Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   CFP59_RS23070 Genome accession   NZ_CP025018
Coordinates   5568847..5569254 (+) Length   135 a.a.
NCBI ID   WP_100806677.1    Uniprot ID   -
Organism   Streptomyces sp. M56     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 5563847..5574254
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CFP59_RS23030 (CFP59_04544) - 5564356..5564658 (-) 303 WP_100806671.1 hypothetical protein -
  CFP59_RS23035 (CFP59_04545) - 5564683..5564877 (-) 195 WP_069875105.1 hypothetical protein -
  CFP59_RS23040 (CFP59_04546) - 5564893..5565078 (-) 186 WP_100806672.1 mobile element transfer protein -
  CFP59_RS23045 (CFP59_04547) - 5565090..5565716 (-) 627 WP_100806673.1 DUF2637 domain-containing protein -
  CFP59_RS23050 (CFP59_04548) - 5565740..5565949 (-) 210 WP_100806674.1 hypothetical protein -
  CFP59_RS23055 (CFP59_04549) - 5566017..5567408 (-) 1392 WP_100806675.1 FtsK/SpoIIIE domain-containing protein -
  CFP59_RS23060 - 5567414..5567764 (-) 351 Protein_4533 hypothetical protein -
  CFP59_RS23065 (CFP59_04551) - 5567950..5568735 (-) 786 WP_100806676.1 GntR family transcriptional regulator -
  CFP59_RS23070 (CFP59_04552) mutX 5568847..5569254 (+) 408 WP_100806677.1 NUDIX domain-containing protein Machinery gene
  CFP59_RS23075 (CFP59_04553) - 5569300..5569725 (+) 426 WP_100806678.1 ATP-binding protein -
  CFP59_RS23080 (CFP59_04554) - 5569857..5570132 (+) 276 WP_231981363.1 hypothetical protein -
  CFP59_RS23085 (CFP59_04555) - 5570501..5573371 (-) 2871 WP_231981783.1 NACHT domain-containing protein -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14579.69 Da        Isoelectric Point: 4.6492

>NTDB_id=216091 CFP59_RS23070 WP_100806677.1 5568847..5569254(+) (mutX) [Streptomyces sp. M56]
MSVAGVIVDDAGRALLIKRRDNGKWEPPGGVLERGETIPDALQREVLEETGIKIALPATLTGVYKNMTGLIVSMVFRCEA
IDGAPTTGAETRALRWVTRDEVTELADEAYAIRVLDALDNTSPPAVRAHDGVRLI

Nucleotide


Download         Length: 408 bp        

>NTDB_id=216091 CFP59_RS23070 WP_100806677.1 5568847..5569254(+) (mutX) [Streptomyces sp. M56]
GTGAGCGTCGCCGGAGTCATCGTCGACGACGCTGGCCGTGCGCTGCTGATCAAGCGACGGGACAACGGTAAGTGGGAACC
GCCCGGCGGCGTGCTCGAACGCGGGGAAACCATCCCCGACGCCTTGCAACGGGAAGTCCTCGAAGAGACCGGCATCAAGA
TCGCGCTTCCCGCGACCCTCACCGGCGTCTACAAGAACATGACCGGCCTGATCGTCTCCATGGTCTTCCGCTGCGAGGCC
ATCGACGGCGCCCCGACGACGGGAGCGGAGACCCGCGCACTGCGCTGGGTCACCCGCGACGAGGTCACCGAGCTCGCCGA
CGAGGCATACGCGATCCGCGTCCTGGACGCACTCGACAACACATCCCCGCCGGCCGTCCGCGCCCACGACGGCGTACGAC
TCATCTAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-108)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

32.886

100

0.363

Multiple sequence alignment