTGATCCTGGTCGGCGAATTGCGCGATCTGGAGACGATACGGCTGG
CGCTGACCGCCGCCGAAACCGGCCACCTGGTGTTCGGTACGCTGCACACCAGCAGCGCCGCCAAGACCATAGACCGGATC
GTCGACGTGTTTCCGGCCGGCGAGAAGGAAATGGTGCGCTCGATGCTGTCGGAATCGGTGCGGGCGGTGATCGCCCAGAC
GCTGTTGAAGACCAAGGACGGCCAGGGCCGGGTGGCGGCGCACGAGATCATGATGGGCACGCCGGCGATACGCAATCTGA
TCCGCGAGAACAAGATCGCCCAGATCAACTCGATGATACAAACCGGTCAGCAATACGGCATGCAGACGCTGGACCAGTGC
CTGTCGGACCTGGTGCGCCGCAATATCGTGTCGCCGGGCGAGGCCCGCGCCAAGGCCAGCAACAAGGACGCCTTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter nosocomialis M2 |
71.884 |
100 |
0.719 |
| pilT | Acinetobacter baumannii D1279779 |
71.884 |
100 |
0.719 |
| pilT | Acinetobacter baumannii strain A118 |
71.884 |
100 |
0.719 |
| pilT | Neisseria gonorrhoeae MS11 |
71.304 |
100 |
0.713 |
| pilT | Neisseria meningitidis 8013 |
71.304 |
100 |
0.713 |
| pilT | Pseudomonas aeruginosa PAK |
71.304 |
100 |
0.713 |
| pilT | Pseudomonas stutzeri DSM 10701 |
71.304 |
100 |
0.713 |
| pilT | Legionella pneumophila strain Lp02 |
70.725 |
100 |
0.707 |
| pilT | Legionella pneumophila strain ERS1305867 |
70.725 |
100 |
0.707 |
| pilT | Acinetobacter baylyi ADP1 |
70.145 |
100 |
0.701 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
66.568 |
97.971 |
0.652 |
| pilT | Vibrio cholerae strain A1552 |
66.568 |
97.971 |
0.652 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.266 |
95.942 |
0.501 |
| pilU | Acinetobacter baylyi ADP1 |
40.882 |
98.551 |
0.403 |
| pilU | Pseudomonas stutzeri DSM 10701 |
42.593 |
93.913 |
0.4 |
| pilU | Vibrio cholerae strain A1552 |
41.194 |
97.101 |
0.4 |