Detailed information NTG0223000

Bioinformatically predicted

Overview

• Name: comR/comR2
• Type: Regulator
• Locus tag: A6J72_RS05330
• Genome accession: NZ_CP020433
• Coordinates: 1069085..1069558 (-)
• Length: 157 a.a.
• NCBI ID: WP_003075555.1
• Uniprot ID: -
• Organism: Streptococcus intermedius strain FDAARGOS_233
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 1064085..1074558

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6J72_RS05330 (A6J72_05345)	comR/comR2	1069085..1069558 (-)	474	WP_003075555.1	transcriptional regulator	Regulator
A6J72_RS05335 (A6J72_05350)	-	1069879..1072641 (-)	2763	WP_105255929.1	sialidase domain-containing protein	-

Sequence

Protein

• Length: 157 a.a.
• Molecular weight: 19418.37 Da
• Isoelectric Point: 8.0146

>NTDB_id=223000 A6J72_RS05330 WP_003075555.1 1069085..1069558(-) (comR/comR2) [Streptococcus intermedius strain FDAARGOS_233]
MDFKELYEKVRGIVLKCRREYYVHLWELSDWDQEGMMVLYELVSRHPYLVEEEAHLYVYYKTKFRNHIKDILRKQESQKR
KLDRQVYEEVSEIGHKLSLKGLYLDELVILRDQLKSYQKQLSPAQQEQYERLLADERFKGRQAMLRELRTYLKDYEM

Nucleotide

• Length: 474 bp

>NTDB_id=223000 A6J72_RS05330 WP_003075555.1 1069085..1069558(-) (comR/comR2) [Streptococcus intermedius strain FDAARGOS_233]
ATGGATTTCAAGGAGTTATATGAGAAAGTAAGGGGAATTGTGCTGAAGTGTCGGCGGGAATATTATGTCCATCTGTGGGA
GCTAAGCGATTGGGACCAAGAAGGGATGATGGTCTTGTATGAGTTGGTGAGTCGTCACCCCTATTTGGTAGAGGAAGAAG
CCCATCTCTATGTCTACTATAAGACAAAGTTTCGGAATCACATAAAGGATATTCTGCGCAAACAAGAAAGTCAAAAGCGC
AAACTGGATCGCCAAGTGTATGAAGAGGTAAGTGAGATTGGGCACAAGTTAAGTCTGAAAGGTCTGTATCTAGACGAGTT
GGTAATACTCCGCGATCAATTAAAGTCCTATCAAAAGCAACTGAGTCCCGCCCAGCAAGAGCAGTATGAGCGGTTACTGG
CAGATGAAAGGTTCAAAGGCCGCCAAGCGATGCTTCGAGAGTTACGAACCTACTTAAAAGACTATGAGATGTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	60.645	98.726	0.599
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	60.645	98.726	0.599
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	56.129	98.726	0.554
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	54.839	98.726	0.541
comX/comX2	Streptococcus pneumoniae Rx1	54.194	98.726	0.535
comX/comX1	Streptococcus pneumoniae Rx1	54.194	98.726	0.535
comX/comX2	Streptococcus pneumoniae D39	54.194	98.726	0.535
comX/comX1	Streptococcus pneumoniae D39	54.194	98.726	0.535
comX/comX2	Streptococcus pneumoniae R6	54.194	98.726	0.535
comX/comX1	Streptococcus pneumoniae R6	54.194	98.726	0.535
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	54.194	98.726	0.535
comX/comX1	Streptococcus pneumoniae TIGR4	53.548	98.726	0.529
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	53.548	98.726	0.529
comX/comX2	Streptococcus pneumoniae TIGR4	53.548	98.726	0.529
comX/sigX	Streptococcus mutans UA159	50	98.089	0.49
comX/sigX	Streptococcus suis isolate S10	49.677	98.726	0.49
comX/sigX	Streptococcus suis D9	49.677	98.726	0.49
comX/sigX	Streptococcus suis P1/7	49.677	98.726	0.49
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	43.226	98.726	0.427
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	43.226	98.726	0.427
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	43.226	98.726	0.427
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	43.226	98.726	0.427
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	43.226	98.726	0.427
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	43.226	98.726	0.427
comX	Streptococcus salivarius SK126	42.857	98.089	0.42
comX/sigX	Streptococcus salivarius strain HSISS4	42.208	98.089	0.414
comX	Streptococcus thermophilus LMG 18311	42.208	98.089	0.414
comX	Streptococcus thermophilus LMD-9	42.208	98.089	0.414
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	39.744	99.363	0.395