Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | YHS_RS08195 | Genome accession | NZ_CP024176 |
| Coordinates | 1875782..1876831 (+) | Length | 349 a.a. |
| NCBI ID | WP_007117194.1 | Uniprot ID | - |
| Organism | Moraxella osloensis strain YHS | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1870782..1881831
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| YHS_RS08175 (YHS_08185) | truD | 1871027..1872115 (+) | 1089 | WP_099834327.1 | tRNA pseudouridine(13) synthase TruD | - |
| YHS_RS08180 (YHS_08190) | - | 1872152..1873501 (-) | 1350 | WP_065253303.1 | sensor domain-containing diguanylate cyclase | - |
| YHS_RS08185 (YHS_08195) | - | 1873853..1874377 (-) | 525 | WP_007117192.1 | C40 family peptidase | - |
| YHS_RS08190 (YHS_08200) | - | 1874803..1875528 (-) | 726 | WP_198510417.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| YHS_RS08195 (YHS_08205) | pilT | 1875782..1876831 (+) | 1050 | WP_007117194.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| YHS_RS08200 (YHS_08210) | pilU | 1876881..1878032 (+) | 1152 | WP_099808389.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| YHS_RS08205 (YHS_08215) | - | 1878103..1878627 (-) | 525 | WP_096489254.1 | GNAT family N-acetyltransferase | - |
| YHS_RS08210 (YHS_08220) | ribF | 1878753..1879766 (+) | 1014 | WP_099834328.1 | riboflavin biosynthesis protein RibF | - |
Sequence
Protein
Download Length: 349 a.a. Molecular weight: 38916.62 Da Isoelectric Point: 6.7822
>NTDB_id=252783 YHS_RS08195 WP_007117194.1 1875782..1876831(+) (pilT) [Moraxella osloensis strain YHS]
MAKELSIDDLLRFAFKNKASDLHISAGLPPMIRVDGEITKINMPPLDHQKVHSLIYDIMNDKQRADYEEFFETDFSFEIP
NVARFRVNAFNQNRGAGAVFRTIPSEVLTMEQLGMGPIFEKISNYKRGVVLVTGPTGSGKSTTLAAMINYINETRKEHIL
TIEDPIEFVHQSKKSLINQREVHRDTLSFDAALRSALREDPDVILVGEMRDLETIRLALTAAETGHLVFGTLHTSSAAKT
IDRVVDVFPAAEKDMIRAMLSESLQAVISQSLLKRQAGGRVAAHEIMIGTPAIRNLIRENKVAQMYSAIQTSAGDGMTTL
DQSLRELVNKGVISKESARQYAKQPENFM
MAKELSIDDLLRFAFKNKASDLHISAGLPPMIRVDGEITKINMPPLDHQKVHSLIYDIMNDKQRADYEEFFETDFSFEIP
NVARFRVNAFNQNRGAGAVFRTIPSEVLTMEQLGMGPIFEKISNYKRGVVLVTGPTGSGKSTTLAAMINYINETRKEHIL
TIEDPIEFVHQSKKSLINQREVHRDTLSFDAALRSALREDPDVILVGEMRDLETIRLALTAAETGHLVFGTLHTSSAAKT
IDRVVDVFPAAEKDMIRAMLSESLQAVISQSLLKRQAGGRVAAHEIMIGTPAIRNLIRENKVAQMYSAIQTSAGDGMTTL
DQSLRELVNKGVISKESARQYAKQPENFM
Nucleotide
Download Length: 1050 bp
>NTDB_id=252783 YHS_RS08195 WP_007117194.1 1875782..1876831(+) (pilT) [Moraxella osloensis strain YHS]
ATGGCAAAGGAATTATCGATTGACGATTTGTTGCGTTTTGCATTCAAAAATAAAGCCTCTGACTTACACATTTCAGCAGG
CTTACCGCCGATGATTCGGGTAGATGGTGAAATCACCAAAATCAACATGCCGCCGCTTGATCACCAAAAAGTGCATAGTT
TGATTTATGACATCATGAACGACAAACAACGTGCCGATTATGAAGAGTTTTTTGAAACCGATTTTTCGTTTGAAATTCCC
AATGTGGCGCGCTTTCGTGTCAATGCCTTTAACCAAAACCGGGGCGCAGGTGCGGTATTTCGTACCATTCCATCTGAGGT
ATTGACGATGGAACAGCTTGGTATGGGACCGATTTTTGAGAAAATCTCTAACTACAAACGCGGCGTGGTACTGGTCACAG
GTCCAACGGGTTCGGGTAAGTCAACAACCCTTGCGGCGATGATTAACTATATTAATGAAACCCGTAAAGAACATATCTTA
ACCATCGAAGACCCGATTGAATTTGTGCATCAATCAAAAAAATCCCTCATCAACCAACGGGAAGTCCACCGTGATACCTT
AAGCTTTGATGCTGCGCTGCGCTCTGCCCTACGTGAAGACCCTGATGTTATTCTTGTCGGTGAGATGCGTGACCTTGAGA
CCATCCGCTTGGCATTGACGGCTGCTGAAACAGGACACTTGGTATTTGGGACATTGCATACCTCATCTGCTGCCAAAACC
ATTGACCGTGTGGTCGACGTGTTCCCCGCCGCCGAAAAAGACATGATTCGAGCGATGTTATCTGAGTCGCTGCAAGCGGT
TATCTCGCAGTCGCTACTCAAACGCCAAGCGGGTGGTCGTGTCGCCGCGCATGAAATTATGATTGGTACGCCTGCGATTC
GTAACTTGATTCGTGAAAACAAAGTCGCCCAAATGTACTCTGCCATCCAAACCAGTGCAGGCGATGGTATGACCACACTC
GATCAAAGCCTTCGCGAGTTGGTCAATAAGGGCGTGATTAGCAAAGAATCGGCGCGCCAATATGCCAAACAACCTGAAAA
TTTTATGTGA
ATGGCAAAGGAATTATCGATTGACGATTTGTTGCGTTTTGCATTCAAAAATAAAGCCTCTGACTTACACATTTCAGCAGG
CTTACCGCCGATGATTCGGGTAGATGGTGAAATCACCAAAATCAACATGCCGCCGCTTGATCACCAAAAAGTGCATAGTT
TGATTTATGACATCATGAACGACAAACAACGTGCCGATTATGAAGAGTTTTTTGAAACCGATTTTTCGTTTGAAATTCCC
AATGTGGCGCGCTTTCGTGTCAATGCCTTTAACCAAAACCGGGGCGCAGGTGCGGTATTTCGTACCATTCCATCTGAGGT
ATTGACGATGGAACAGCTTGGTATGGGACCGATTTTTGAGAAAATCTCTAACTACAAACGCGGCGTGGTACTGGTCACAG
GTCCAACGGGTTCGGGTAAGTCAACAACCCTTGCGGCGATGATTAACTATATTAATGAAACCCGTAAAGAACATATCTTA
ACCATCGAAGACCCGATTGAATTTGTGCATCAATCAAAAAAATCCCTCATCAACCAACGGGAAGTCCACCGTGATACCTT
AAGCTTTGATGCTGCGCTGCGCTCTGCCCTACGTGAAGACCCTGATGTTATTCTTGTCGGTGAGATGCGTGACCTTGAGA
CCATCCGCTTGGCATTGACGGCTGCTGAAACAGGACACTTGGTATTTGGGACATTGCATACCTCATCTGCTGCCAAAACC
ATTGACCGTGTGGTCGACGTGTTCCCCGCCGCCGAAAAAGACATGATTCGAGCGATGTTATCTGAGTCGCTGCAAGCGGT
TATCTCGCAGTCGCTACTCAAACGCCAAGCGGGTGGTCGTGTCGCCGCGCATGAAATTATGATTGGTACGCCTGCGATTC
GTAACTTGATTCGTGAAAACAAAGTCGCCCAAATGTACTCTGCCATCCAAACCAGTGCAGGCGATGGTATGACCACACTC
GATCAAAGCCTTCGCGAGTTGGTCAATAAGGGCGTGATTAGCAAAGAATCGGCGCGCCAATATGCCAAACAACCTGAAAA
TTTTATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter nosocomialis M2 |
80 |
98.854 |
0.791 |
| pilT | Acinetobacter baumannii D1279779 |
80 |
98.854 |
0.791 |
| pilT | Acinetobacter baumannii strain A118 |
80 |
98.854 |
0.791 |
| pilT | Pseudomonas aeruginosa PAK |
77.616 |
98.567 |
0.765 |
| pilT | Pseudomonas stutzeri DSM 10701 |
77.326 |
98.567 |
0.762 |
| pilT | Acinetobacter baylyi ADP1 |
76.744 |
98.567 |
0.756 |
| pilT | Legionella pneumophila strain Lp02 |
74.26 |
96.848 |
0.719 |
| pilT | Legionella pneumophila strain ERS1305867 |
74.26 |
96.848 |
0.719 |
| pilT | Neisseria meningitidis 8013 |
67.536 |
98.854 |
0.668 |
| pilT | Neisseria gonorrhoeae MS11 |
67.246 |
98.854 |
0.665 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
68.976 |
95.129 |
0.656 |
| pilT | Vibrio cholerae strain A1552 |
68.976 |
95.129 |
0.656 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.436 |
100 |
0.524 |
| pilU | Acinetobacter baylyi ADP1 |
41.329 |
99.14 |
0.41 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.708 |
97.135 |
0.395 |
| pilU | Vibrio cholerae strain A1552 |
40 |
95.989 |
0.384 |