Detailed information
Bioinformatically predicted
Overview
| Name | pilX | Type | Machinery gene |
| Locus tag | QP84_RS08580 | Genome accession | NZ_CP016684 |
| Coordinates | 1665750..1666223 (+) | Length | 157 a.a. |
| NCBI ID | WP_180302171.1 | Uniprot ID | - |
| Organism | Neisseria meningitidis strain L91543 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1660750..1671223
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QP84_RS08555 (QP84_008555) | dnaB | 1661157..1662563 (+) | 1407 | WP_002220671.1 | replicative DNA helicase | - |
| QP84_RS08560 (QP84_008560) | pilH | 1662872..1663540 (+) | 669 | WP_065818665.1 | GspH/FimT family pseudopilin | Machinery gene |
| QP84_RS08565 (QP84_008565) | pilV | 1663570..1664190 (+) | 621 | WP_042745216.1 | type IV pilus modification protein PilV | Machinery gene |
| QP84_RS08570 (QP84_008570) | pilJ | 1664187..1665173 (+) | 987 | WP_025458522.1 | PilW family protein | Machinery gene |
| QP84_RS08575 (QP84_008575) | pilK | 1665152..1665745 (+) | 594 | WP_002219444.1 | pilus assembly PilX family protein | Machinery gene |
| QP84_RS08580 (QP84_008580) | pilX | 1665750..1666223 (+) | 474 | WP_180302171.1 | PilX family type IV pilin | Machinery gene |
| QP84_RS08585 (QP84_008585) | - | 1668310..1668738 (-) | 429 | Protein_1590 | AzlC family ABC transporter permease | - |
| QP84_RS08590 (QP84_008590) | dut | 1668881..1669333 (+) | 453 | WP_002226436.1 | dUTP diphosphatase | - |
| QP84_RS08595 (QP84_008595) | dapC | 1669409..1670596 (+) | 1188 | WP_042745180.1 | succinyldiaminopimelate transaminase | - |
| QP84_RS14810 | - | 1670684..1670809 (+) | 126 | Protein_1593 | IS5/IS1182 family transposase | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 17463.18 Da Isoelectric Point: 9.5866
>NTDB_id=191832 QP84_RS08580 WP_180302171.1 1665750..1666223(+) (pilX) [Neisseria meningitidis strain L91543]
MEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIEKGYQSQLYTEMVGINNISKQIILKNPQDSNDILNIKLTRFVSGYKM
NPKIAEKYNVSVHFVNKEKPRAYSLVGVPKTGTGYTLSVWMNSVGDGYKCRDAASARAYSETLSADAGCEAFSNRKK
MEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIEKGYQSQLYTEMVGINNISKQIILKNPQDSNDILNIKLTRFVSGYKM
NPKIAEKYNVSVHFVNKEKPRAYSLVGVPKTGTGYTLSVWMNSVGDGYKCRDAASARAYSETLSADAGCEAFSNRKK
Nucleotide
Download Length: 474 bp
>NTDB_id=191832 QP84_RS08580 WP_180302171.1 1665750..1666223(+) (pilX) [Neisseria meningitidis strain L91543]
ATGGAACAAAAAGGGTTTACATTGATTGAGATGATGATAGTCGTCGCGATACTCGGCATCATCAGCGTCATTGCCATACC
TTCTTATCAAAGTTATATTGAAAAAGGCTATCAGTCCCAGCTTTATACGGAGATGGTCGGTATCAACAATATTTCCAAAC
AGATTATTTTGAAAAATCCACAGGATAGTAATGATATCCTCAATATAAAACTGACAAGGTTTGTCTCAGGCTATAAGATG
AATCCGAAAATTGCCGAAAAATATAATGTTTCGGTGCATTTTGTCAATAAGGAAAAACCAAGGGCATACAGCTTGGTCGG
CGTTCCAAAGACGGGGACGGGTTATACTTTGTCGGTATGGATGAACAGCGTGGGCGACGGATACAAATGCCGTGATGCCG
CTTCTGCCCGAGCCTATTCGGAGACTTTGTCCGCGGATGCCGGCTGTGAAGCCTTCTCTAATCGTAAAAAATAG
ATGGAACAAAAAGGGTTTACATTGATTGAGATGATGATAGTCGTCGCGATACTCGGCATCATCAGCGTCATTGCCATACC
TTCTTATCAAAGTTATATTGAAAAAGGCTATCAGTCCCAGCTTTATACGGAGATGGTCGGTATCAACAATATTTCCAAAC
AGATTATTTTGAAAAATCCACAGGATAGTAATGATATCCTCAATATAAAACTGACAAGGTTTGTCTCAGGCTATAAGATG
AATCCGAAAATTGCCGAAAAATATAATGTTTCGGTGCATTTTGTCAATAAGGAAAAACCAAGGGCATACAGCTTGGTCGG
CGTTCCAAAGACGGGGACGGGTTATACTTTGTCGGTATGGATGAACAGCGTGGGCGACGGATACAAATGCCGTGATGCCG
CTTCTGCCCGAGCCTATTCGGAGACTTTGTCCGCGGATGCCGGCTGTGAAGCCTTCTCTAATCGTAAAAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilX | Neisseria meningitidis 8013 |
91.72 |
100 |
0.917 |
| pilL | Neisseria gonorrhoeae MS11 |
85.987 |
100 |
0.86 |