Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | ACP86_RS12575 | Genome accession | NZ_CP011929 |
| Coordinates | 2728368..2729402 (+) | Length | 344 a.a. |
| NCBI ID | WP_008174189.1 | Uniprot ID | A0A352INV9 |
| Organism | Marinobacter sp. CP1 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2723368..2734402
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACP86_RS12555 (ACP86_12550) | - | 2723813..2725777 (-) | 1965 | WP_008174181.1 | dynamin family protein | - |
| ACP86_RS12560 (ACP86_12555) | - | 2726021..2726605 (-) | 585 | WP_008174183.1 | YggT family protein | - |
| ACP86_RS12565 (ACP86_12560) | proC | 2726628..2727461 (-) | 834 | WP_014575886.1 | pyrroline-5-carboxylate reductase | - |
| ACP86_RS12570 (ACP86_12565) | - | 2727523..2728227 (-) | 705 | WP_039882033.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| ACP86_RS12575 (ACP86_12570) | pilT | 2728368..2729402 (+) | 1035 | WP_008174189.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| ACP86_RS12580 (ACP86_12575) | pilU | 2729461..2730582 (+) | 1122 | WP_008174191.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| ACP86_RS12585 (ACP86_12580) | - | 2730822..2732105 (+) | 1284 | WP_008174193.1 | OmpP1/FadL family transporter | - |
| ACP86_RS12590 (ACP86_12585) | - | 2732137..2732511 (-) | 375 | WP_053114212.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 38100.79 Da Isoelectric Point: 6.2443
>NTDB_id=149351 ACP86_RS12575 WP_008174189.1 2728368..2729402(+) (pilT) [Marinobacter sp. CP1]
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPMEHKEVHGLIYDIMNDKQRKDYEEFLETDFSFEVPGVAR
FRVNAFNQNRGAGAVFRTIPSKVLTMEDLGMGQVFKDVSSVPRGLVLVTGPTGSGKSTTLAAMIDYINDTRYEHVLTIED
PIEFVHDSKKCLVNQREVHRDTLGFNEALRSALREDPDIILVGELRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
VDVFPAEEKSMVRSMLSESLQAVISQTLMKKMGGGRIAAHEIMIGTSAIRNLIREDKIAQMYSSIQTGGSLGMQTLDQCL
ERLLQKGLISREAARAKAKMPDNF
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPMEHKEVHGLIYDIMNDKQRKDYEEFLETDFSFEVPGVAR
FRVNAFNQNRGAGAVFRTIPSKVLTMEDLGMGQVFKDVSSVPRGLVLVTGPTGSGKSTTLAAMIDYINDTRYEHVLTIED
PIEFVHDSKKCLVNQREVHRDTLGFNEALRSALREDPDIILVGELRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
VDVFPAEEKSMVRSMLSESLQAVISQTLMKKMGGGRIAAHEIMIGTSAIRNLIREDKIAQMYSSIQTGGSLGMQTLDQCL
ERLLQKGLISREAARAKAKMPDNF
Nucleotide
Download Length: 1035 bp
>NTDB_id=149351 ACP86_RS12575 WP_008174189.1 2728368..2729402(+) (pilT) [Marinobacter sp. CP1]
ATGGATATTACTGAACTGCTTGCCTTTTCGGCGAAACAGGGTGCGTCTGACTTGCACCTCTCTGCCGGTTTGCCCCCGAT
GATTCGTGTTGATGGTGATGTACGCCGCATCAACCTGCCGCCCATGGAGCACAAAGAAGTCCACGGGCTCATCTACGACA
TCATGAATGACAAGCAGCGTAAGGACTACGAGGAATTCCTGGAAACCGACTTCTCCTTCGAAGTTCCGGGCGTCGCCCGT
TTCCGTGTTAACGCTTTTAACCAGAACCGTGGCGCAGGCGCCGTGTTCCGGACCATCCCTTCCAAAGTACTGACCATGGA
AGATCTGGGTATGGGGCAGGTGTTCAAGGACGTGTCTTCAGTGCCCCGGGGGCTGGTTCTGGTGACCGGCCCGACCGGCT
CGGGTAAGTCCACCACGCTGGCGGCGATGATCGATTACATCAACGACACCCGCTACGAACACGTTCTTACCATTGAAGAC
CCCATTGAATTTGTACACGACTCCAAGAAATGTCTGGTCAACCAGCGTGAAGTTCACCGCGATACCCTGGGCTTCAACGA
AGCACTGCGTTCAGCACTGCGGGAAGACCCCGACATCATTCTGGTGGGTGAGCTTCGGGATCTGGAAACCATCCGCCTCG
CGCTGACGGCGGCCGAAACGGGCCACCTTGTGTTCGGCACACTTCACACCACCTCTGCCGCCAAGACCATTGACCGTGTG
GTCGACGTGTTCCCGGCGGAGGAAAAGTCCATGGTGCGGTCGATGCTGTCAGAATCCCTGCAGGCAGTTATATCCCAGAC
CCTGATGAAGAAAATGGGCGGCGGCCGGATTGCGGCGCACGAGATCATGATCGGTACGTCTGCGATCCGGAACCTGATCC
GGGAAGACAAGATCGCGCAGATGTATTCGTCGATCCAGACCGGCGGTTCACTGGGCATGCAGACGTTGGACCAGTGCCTG
GAGCGGCTGCTGCAGAAAGGGCTTATTTCCCGTGAAGCGGCGCGGGCCAAGGCCAAGATGCCCGATAATTTTTAA
ATGGATATTACTGAACTGCTTGCCTTTTCGGCGAAACAGGGTGCGTCTGACTTGCACCTCTCTGCCGGTTTGCCCCCGAT
GATTCGTGTTGATGGTGATGTACGCCGCATCAACCTGCCGCCCATGGAGCACAAAGAAGTCCACGGGCTCATCTACGACA
TCATGAATGACAAGCAGCGTAAGGACTACGAGGAATTCCTGGAAACCGACTTCTCCTTCGAAGTTCCGGGCGTCGCCCGT
TTCCGTGTTAACGCTTTTAACCAGAACCGTGGCGCAGGCGCCGTGTTCCGGACCATCCCTTCCAAAGTACTGACCATGGA
AGATCTGGGTATGGGGCAGGTGTTCAAGGACGTGTCTTCAGTGCCCCGGGGGCTGGTTCTGGTGACCGGCCCGACCGGCT
CGGGTAAGTCCACCACGCTGGCGGCGATGATCGATTACATCAACGACACCCGCTACGAACACGTTCTTACCATTGAAGAC
CCCATTGAATTTGTACACGACTCCAAGAAATGTCTGGTCAACCAGCGTGAAGTTCACCGCGATACCCTGGGCTTCAACGA
AGCACTGCGTTCAGCACTGCGGGAAGACCCCGACATCATTCTGGTGGGTGAGCTTCGGGATCTGGAAACCATCCGCCTCG
CGCTGACGGCGGCCGAAACGGGCCACCTTGTGTTCGGCACACTTCACACCACCTCTGCCGCCAAGACCATTGACCGTGTG
GTCGACGTGTTCCCGGCGGAGGAAAAGTCCATGGTGCGGTCGATGCTGTCAGAATCCCTGCAGGCAGTTATATCCCAGAC
CCTGATGAAGAAAATGGGCGGCGGCCGGATTGCGGCGCACGAGATCATGATCGGTACGTCTGCGATCCGGAACCTGATCC
GGGAAGACAAGATCGCGCAGATGTATTCGTCGATCCAGACCGGCGGTTCACTGGGCATGCAGACGTTGGACCAGTGCCTG
GAGCGGCTGCTGCAGAAAGGGCTTATTTCCCGTGAAGCGGCGCGGGCCAAGGCCAAGATGCCCGATAATTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
90.116 |
100 |
0.901 |
| pilT | Pseudomonas stutzeri DSM 10701 |
89.535 |
100 |
0.895 |
| pilT | Acinetobacter nosocomialis M2 |
82.849 |
100 |
0.828 |
| pilT | Acinetobacter baumannii D1279779 |
82.849 |
100 |
0.828 |
| pilT | Acinetobacter baumannii strain A118 |
82.849 |
100 |
0.828 |
| pilT | Acinetobacter baylyi ADP1 |
81.395 |
100 |
0.814 |
| pilT | Legionella pneumophila strain Lp02 |
77.219 |
98.256 |
0.759 |
| pilT | Legionella pneumophila strain ERS1305867 |
77.219 |
98.256 |
0.759 |
| pilT | Neisseria gonorrhoeae MS11 |
67.941 |
98.837 |
0.672 |
| pilT | Neisseria meningitidis 8013 |
67.941 |
98.837 |
0.672 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
65.882 |
98.837 |
0.651 |
| pilT | Vibrio cholerae strain A1552 |
65.882 |
98.837 |
0.651 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.014 |
100 |
0.512 |
| pilU | Pseudomonas stutzeri DSM 10701 |
41.194 |
97.384 |
0.401 |
| pilU | Acinetobacter baylyi ADP1 |
39.017 |
100 |
0.392 |
| pilU | Vibrio cholerae strain A1552 |
39.403 |
97.384 |
0.384 |