Detailed information NTG0024102

Bioinformatically predicted

Overview

• Name: pilA2
• Type: Machinery gene
• Locus tag: EBN1_RS00025
• Genome accession: NC_006513
• Coordinates: 2251..2685 (-)
• Length: 144 a.a.
• NCBI ID: WP_011235867.1
• Uniprot ID: -
• Organism: Aromatoleum aromaticum EbN1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1..7685

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EBN1_RS00005 (ebB253)	-	2..412 (-)	411	WP_011235864.1	helix-turn-helix domain-containing protein	-
EBN1_RS00010 (EB_RS24780)	-	487..1176 (+)	690	WP_011235865.1	S24 family peptidase	-
EBN1_RS00015 (EB_RS00015)	-	1244..1549 (+)	306	WP_041645316.1	hypothetical protein	-
EBN1_RS00020 (EB_RS00020)	-	1572..2120 (+)	549	WP_011235866.1	hypothetical protein	-
EBN1_RS00025 (EB_RS00025)	pilA2	2251..2685 (-)	435	WP_011235867.1	pilin	Machinery gene
EBN1_RS00030 (EB_RS00030)	-	2899..3441 (+)	543	WP_011235868.1	SEL1-like repeat protein	-
EBN1_RS00035 (EB_RS00035)	-	3680..4150 (-)	471	WP_041645318.1	hypothetical protein	-
EBN1_RS00040 (EB_RS00040)	-	4346..4651 (+)	306	WP_049780123.1	hypothetical protein	-
EBN1_RS00045 (EB_RS00045)	-	4686..4889 (+)	204	WP_041645320.1	hypothetical protein	-
EBN1_RS00050 (EB_RS00050)	-	4947..5297 (+)	351	WP_011235870.1	hypothetical protein	-
EBN1_RS00055 (EB_RS00055)	-	5335..6183 (+)	849	WP_011235871.1	YfdQ family protein	-
EBN1_RS00060 (EB_RS00060)	-	6188..6592 (+)	405	WP_049780124.1	DUF6378 domain-containing protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 14410.51 Da
• Isoelectric Point: 4.4883

>NTDB_id=24102 EBN1_RS00025 WP_011235867.1 2251..2685(-) (pilA2) [Aromatoleum aromaticum EbN1]
MKKVQQGFTLIELMIVVAIIGILAAVALPAYQDYTIRAQVSELMSLTDGAKVAVAETFQSTGALPASDAAAGYGGAVGKY
TASVAIGPSGVITSTGGVDANDAIAAETITLTPKADATGVLVWACAGSVDAKYRPSTCRAAAAE

Nucleotide

• Length: 435 bp

>NTDB_id=24102 EBN1_RS00025 WP_011235867.1 2251..2685(-) (pilA2) [Aromatoleum aromaticum EbN1]
ATGAAAAAGGTCCAACAAGGTTTCACGCTGATCGAACTGATGATCGTCGTCGCGATCATCGGGATTTTGGCAGCGGTCGC
GCTGCCGGCGTATCAGGATTACACGATCCGGGCTCAGGTTTCAGAACTGATGTCCCTGACAGATGGCGCCAAGGTTGCCG
TTGCTGAAACTTTTCAGTCGACTGGCGCCCTCCCTGCCAGTGATGCCGCTGCGGGCTACGGTGGTGCCGTGGGTAAGTAC
ACCGCCAGCGTCGCAATCGGACCAAGCGGCGTCATTACATCGACCGGCGGCGTAGATGCAAACGACGCGATTGCCGCAGA
GACGATCACGCTGACGCCTAAGGCCGACGCAACTGGCGTGCTAGTGTGGGCGTGCGCCGGATCTGTGGACGCGAAGTATC
GCCCGTCGACCTGCCGGGCGGCGGCAGCGGAATAA

Domains

Predicted by InterproScan.

• Pilin (bacterial filament) (Pilin) (37-139)

• Prokaryotic N-terminal methylation motif (N_methyl) (3-28)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA2	Legionella pneumophila str. Paris	55.474	95.139	0.528
pilA2	Legionella pneumophila strain ERS1305867	54.745	95.139	0.521
pilE	Neisseria gonorrhoeae MS11	41.071	100	0.479
pilE	Neisseria elongata subsp. glycolytica ATCC 29315	35.638	100	0.465
pilA/pilA1	Eikenella corrodens VA1	42.138	100	0.465
pilE	Neisseria gonorrhoeae strain FA1090	40.881	100	0.451
comP	Acinetobacter baylyi ADP1	44.138	100	0.444
pilA	Ralstonia pseudosolanacearum GMI1000	39.024	100	0.444
pilA	Acinetobacter baumannii strain A118	39.041	100	0.396
pilA/pilAI	Pseudomonas stutzeri DSM 10701	39.007	97.917	0.382
pilA	Vibrio cholerae strain A1552	35.065	100	0.375
pilA	Vibrio cholerae O1 biovar El Tor strain E7946	35.065	100	0.375
pilA	Vibrio cholerae C6706	35.065	100	0.375
pilA/pilAII	Pseudomonas stutzeri DSM 10701	37.241	100	0.375
pilA	Glaesserella parasuis strain SC1401	37.063	99.306	0.368
pilA	Vibrio parahaemolyticus RIMD 2210633	40.458	90.972	0.368
pilA	Haemophilus influenzae Rd KW20	36.364	99.306	0.361