Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | BKP64_RS12920 | Genome accession | NZ_CP017715 |
| Coordinates | 2774557..2775591 (-) | Length | 344 a.a. |
| NCBI ID | WP_070970739.1 | Uniprot ID | A0A1D9GMY1 |
| Organism | Marinobacter salinus strain Hb8 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2769557..2780591
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BKP64_RS12900 (BKP64_12900) | polA | 2769756..2772482 (+) | 2727 | WP_070970727.1 | DNA polymerase I | - |
| BKP64_RS12905 (BKP64_12905) | - | 2772721..2773095 (+) | 375 | WP_070970730.1 | hypothetical protein | - |
| BKP64_RS12910 (BKP64_12910) | - | 2773115..2773297 (-) | 183 | WP_070970733.1 | hypothetical protein | - |
| BKP64_RS12915 (BKP64_12915) | pilU | 2773398..2774519 (-) | 1122 | WP_070970735.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| BKP64_RS12920 (BKP64_12920) | pilT | 2774557..2775591 (-) | 1035 | WP_070970739.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| BKP64_RS12925 (BKP64_12925) | - | 2775733..2776437 (+) | 705 | WP_070970742.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| BKP64_RS12930 (BKP64_12930) | proC | 2776500..2777333 (+) | 834 | WP_070973679.1 | pyrroline-5-carboxylate reductase | - |
| BKP64_RS12935 (BKP64_12935) | - | 2777356..2777940 (+) | 585 | WP_070970745.1 | YggT family protein | - |
| BKP64_RS12940 (BKP64_12940) | - | 2778194..2780158 (+) | 1965 | WP_070970748.1 | dynamin family protein | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 38134.82 Da Isoelectric Point: 6.2447
>NTDB_id=202209 BKP64_RS12920 WP_070970739.1 2774557..2775591(-) (pilT) [Marinobacter salinus strain Hb8]
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPMEHKEVHGLIYDIMNDKQRKDYEEFLETDFSFEVPGVAR
FRVNAFNQNRGAGAVFRTIPSKVLTMEDLGMGQTFKDISSVPRGLVLVTGPTGSGKSTTLAAMMDYINDTRYEHVLTIED
PIEFVHESKKCLVNQREVHRDTLGFNEALRSALREDPDIILVGELRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
VDVFPAEEKSMVRSMLSESLQAVVSQTLMKKMGGGRIAAHEIMIGTSAIRNLIREDKIAQMYSSIQTGGSLGMQTLDQCL
ERLLQKGLISREAARAKAKMPDNF
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPMEHKEVHGLIYDIMNDKQRKDYEEFLETDFSFEVPGVAR
FRVNAFNQNRGAGAVFRTIPSKVLTMEDLGMGQTFKDISSVPRGLVLVTGPTGSGKSTTLAAMMDYINDTRYEHVLTIED
PIEFVHESKKCLVNQREVHRDTLGFNEALRSALREDPDIILVGELRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
VDVFPAEEKSMVRSMLSESLQAVVSQTLMKKMGGGRIAAHEIMIGTSAIRNLIREDKIAQMYSSIQTGGSLGMQTLDQCL
ERLLQKGLISREAARAKAKMPDNF
Nucleotide
Download Length: 1035 bp
>NTDB_id=202209 BKP64_RS12920 WP_070970739.1 2774557..2775591(-) (pilT) [Marinobacter salinus strain Hb8]
ATGGATATTACTGAACTGCTTGCCTTCTCGGCCAAACAGGGTGCGTCCGACTTGCACCTGTCCGCTGGCCTGCCCCCGAT
GATTCGTGTTGACGGCGATGTGCGCCGGATCAATCTGCCGCCGATGGAGCATAAAGAAGTCCACGGGCTGATTTACGACA
TCATGAACGACAAGCAGAGAAAGGACTACGAGGAATTCCTGGAAACCGACTTCTCCTTTGAAGTTCCGGGTGTGGCCCGT
TTCCGTGTTAACGCCTTTAACCAGAACCGGGGCGCCGGTGCGGTGTTCCGGACCATCCCGTCGAAGGTCCTGACCATGGA
AGACCTGGGCATGGGTCAGACGTTCAAGGATATTTCCTCGGTACCCCGTGGCCTGGTGCTTGTTACAGGGCCTACCGGTT
CAGGTAAGTCCACCACGCTGGCGGCGATGATGGACTACATCAACGACACCCGTTACGAGCATGTCCTCACCATTGAGGAC
CCGATCGAATTCGTGCATGAGTCCAAGAAGTGTCTGGTGAACCAGCGGGAAGTACACCGGGACACTCTTGGCTTTAACGA
AGCATTGCGCTCCGCTTTGCGGGAAGACCCGGACATTATCCTGGTGGGTGAGCTTCGTGACCTTGAAACCATTCGCCTGG
CGCTGACGGCGGCTGAAACCGGCCACCTGGTGTTCGGTACCCTGCACACCACCTCTGCCGCCAAGACCATTGACCGGGTT
GTCGATGTTTTCCCGGCGGAAGAGAAATCCATGGTGCGATCGATGCTGTCCGAGTCCCTGCAGGCGGTTGTCTCGCAGAC
CCTGATGAAGAAGATGGGCGGTGGCCGGATTGCCGCCCACGAAATCATGATCGGTACCTCAGCGATCCGCAACCTGATTC
GCGAAGACAAGATTGCCCAGATGTATTCCTCGATCCAGACCGGCGGGTCCCTTGGAATGCAGACGCTGGACCAATGTCTG
GAGCGCCTGTTGCAGAAGGGGCTTATCTCCCGCGAGGCAGCTCGGGCCAAAGCGAAGATGCCGGACAACTTCTGA
ATGGATATTACTGAACTGCTTGCCTTCTCGGCCAAACAGGGTGCGTCCGACTTGCACCTGTCCGCTGGCCTGCCCCCGAT
GATTCGTGTTGACGGCGATGTGCGCCGGATCAATCTGCCGCCGATGGAGCATAAAGAAGTCCACGGGCTGATTTACGACA
TCATGAACGACAAGCAGAGAAAGGACTACGAGGAATTCCTGGAAACCGACTTCTCCTTTGAAGTTCCGGGTGTGGCCCGT
TTCCGTGTTAACGCCTTTAACCAGAACCGGGGCGCCGGTGCGGTGTTCCGGACCATCCCGTCGAAGGTCCTGACCATGGA
AGACCTGGGCATGGGTCAGACGTTCAAGGATATTTCCTCGGTACCCCGTGGCCTGGTGCTTGTTACAGGGCCTACCGGTT
CAGGTAAGTCCACCACGCTGGCGGCGATGATGGACTACATCAACGACACCCGTTACGAGCATGTCCTCACCATTGAGGAC
CCGATCGAATTCGTGCATGAGTCCAAGAAGTGTCTGGTGAACCAGCGGGAAGTACACCGGGACACTCTTGGCTTTAACGA
AGCATTGCGCTCCGCTTTGCGGGAAGACCCGGACATTATCCTGGTGGGTGAGCTTCGTGACCTTGAAACCATTCGCCTGG
CGCTGACGGCGGCTGAAACCGGCCACCTGGTGTTCGGTACCCTGCACACCACCTCTGCCGCCAAGACCATTGACCGGGTT
GTCGATGTTTTCCCGGCGGAAGAGAAATCCATGGTGCGATCGATGCTGTCCGAGTCCCTGCAGGCGGTTGTCTCGCAGAC
CCTGATGAAGAAGATGGGCGGTGGCCGGATTGCCGCCCACGAAATCATGATCGGTACCTCAGCGATCCGCAACCTGATTC
GCGAAGACAAGATTGCCCAGATGTATTCCTCGATCCAGACCGGCGGGTCCCTTGGAATGCAGACGCTGGACCAATGTCTG
GAGCGCCTGTTGCAGAAGGGGCTTATCTCCCGCGAGGCAGCTCGGGCCAAAGCGAAGATGCCGGACAACTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
89.535 |
100 |
0.895 |
| pilT | Pseudomonas stutzeri DSM 10701 |
89.535 |
100 |
0.895 |
| pilT | Acinetobacter nosocomialis M2 |
82.849 |
100 |
0.828 |
| pilT | Acinetobacter baumannii D1279779 |
82.849 |
100 |
0.828 |
| pilT | Acinetobacter baumannii strain A118 |
82.849 |
100 |
0.828 |
| pilT | Acinetobacter baylyi ADP1 |
81.686 |
100 |
0.817 |
| pilT | Legionella pneumophila strain Lp02 |
77.219 |
98.256 |
0.759 |
| pilT | Legionella pneumophila strain ERS1305867 |
77.219 |
98.256 |
0.759 |
| pilT | Neisseria gonorrhoeae MS11 |
67.647 |
98.837 |
0.669 |
| pilT | Neisseria meningitidis 8013 |
67.647 |
98.837 |
0.669 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
65.882 |
98.837 |
0.651 |
| pilT | Vibrio cholerae strain A1552 |
65.882 |
98.837 |
0.651 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.304 |
100 |
0.515 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.896 |
97.384 |
0.398 |
| pilU | Acinetobacter baylyi ADP1 |
38.728 |
100 |
0.39 |
| pilU | Vibrio cholerae strain A1552 |
39.104 |
97.384 |
0.381 |