Detailed information NTG0220196

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: B4603_RS08275
• Genome accession: NZ_CP020019
• Coordinates: 1644314..1644625 (-)
• Length: 103 a.a.
• NCBI ID: WP_000472256.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain 08S00974
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1639314..1649625

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B4603_RS08240	gcvPA	1639816..1641162 (-)	1347	WP_000019698.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
B4603_RS08245	gcvT	1641182..1642273 (-)	1092	WP_000093349.1	glycine cleavage system aminomethyltransferase GcvT	-
B4603_RS08250	-	1642432..1642956 (-)	525	WP_001015120.1	shikimate kinase	-
B4603_RS08255	-	1642946..1643092 (-)	147	WP_001789879.1	hypothetical protein	-
B4603_RS08260	comGF	1643189..1643686 (-)	498	WP_001825340.1	competence type IV pilus minor pilin ComGF	Machinery gene
B4603_RS08265	comGE	1643604..1643903 (-)	300	WP_000844413.1	hypothetical protein	Machinery gene
B4603_RS08270	comGD	1643890..1644336 (-)	447	WP_001796473.1	competence type IV pilus minor pilin ComGD	Machinery gene
B4603_RS08275	comGC	1644314..1644625 (-)	312	WP_000472256.1	competence type IV pilus major pilin ComGC	Machinery gene
B4603_RS08280	comGB	1644639..1645709 (-)	1071	WP_000776425.1	competence type IV pilus assembly protein ComGB	Machinery gene
B4603_RS08285	comGA	1645681..1646655 (-)	975	WP_000697220.1	competence type IV pilus ATPase ComGA	Machinery gene
B4603_RS08290	-	1646707..1647330 (-)	624	WP_001223008.1	MBL fold metallo-hydrolase	-
B4603_RS08295	-	1647327..1647656 (-)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
B4603_RS08300	-	1647656..1648642 (-)	987	WP_000161315.1	ROK family glucokinase	-
B4603_RS08305	-	1648639..1648842 (-)	204	WP_000087559.1	YqgQ family protein	-

Sequence

Protein

• Length: 103 a.a.
• Molecular weight: 11315.36 Da
• Isoelectric Point: 8.5268

>NTDB_id=220196 B4603_RS08275 WP_000472256.1 1644314..1644625(-) (comGC) [Staphylococcus aureus strain 08S00974]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN

Nucleotide

• Length: 312 bp

>NTDB_id=220196 B4603_RS08275 WP_000472256.1 1644314..1644625(-) (comGC) [Staphylococcus aureus strain 08S00974]
ATGTTTAAATTTCTAAAAAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTATTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (6-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	100	100	1
comGC	Staphylococcus aureus N315	100	100	1
comGC/cglC	Streptococcus pneumoniae TIGR4	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae Rx1	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae D39	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae R6	46.078	99.029	0.456
comGC/cglC	Streptococcus mitis SK321	51.163	83.495	0.427
comGC/cglC	Streptococcus mitis NCTC 12261	51.163	83.495	0.427
comYC	Streptococcus gordonii str. Challis substr. CH1	42.857	95.146	0.408
comYC	Streptococcus suis isolate S10	50	75.728	0.379
comGC	Bacillus subtilis subsp. subtilis str. 168	41.758	88.35	0.369
comGC	Lactococcus lactis subsp. cremoris KW2	46.341	79.612	0.369