Detailed information NTG0252784

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: YHS_RS08200
• Genome accession: NZ_CP024176
• Coordinates: 1876881..1878032 (+)
• Length: 383 a.a.
• NCBI ID: WP_099808389.1
• Uniprot ID: -
• Organism: Moraxella osloensis strain YHS
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1871881..1883032

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
YHS_RS08180 (YHS_08190)	-	1872152..1873501 (-)	1350	WP_065253303.1	sensor domain-containing diguanylate cyclase	-
YHS_RS08185 (YHS_08195)	-	1873853..1874377 (-)	525	WP_007117192.1	C40 family peptidase	-
YHS_RS08190 (YHS_08200)	-	1874803..1875528 (-)	726	WP_198510417.1	YggS family pyridoxal phosphate-dependent enzyme	-
YHS_RS08195 (YHS_08205)	pilT	1875782..1876831 (+)	1050	WP_007117194.1	type IV pilus twitching motility protein PilT	Machinery gene
YHS_RS08200 (YHS_08210)	pilU	1876881..1878032 (+)	1152	WP_099808389.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
YHS_RS08205 (YHS_08215)	-	1878103..1878627 (-)	525	WP_096489254.1	GNAT family N-acetyltransferase	-
YHS_RS08210 (YHS_08220)	ribF	1878753..1879766 (+)	1014	WP_099834328.1	riboflavin biosynthesis protein RibF	-

Sequence

Protein

• Length: 383 a.a.
• Molecular weight: 42675.96 Da
• Isoelectric Point: 5.9759

>NTDB_id=252784 YHS_RS08200 WP_099808389.1 1876881..1878032(+) (pilU) [Moraxella osloensis strain YHS]
MDLDKLLQLMIQKNGSDLFITADAPISMKVNGTIAPVTKSALTPEQSMTLVKSVMTPAQSKEFDDTLECQFAIVDKNQTA
RFRVSAFVQKDCAGMVLRKIETKIPTVEHLNLPPILNEIAMKKRGIVLLVGATGTGKSTTLAAMMGYRNENSRGHIITIE
DPIEYLHEHKGCIITQREVGIDTKSFEAGLKNALRQAPDVILIGEIRTRETMDYAIQYAETGHLVFATLHATNANQALER
IIHFFEAKHHEQILMDLSLNLRAIVAQQLIATPDGKGRRPAIEILLNSQLIGDYIRKGEIHEIKPVMKRSREIGMQTFDQ
ALFDLYENGDITYRDAIQHADSPNDLRLLIKLESKSANKTEESELELSLQSDDNSAANDNAIS

Nucleotide

• Length: 1152 bp

>NTDB_id=252784 YHS_RS08200 WP_099808389.1 1876881..1878032(+) (pilU) [Moraxella osloensis strain YHS]
ATGGATCTTGATAAATTACTGCAGCTAATGATACAAAAAAACGGCTCCGACCTTTTTATCACCGCCGATGCGCCCATATC
AATGAAAGTCAATGGTACTATCGCGCCAGTCACCAAGTCAGCGCTGACCCCAGAGCAATCAATGACGCTGGTCAAAAGCG
TGATGACGCCTGCTCAAAGCAAAGAGTTTGACGACACCCTAGAATGCCAGTTTGCCATTGTTGACAAAAACCAAACCGCA
CGCTTTCGTGTTTCTGCCTTTGTCCAAAAAGACTGTGCGGGCATGGTGCTACGTAAAATTGAAACCAAAATCCCCACGGT
AGAGCACCTCAATCTACCACCGATTTTGAATGAAATTGCCATGAAAAAACGCGGCATCGTGCTACTAGTCGGCGCGACAG
GTACAGGTAAATCTACCACACTGGCAGCTATGATGGGGTATCGCAACGAAAATTCGCGCGGCCATATCATTACTATCGAA
GACCCGATTGAATACCTGCATGAACATAAAGGCTGTATCATCACCCAACGCGAAGTTGGCATTGATACCAAGTCATTTGA
AGCAGGATTAAAAAACGCCCTACGTCAAGCACCTGATGTGATTTTGATTGGCGAGATTCGTACCCGCGAAACCATGGATT
ATGCCATTCAATATGCTGAAACAGGACACTTGGTGTTTGCCACCCTACACGCCACCAATGCCAACCAAGCGCTTGAGCGT
ATTATTCACTTCTTTGAAGCAAAACATCACGAGCAGATTTTGATGGATTTATCATTGAACCTTCGAGCCATTGTGGCGCA
GCAATTGATTGCTACCCCTGATGGCAAAGGTCGCCGCCCTGCGATTGAAATTTTGCTCAATTCGCAACTGATTGGTGATT
ACATCCGTAAAGGGGAAATCCACGAAATTAAGCCTGTCATGAAACGTTCCCGTGAAATTGGGATGCAAACCTTTGACCAA
GCGTTGTTTGATTTGTATGAAAATGGCGACATCACTTACCGCGATGCCATCCAACACGCTGATTCACCCAACGATTTACG
CCTACTTATTAAGCTAGAGAGTAAATCGGCCAATAAAACCGAGGAAAGCGAGCTGGAGCTCTCACTGCAATCTGATGATA
ATAGCGCAGCCAATGACAATGCAATATCCTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (10-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	63.564	98.172	0.624
pilU	Acinetobacter baylyi ADP1	64.345	93.734	0.603
pilU	Vibrio cholerae strain A1552	55.84	91.645	0.512
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	41.311	91.645	0.379
pilT	Acinetobacter baumannii strain A118	40.525	89.556	0.363
pilT	Acinetobacter nosocomialis M2	40.525	89.556	0.363
pilT	Acinetobacter baumannii D1279779	40.525	89.556	0.363
pilT	Legionella pneumophila strain Lp02	40.588	88.773	0.36
pilT	Legionella pneumophila strain ERS1305867	40.588	88.773	0.36