Detailed information NTG0223007

Bioinformatically predicted

Overview

• Name: comR/comR2
• Type: Regulator
• Locus tag: A6J72_RS06340
• Genome accession: NZ_CP020433
• Coordinates: 1264446..1264919 (+)
• Length: 157 a.a.
• NCBI ID: WP_003075555.1
• Uniprot ID: -
• Organism: Streptococcus intermedius strain FDAARGOS_233
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 1259446..1269919

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6J72_RS06300 (A6J72_06310)	-	1260236..1260874 (+)	639	WP_009569575.1	adenylate kinase	-
A6J72_RS06305 (A6J72_06315)	infA	1260990..1261208 (+)	219	WP_001029883.1	translation initiation factor IF-1	-
A6J72_RS06310 (A6J72_06320)	rpmJ	1261233..1261349 (+)	117	WP_001808836.1	50S ribosomal protein L36	-
A6J72_RS06315 (A6J72_06325)	rpsM	1261365..1261730 (+)	366	WP_002262317.1	30S ribosomal protein S13	-
A6J72_RS06320 (A6J72_06330)	rpsK	1261750..1262133 (+)	384	WP_001118385.1	30S ribosomal protein S11	-
A6J72_RS06325 (A6J72_06335)	-	1262178..1263116 (+)	939	WP_003077134.1	DNA-directed RNA polymerase subunit alpha	-
A6J72_RS06330 (A6J72_06340)	rplQ	1263128..1263514 (+)	387	WP_003075160.1	50S ribosomal protein L17	-
A6J72_RS06340 (A6J72_06350)	comR/comR2	1264446..1264919 (+)	474	WP_003075555.1	transcriptional regulator	Regulator

Sequence

Protein

• Length: 157 a.a.
• Molecular weight: 19418.37 Da
• Isoelectric Point: 8.0146

>NTDB_id=223007 A6J72_RS06340 WP_003075555.1 1264446..1264919(+) (comR/comR2) [Streptococcus intermedius strain FDAARGOS_233]
MDFKELYEKVRGIVLKCRREYYVHLWELSDWDQEGMMVLYELVSRHPYLVEEEAHLYVYYKTKFRNHIKDILRKQESQKR
KLDRQVYEEVSEIGHKLSLKGLYLDELVILRDQLKSYQKQLSPAQQEQYERLLADERFKGRQAMLRELRTYLKDYEM

Nucleotide

• Length: 474 bp

>NTDB_id=223007 A6J72_RS06340 WP_003075555.1 1264446..1264919(+) (comR/comR2) [Streptococcus intermedius strain FDAARGOS_233]
ATGGATTTCAAGGAGTTATATGAGAAAGTAAGGGGAATTGTGCTGAAGTGTCGGCGGGAATATTATGTCCATCTGTGGGA
GCTAAGCGATTGGGACCAAGAAGGGATGATGGTCTTGTATGAGTTGGTGAGTCGTCACCCCTATTTGGTAGAGGAAGAAG
CCCATCTCTATGTCTACTATAAGACAAAGTTTCGGAATCACATAAAGGATATTCTGCGCAAACAAGAAAGTCAAAAGCGC
AAACTGGATCGCCAAGTGTATGAAGAGGTAAGTGAGATTGGGCACAAGTTAAGTCTGAAAGGTCTGTATCTAGACGAGTT
GGTAATACTCCGCGATCAATTAAAGTCCTATCAAAAGCAACTGAGTCCCGCCCAGCAAGAGCAGTATGAGCGGTTACTGG
CAGATGAAAGGTTCAAAGGCCGCCAAGCGATGCTTCGAGAGTTACGAACCTACTTAAAAGACTATGAGATGTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	60.645	98.726	0.599
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	60.645	98.726	0.599
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	56.129	98.726	0.554
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	54.839	98.726	0.541
comX/comX2	Streptococcus pneumoniae Rx1	54.194	98.726	0.535
comX/comX1	Streptococcus pneumoniae Rx1	54.194	98.726	0.535
comX/comX2	Streptococcus pneumoniae D39	54.194	98.726	0.535
comX/comX1	Streptococcus pneumoniae D39	54.194	98.726	0.535
comX/comX2	Streptococcus pneumoniae R6	54.194	98.726	0.535
comX/comX1	Streptococcus pneumoniae R6	54.194	98.726	0.535
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	54.194	98.726	0.535
comX/comX1	Streptococcus pneumoniae TIGR4	53.548	98.726	0.529
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	53.548	98.726	0.529
comX/comX2	Streptococcus pneumoniae TIGR4	53.548	98.726	0.529
comX/sigX	Streptococcus mutans UA159	50	98.089	0.49
comX/sigX	Streptococcus suis isolate S10	49.677	98.726	0.49
comX/sigX	Streptococcus suis D9	49.677	98.726	0.49
comX/sigX	Streptococcus suis P1/7	49.677	98.726	0.49
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	43.226	98.726	0.427
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	43.226	98.726	0.427
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	43.226	98.726	0.427
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	43.226	98.726	0.427
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	43.226	98.726	0.427
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	43.226	98.726	0.427
comX	Streptococcus salivarius SK126	42.857	98.089	0.42
comX/sigX	Streptococcus salivarius strain HSISS4	42.208	98.089	0.414
comX	Streptococcus thermophilus LMG 18311	42.208	98.089	0.414
comX	Streptococcus thermophilus LMD-9	42.208	98.089	0.414
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	39.744	99.363	0.395