Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | PspS35_RS27995 | Genome accession | NZ_CP019431 |
| Coordinates | 6181535..6182569 (-) | Length | 344 a.a. |
| NCBI ID | WP_159937645.1 | Uniprot ID | A0A6I6W1T8 |
| Organism | Pseudomonas sp. S35 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 6176535..6187569
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PspS35_RS27965 (PspS35_28125) | ruvX | 6176600..6177037 (+) | 438 | WP_003176676.1 | Holliday junction resolvase RuvX | - |
| PspS35_RS27970 (PspS35_28130) | pyrR | 6177205..6177711 (+) | 507 | WP_159937640.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| PspS35_RS27975 (PspS35_28135) | - | 6177736..6178740 (+) | 1005 | WP_159937641.1 | aspartate carbamoyltransferase catalytic subunit | - |
| PspS35_RS27980 (PspS35_28140) | - | 6178737..6180011 (+) | 1275 | WP_159937642.1 | dihydroorotase | - |
| PspS35_RS27985 (PspS35_28145) | - | 6180082..6180510 (-) | 429 | WP_159937643.1 | NINE protein | - |
| PspS35_RS27990 (PspS35_28150) | - | 6180761..6181396 (+) | 636 | WP_159937644.1 | C40 family peptidase | - |
| PspS35_RS27995 (PspS35_28155) | pilT | 6181535..6182569 (-) | 1035 | WP_159937645.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| PspS35_RS28000 (PspS35_28160) | - | 6182627..6183322 (+) | 696 | WP_159937646.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| PspS35_RS28005 (PspS35_28165) | proC | 6183347..6184165 (+) | 819 | WP_159937647.1 | pyrroline-5-carboxylate reductase | - |
| PspS35_RS28010 (PspS35_28170) | - | 6184191..6184778 (+) | 588 | WP_159937648.1 | YggT family protein | - |
| PspS35_RS28015 (PspS35_28175) | - | 6184884..6186023 (+) | 1140 | WP_159937649.1 | homoserine O-acetyltransferase | - |
| PspS35_RS28020 (PspS35_28180) | metW | 6186031..6186651 (+) | 621 | WP_017735309.1 | methionine biosynthesis protein MetW | - |
| PspS35_RS28025 (PspS35_28185) | - | 6186673..6187107 (+) | 435 | WP_159937650.1 | DUF4426 domain-containing protein | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 37428.20 Da Isoelectric Point: 7.6872
>NTDB_id=215739 PspS35_RS27995 WP_159937645.1 6181535..6182569(-) (pilT) [Pseudomonas sp. S35]
MDITELLVAGVRRGASDLHLSAGLAPMLRVDGEVWPLDWPPLSAAQVADLLSPLLSQYQRKDFETSLETDFAFELPGVAR
FRANVFQQARGMGAVFRTIAAEVKSLESLGLGEVFQRIAQLPRGLVLVTGPTGSGKSTTLAAMIDHLNQHRRQHILTLED
PIEFIHRPKSSLINQRQVHRDTHSFSAALRSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTGSAAKTVDRL
VDVFPVGEKARVRSMLSESLQAVVSQVLVKRLGGGRVAAHEIMLGTPAIRNLIREDKVAQMVSAIQTGGALGMKTLDMSL
KALVTEGVISREEAREKARVPADI
MDITELLVAGVRRGASDLHLSAGLAPMLRVDGEVWPLDWPPLSAAQVADLLSPLLSQYQRKDFETSLETDFAFELPGVAR
FRANVFQQARGMGAVFRTIAAEVKSLESLGLGEVFQRIAQLPRGLVLVTGPTGSGKSTTLAAMIDHLNQHRRQHILTLED
PIEFIHRPKSSLINQRQVHRDTHSFSAALRSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTGSAAKTVDRL
VDVFPVGEKARVRSMLSESLQAVVSQVLVKRLGGGRVAAHEIMLGTPAIRNLIREDKVAQMVSAIQTGGALGMKTLDMSL
KALVTEGVISREEAREKARVPADI
Nucleotide
Download Length: 1035 bp
>NTDB_id=215739 PspS35_RS27995 WP_159937645.1 6181535..6182569(-) (pilT) [Pseudomonas sp. S35]
ATGGATATCACTGAATTGCTGGTGGCCGGCGTGCGCCGAGGCGCCTCCGACCTGCATTTGTCGGCCGGCCTGGCGCCGAT
GCTGCGGGTGGATGGCGAAGTGTGGCCGCTGGATTGGCCGCCACTGTCAGCTGCGCAAGTGGCGGATTTGCTCAGCCCAC
TGCTCAGCCAATACCAACGAAAGGATTTCGAAACCTCTCTTGAAACCGATTTTGCCTTCGAGCTGCCCGGTGTGGCGCGG
TTCCGGGCGAATGTGTTCCAGCAGGCTCGTGGCATGGGCGCGGTGTTCCGCACCATTGCAGCCGAGGTCAAAAGCCTGGA
AAGCCTGGGCCTGGGAGAGGTGTTCCAGCGTATTGCGCAGTTGCCGCGCGGCCTGGTGCTGGTGACCGGGCCCACTGGCT
CAGGCAAGTCCACCACCCTGGCGGCGATGATCGATCACCTCAACCAGCATCGGCGTCAGCACATCCTCACGCTGGAAGAC
CCCATCGAATTTATCCACAGGCCGAAAAGCTCGCTGATCAACCAACGGCAGGTGCACCGCGACACTCACAGTTTTTCGGC
GGCCTTGCGCTCGGCGCTGCGTGAAGACCCCGACGTGATCTTGGTGGGCGAACTGCGTGACCTGGAAACCATCCGCCTGG
CGCTGACGGCGGCTGAAACCGGGCATTTGGTATTTGGCACCCTGCACACCGGCTCGGCGGCAAAGACCGTGGACAGGCTG
GTGGACGTGTTCCCGGTCGGTGAAAAAGCCAGGGTGCGCTCGATGCTGTCGGAGTCGTTGCAGGCGGTGGTGTCACAGGT
GCTGGTGAAGCGACTCGGCGGCGGGCGCGTGGCGGCCCATGAAATCATGTTGGGCACGCCGGCCATTCGTAATTTGATTC
GTGAGGACAAGGTGGCGCAGATGGTCTCGGCGATCCAGACCGGCGGGGCGTTGGGGATGAAGACGTTGGATATGAGTTTG
AAGGCGTTGGTCACGGAGGGCGTGATCAGCCGGGAAGAGGCAAGGGAGAAGGCGAGGGTGCCGGCAGACATATGA
ATGGATATCACTGAATTGCTGGTGGCCGGCGTGCGCCGAGGCGCCTCCGACCTGCATTTGTCGGCCGGCCTGGCGCCGAT
GCTGCGGGTGGATGGCGAAGTGTGGCCGCTGGATTGGCCGCCACTGTCAGCTGCGCAAGTGGCGGATTTGCTCAGCCCAC
TGCTCAGCCAATACCAACGAAAGGATTTCGAAACCTCTCTTGAAACCGATTTTGCCTTCGAGCTGCCCGGTGTGGCGCGG
TTCCGGGCGAATGTGTTCCAGCAGGCTCGTGGCATGGGCGCGGTGTTCCGCACCATTGCAGCCGAGGTCAAAAGCCTGGA
AAGCCTGGGCCTGGGAGAGGTGTTCCAGCGTATTGCGCAGTTGCCGCGCGGCCTGGTGCTGGTGACCGGGCCCACTGGCT
CAGGCAAGTCCACCACCCTGGCGGCGATGATCGATCACCTCAACCAGCATCGGCGTCAGCACATCCTCACGCTGGAAGAC
CCCATCGAATTTATCCACAGGCCGAAAAGCTCGCTGATCAACCAACGGCAGGTGCACCGCGACACTCACAGTTTTTCGGC
GGCCTTGCGCTCGGCGCTGCGTGAAGACCCCGACGTGATCTTGGTGGGCGAACTGCGTGACCTGGAAACCATCCGCCTGG
CGCTGACGGCGGCTGAAACCGGGCATTTGGTATTTGGCACCCTGCACACCGGCTCGGCGGCAAAGACCGTGGACAGGCTG
GTGGACGTGTTCCCGGTCGGTGAAAAAGCCAGGGTGCGCTCGATGCTGTCGGAGTCGTTGCAGGCGGTGGTGTCACAGGT
GCTGGTGAAGCGACTCGGCGGCGGGCGCGTGGCGGCCCATGAAATCATGTTGGGCACGCCGGCCATTCGTAATTTGATTC
GTGAGGACAAGGTGGCGCAGATGGTCTCGGCGATCCAGACCGGCGGGGCGTTGGGGATGAAGACGTTGGATATGAGTTTG
AAGGCGTTGGTCACGGAGGGCGTGATCAGCCGGGAAGAGGCAAGGGAGAAGGCGAGGGTGCCGGCAGACATATGA
Similar proteins
Only experimentally validated proteins are listed.