Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | PCRYO_RS01530 | Genome accession | NC_007969 |
| Coordinates | 351251..352303 (-) | Length | 350 a.a. |
| NCBI ID | WP_011512665.1 | Uniprot ID | Q1QE26 |
| Organism | Psychrobacter cryohalolentis K5 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 346251..357303
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PCRYO_RS01505 (Pcryo_0288) | - | 347124..348266 (+) | 1143 | WP_011512660.1 | hypothetical protein | - |
| PCRYO_RS01510 (Pcryo_0289) | - | 348254..348658 (+) | 405 | WP_011512661.1 | RnfH family protein | - |
| PCRYO_RS01515 (Pcryo_0290) | - | 348684..349100 (-) | 417 | WP_011512662.1 | outer membrane protein assembly factor BamE | - |
| PCRYO_RS01520 (Pcryo_0291) | fur | 349425..349859 (+) | 435 | WP_011512663.1 | ferric iron uptake transcriptional regulator | - |
| PCRYO_RS01525 (Pcryo_0292) | pilU | 349971..351092 (-) | 1122 | WP_011512664.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| PCRYO_RS01530 (Pcryo_0293) | pilT | 351251..352303 (-) | 1053 | WP_011512665.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| PCRYO_RS01535 (Pcryo_0294) | - | 352623..353381 (+) | 759 | WP_041752932.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| PCRYO_RS01540 (Pcryo_0295) | - | 353600..354874 (-) | 1275 | WP_011512667.1 | hemolysin family protein | - |
| PCRYO_RS01545 (Pcryo_0296) | - | 355132..356835 (-) | 1704 | WP_011512668.1 | NAD+ synthase | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 39105.95 Da Isoelectric Point: 6.6711
>NTDB_id=25763 PCRYO_RS01530 WP_011512665.1 351251..352303(-) (pilT) [Psychrobacter cryohalolentis K5]
MAEQNLSIEDLLRFTVKHKASDLHISAGMPAMIRVDGEMTRINMPDMSHKVVHQLIYDIMNDRQRADFEEFFETDFSFEI
PNLARFRVNAFNQNRGAGAVFRTIPSKVLTMEDLGMGEVFKRVSDFKRGVVLVTGPTGSGKSTTLAAMIDYINETRKEHI
LTIEDPIEFVHESKKSLINQREVHRDTLGFEPALRSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAK
TIDRVIDVFPAAEKDMIRAMLSESLQAVISQTLLRRQTGGRIAAHEIMLGTPAIRNLIRENKIAQMYSSIQTGAGDGMIT
LDQTLKNLVARGTISKDVARPYAKQPEAFL
MAEQNLSIEDLLRFTVKHKASDLHISAGMPAMIRVDGEMTRINMPDMSHKVVHQLIYDIMNDRQRADFEEFFETDFSFEI
PNLARFRVNAFNQNRGAGAVFRTIPSKVLTMEDLGMGEVFKRVSDFKRGVVLVTGPTGSGKSTTLAAMIDYINETRKEHI
LTIEDPIEFVHESKKSLINQREVHRDTLGFEPALRSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAK
TIDRVIDVFPAAEKDMIRAMLSESLQAVISQTLLRRQTGGRIAAHEIMLGTPAIRNLIRENKIAQMYSSIQTGAGDGMIT
LDQTLKNLVARGTISKDVARPYAKQPEAFL
Nucleotide
Download Length: 1053 bp
>NTDB_id=25763 PCRYO_RS01530 WP_011512665.1 351251..352303(-) (pilT) [Psychrobacter cryohalolentis K5]
ATGGCTGAACAAAATTTAAGCATTGAAGACTTGCTGCGTTTTACTGTCAAGCATAAGGCTTCAGATTTACATATTTCAGC
CGGTATGCCTGCGATGATTCGAGTTGATGGTGAGATGACTCGGATTAATATGCCAGATATGAGCCATAAGGTAGTTCATC
AGCTCATTTATGACATCATGAATGATAGACAACGTGCCGACTTTGAAGAGTTTTTTGAAACGGATTTTTCTTTTGAGATT
CCAAATCTAGCCCGTTTTCGGGTAAACGCATTTAATCAAAATCGCGGTGCAGGCGCCGTCTTTCGTACAATTCCTTCCAA
AGTTCTAACGATGGAAGATCTAGGTATGGGCGAAGTGTTTAAGCGTGTTTCAGACTTTAAACGTGGCGTGGTGTTGGTCA
CTGGTCCAACCGGCTCAGGTAAGTCGACCACGCTAGCTGCCATGATTGATTATATCAATGAAACCCGTAAAGAGCATATT
TTGACTATCGAAGACCCGATTGAATTTGTTCATGAGTCCAAAAAGAGTTTGATTAACCAGCGTGAAGTCCATCGCGATAC
CTTGGGGTTCGAGCCAGCATTGCGCTCAGCGTTACGTGAAGATCCGGACGTTATTCTGGTTGGTGAGCTACGAGATCTTG
AGACCATACGCTTAGCGCTCACTGCCGCTGAAACCGGTCACTTAGTTTTCGGCACTTTGCACACCAGTTCCGCTGCCAAA
ACCATTGACCGTGTTATTGACGTCTTCCCTGCTGCTGAAAAAGACATGATTCGAGCGATGCTATCAGAGTCACTACAAGC
CGTTATCTCGCAAACATTGTTACGTCGTCAAACAGGCGGGCGAATTGCCGCCCATGAGATTATGTTAGGTACGCCCGCTA
TTCGTAACTTAATACGAGAAAATAAAATCGCTCAAATGTACTCTTCTATCCAAACTGGTGCTGGTGATGGCATGATTACT
CTTGATCAAACTCTTAAAAATCTTGTAGCGAGAGGCACAATTAGTAAAGACGTTGCACGACCTTACGCTAAACAGCCTGA
AGCATTCTTATAA
ATGGCTGAACAAAATTTAAGCATTGAAGACTTGCTGCGTTTTACTGTCAAGCATAAGGCTTCAGATTTACATATTTCAGC
CGGTATGCCTGCGATGATTCGAGTTGATGGTGAGATGACTCGGATTAATATGCCAGATATGAGCCATAAGGTAGTTCATC
AGCTCATTTATGACATCATGAATGATAGACAACGTGCCGACTTTGAAGAGTTTTTTGAAACGGATTTTTCTTTTGAGATT
CCAAATCTAGCCCGTTTTCGGGTAAACGCATTTAATCAAAATCGCGGTGCAGGCGCCGTCTTTCGTACAATTCCTTCCAA
AGTTCTAACGATGGAAGATCTAGGTATGGGCGAAGTGTTTAAGCGTGTTTCAGACTTTAAACGTGGCGTGGTGTTGGTCA
CTGGTCCAACCGGCTCAGGTAAGTCGACCACGCTAGCTGCCATGATTGATTATATCAATGAAACCCGTAAAGAGCATATT
TTGACTATCGAAGACCCGATTGAATTTGTTCATGAGTCCAAAAAGAGTTTGATTAACCAGCGTGAAGTCCATCGCGATAC
CTTGGGGTTCGAGCCAGCATTGCGCTCAGCGTTACGTGAAGATCCGGACGTTATTCTGGTTGGTGAGCTACGAGATCTTG
AGACCATACGCTTAGCGCTCACTGCCGCTGAAACCGGTCACTTAGTTTTCGGCACTTTGCACACCAGTTCCGCTGCCAAA
ACCATTGACCGTGTTATTGACGTCTTCCCTGCTGCTGAAAAAGACATGATTCGAGCGATGCTATCAGAGTCACTACAAGC
CGTTATCTCGCAAACATTGTTACGTCGTCAAACAGGCGGGCGAATTGCCGCCCATGAGATTATGTTAGGTACGCCCGCTA
TTCGTAACTTAATACGAGAAAATAAAATCGCTCAAATGTACTCTTCTATCCAAACTGGTGCTGGTGATGGCATGATTACT
CTTGATCAAACTCTTAAAAATCTTGTAGCGAGAGGCACAATTAGTAAAGACGTTGCACGACCTTACGCTAAACAGCCTGA
AGCATTCTTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter baumannii strain A118 |
79.42 |
98.571 |
0.783 |
| pilT | Acinetobacter baumannii D1279779 |
79.42 |
98.571 |
0.783 |
| pilT | Acinetobacter nosocomialis M2 |
79.13 |
98.571 |
0.78 |
| pilT | Pseudomonas stutzeri DSM 10701 |
77.907 |
98.286 |
0.766 |
| pilT | Pseudomonas aeruginosa PAK |
77.907 |
98.286 |
0.766 |
| pilT | Acinetobacter baylyi ADP1 |
76.163 |
98.286 |
0.749 |
| pilT | Legionella pneumophila strain Lp02 |
72.093 |
98.286 |
0.709 |
| pilT | Legionella pneumophila strain ERS1305867 |
72.093 |
98.286 |
0.709 |
| pilT | Neisseria meningitidis 8013 |
64.638 |
98.571 |
0.637 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
67.781 |
94 |
0.637 |
| pilT | Vibrio cholerae strain A1552 |
67.781 |
94 |
0.637 |
| pilT | Neisseria gonorrhoeae MS11 |
64.058 |
98.571 |
0.631 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.445 |
98.857 |
0.509 |
| pilU | Acinetobacter baylyi ADP1 |
41.399 |
98 |
0.406 |
| pilU | Vibrio cholerae strain A1552 |
43.344 |
92.286 |
0.4 |
| pilU | Pseudomonas stutzeri DSM 10701 |
41.003 |
96.857 |
0.397 |