Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | A3K93_RS02735 | Genome accession | NZ_CP015594 |
| Coordinates | 587209..588246 (-) | Length | 345 a.a. |
| NCBI ID | WP_067728712.1 | Uniprot ID | - |
| Organism | Acinetobacter sp. NCu2D-2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 582209..593246
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A3K93_RS02705 (A3K93_02705) | - | 582936..583391 (+) | 456 | WP_067728699.1 | bacteriohemerythrin | - |
| A3K93_RS02710 (A3K93_02710) | - | 583534..584613 (+) | 1080 | WP_067728701.1 | hypothetical protein | - |
| A3K93_RS02715 (A3K93_02715) | - | 584613..584957 (+) | 345 | WP_067728703.1 | RnfH family protein | - |
| A3K93_RS02720 (A3K93_02720) | bamE | 585046..585444 (-) | 399 | WP_067728705.1 | outer membrane protein assembly factor BamE | - |
| A3K93_RS02725 (A3K93_02725) | fur | 585557..585994 (+) | 438 | WP_067728707.1 | ferric iron uptake transcriptional regulator | - |
| A3K93_RS02730 (A3K93_02730) | pilU | 586061..587182 (-) | 1122 | WP_067728710.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| A3K93_RS02735 (A3K93_02735) | pilT | 587209..588246 (-) | 1038 | WP_067728712.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| A3K93_RS02740 (A3K93_02740) | - | 588369..589061 (+) | 693 | WP_067728714.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| A3K93_RS02745 (A3K93_02745) | - | 589110..592709 (-) | 3600 | WP_067728716.1 | AAA family ATPase | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 38309.99 Da Isoelectric Point: 6.5061
>NTDB_id=181236 A3K93_RS02735 WP_067728712.1 587209..588246(-) (pilT) [Acinetobacter sp. NCu2D-2]
MDITELLAFSAKNGASDLHLSAGMPPLIRVDGEVRRINLPVLEHKEVHKLVYDIMNDKQRRDFEENLETDFSFEVPGVAR
FRVNAFNQNRGAGAVFRTIPSKVLTMEELGMGQIFKEICEYPRGIVLVTGPTGSGKSTTLAAMLDYINDNRYDHILTVED
PIEFVHQSKKCLINQREVHRDTHGFNEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
IDVFPAEEKDMVRAMLSESLQAVISQTLLKKNGGGRVAAHEIMIGIPAIRNLIRENKVAQMYSAIQTGANYGMTTLDQSL
KTLVSKGIISPQVARTAAKQPESFL
MDITELLAFSAKNGASDLHLSAGMPPLIRVDGEVRRINLPVLEHKEVHKLVYDIMNDKQRRDFEENLETDFSFEVPGVAR
FRVNAFNQNRGAGAVFRTIPSKVLTMEELGMGQIFKEICEYPRGIVLVTGPTGSGKSTTLAAMLDYINDNRYDHILTVED
PIEFVHQSKKCLINQREVHRDTHGFNEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
IDVFPAEEKDMVRAMLSESLQAVISQTLLKKNGGGRVAAHEIMIGIPAIRNLIRENKVAQMYSAIQTGANYGMTTLDQSL
KTLVSKGIISPQVARTAAKQPESFL
Nucleotide
Download Length: 1038 bp
>NTDB_id=181236 A3K93_RS02735 WP_067728712.1 587209..588246(-) (pilT) [Acinetobacter sp. NCu2D-2]
ATGGACATTACAGAATTATTGGCATTTTCTGCTAAAAATGGTGCGTCGGATTTACACTTATCTGCGGGTATGCCGCCACT
GATTCGTGTCGATGGGGAAGTTCGTCGTATTAATTTGCCAGTTTTAGAGCATAAAGAAGTCCATAAACTTGTTTACGACA
TCATGAATGATAAACAGCGTCGTGACTTTGAAGAAAATTTAGAAACCGACTTCTCTTTTGAAGTACCGGGTGTGGCGCGT
TTCCGTGTGAACGCATTTAACCAAAACCGTGGTGCTGGTGCTGTATTCCGTACCATTCCATCGAAAGTATTGACGATGGA
AGAATTGGGGATGGGGCAAATTTTTAAAGAAATTTGTGAATATCCACGTGGTATTGTCTTGGTGACAGGTCCTACAGGTT
CAGGTAAATCAACCACCCTAGCAGCCATGCTCGACTACATTAATGACAACCGCTATGACCATATTCTAACGGTTGAAGAT
CCAATCGAATTTGTACACCAATCGAAAAAATGCTTGATTAACCAGCGTGAAGTACACCGTGATACCCACGGTTTTAATGA
AGCACTTCGCTCTGCACTTCGTGAAGACCCTGACATTATCTTGGTCGGTGAGATGCGTGACCTTGAAACTATCCGTTTGG
CATTAACAGCGGCTGAAACAGGTCACTTAGTCTTCGGTACCCTACATACCACCTCTGCAGCTAAAACCATTGACCGTGTG
ATCGACGTATTCCCTGCTGAAGAAAAAGACATGGTTCGTGCCATGCTGTCAGAATCACTTCAAGCTGTAATCTCACAAAC
ACTCCTCAAGAAAAATGGCGGTGGCCGTGTTGCAGCACATGAAATCATGATTGGTATTCCTGCGATTCGTAACCTCATTC
GTGAAAACAAAGTCGCACAAATGTACTCAGCGATCCAAACCGGTGCCAACTACGGTATGACCACACTGGATCAAAGCTTA
AAAACATTGGTATCAAAAGGCATTATTAGCCCACAAGTTGCACGTACTGCTGCGAAGCAACCTGAGTCATTCTTATAA
ATGGACATTACAGAATTATTGGCATTTTCTGCTAAAAATGGTGCGTCGGATTTACACTTATCTGCGGGTATGCCGCCACT
GATTCGTGTCGATGGGGAAGTTCGTCGTATTAATTTGCCAGTTTTAGAGCATAAAGAAGTCCATAAACTTGTTTACGACA
TCATGAATGATAAACAGCGTCGTGACTTTGAAGAAAATTTAGAAACCGACTTCTCTTTTGAAGTACCGGGTGTGGCGCGT
TTCCGTGTGAACGCATTTAACCAAAACCGTGGTGCTGGTGCTGTATTCCGTACCATTCCATCGAAAGTATTGACGATGGA
AGAATTGGGGATGGGGCAAATTTTTAAAGAAATTTGTGAATATCCACGTGGTATTGTCTTGGTGACAGGTCCTACAGGTT
CAGGTAAATCAACCACCCTAGCAGCCATGCTCGACTACATTAATGACAACCGCTATGACCATATTCTAACGGTTGAAGAT
CCAATCGAATTTGTACACCAATCGAAAAAATGCTTGATTAACCAGCGTGAAGTACACCGTGATACCCACGGTTTTAATGA
AGCACTTCGCTCTGCACTTCGTGAAGACCCTGACATTATCTTGGTCGGTGAGATGCGTGACCTTGAAACTATCCGTTTGG
CATTAACAGCGGCTGAAACAGGTCACTTAGTCTTCGGTACCCTACATACCACCTCTGCAGCTAAAACCATTGACCGTGTG
ATCGACGTATTCCCTGCTGAAGAAAAAGACATGGTTCGTGCCATGCTGTCAGAATCACTTCAAGCTGTAATCTCACAAAC
ACTCCTCAAGAAAAATGGCGGTGGCCGTGTTGCAGCACATGAAATCATGATTGGTATTCCTGCGATTCGTAACCTCATTC
GTGAAAACAAAGTCGCACAAATGTACTCAGCGATCCAAACCGGTGCCAACTACGGTATGACCACACTGGATCAAAGCTTA
AAAACATTGGTATCAAAAGGCATTATTAGCCCACAAGTTGCACGTACTGCTGCGAAGCAACCTGAGTCATTCTTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter nosocomialis M2 |
94.783 |
100 |
0.948 |
| pilT | Acinetobacter baumannii D1279779 |
94.493 |
100 |
0.945 |
| pilT | Acinetobacter baumannii strain A118 |
94.493 |
100 |
0.945 |
| pilT | Acinetobacter baylyi ADP1 |
86.628 |
99.71 |
0.864 |
| pilT | Pseudomonas aeruginosa PAK |
84.884 |
99.71 |
0.846 |
| pilT | Pseudomonas stutzeri DSM 10701 |
83.721 |
99.71 |
0.835 |
| pilT | Legionella pneumophila strain Lp02 |
74.419 |
99.71 |
0.742 |
| pilT | Legionella pneumophila strain ERS1305867 |
74.419 |
99.71 |
0.742 |
| pilT | Neisseria meningitidis 8013 |
68.696 |
100 |
0.687 |
| pilT | Neisseria gonorrhoeae MS11 |
68.116 |
100 |
0.681 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
68.976 |
96.232 |
0.664 |
| pilT | Vibrio cholerae strain A1552 |
68.976 |
96.232 |
0.664 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.594 |
100 |
0.516 |
| pilU | Vibrio cholerae strain A1552 |
41.593 |
98.261 |
0.409 |
| pilU | Acinetobacter baylyi ADP1 |
39.017 |
100 |
0.391 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.785 |
95.942 |
0.391 |