Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | ABA45_RS02785 | Genome accession | NZ_CP011494 |
| Coordinates | 632605..633639 (+) | Length | 344 a.a. |
| NCBI ID | WP_048384254.1 | Uniprot ID | A0A0H4HXP9 |
| Organism | Marinobacter psychrophilus strain 20041 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 627605..638639
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABA45_RS02765 (ABA45_02765) | - | 628031..629995 (-) | 1965 | WP_048384250.1 | dynamin family protein | - |
| ABA45_RS02770 (ABA45_02770) | - | 630251..630835 (-) | 585 | WP_048384251.1 | YggT family protein | - |
| ABA45_RS02775 (ABA45_02775) | proC | 630861..631691 (-) | 831 | WP_048384252.1 | pyrroline-5-carboxylate reductase | - |
| ABA45_RS02780 (ABA45_02780) | - | 631764..632468 (-) | 705 | WP_048384253.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| ABA45_RS02785 (ABA45_02785) | pilT | 632605..633639 (+) | 1035 | WP_048384254.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| ABA45_RS02790 (ABA45_02790) | pilU | 633713..634834 (+) | 1122 | WP_048384255.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| ABA45_RS02795 (ABA45_02795) | - | 634953..636383 (+) | 1431 | WP_084708264.1 | OmpP1/FadL family transporter | - |
| ABA45_RS02800 (ABA45_02800) | - | 636417..636782 (-) | 366 | WP_048384256.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 38151.99 Da Isoelectric Point: 6.7246
>NTDB_id=146328 ABA45_RS02785 WP_048384254.1 632605..633639(+) (pilT) [Marinobacter psychrophilus strain 20041]
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPLPHKEVHGLIYDIMNDKQRKDYEEFLETDFSFEVAGVAR
FRVNAFNQNRGSGAVFRTIPSKVLTMEDLGMGQVFKDICAVPRGLVLVTGPTGSGKSTTLAAMVDHINDHRYEHILTIED
PIEFVHESKKCLVNQREVHRDTLGFNEALRSALREDPDIILVGELRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
VDVFPAQEKSMVRSMLSESLQAVISQTLMKKMGGGRIAAHEIMIGTSAIRNLIREDKIAQMYSSIQTGGSLGMQTLDQCM
ERLLQKGLISREQARLKAKMPDAF
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPLPHKEVHGLIYDIMNDKQRKDYEEFLETDFSFEVAGVAR
FRVNAFNQNRGSGAVFRTIPSKVLTMEDLGMGQVFKDICAVPRGLVLVTGPTGSGKSTTLAAMVDHINDHRYEHILTIED
PIEFVHESKKCLVNQREVHRDTLGFNEALRSALREDPDIILVGELRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
VDVFPAQEKSMVRSMLSESLQAVISQTLMKKMGGGRIAAHEIMIGTSAIRNLIREDKIAQMYSSIQTGGSLGMQTLDQCM
ERLLQKGLISREQARLKAKMPDAF
Nucleotide
Download Length: 1035 bp
>NTDB_id=146328 ABA45_RS02785 WP_048384254.1 632605..633639(+) (pilT) [Marinobacter psychrophilus strain 20041]
ATGGATATTACTGAACTGCTTGCCTTCTCGGCGAAACAGGGTGCGTCGGACTTGCACCTTTCTGCTGGCTTGCCGCCGAT
GATTCGTGTGGACGGTGATGTACGCCGTATCAACCTGCCGCCTTTGCCTCATAAGGAAGTGCATGGCCTGATTTACGACA
TCATGAATGATAAGCAGCGTAAAGATTACGAAGAGTTCCTGGAAACCGACTTCTCGTTCGAAGTGGCGGGGGTTGCCCGC
TTCCGGGTCAACGCCTTTAACCAGAATCGCGGTTCCGGTGCGGTGTTCCGGACCATCCCGTCGAAGGTGCTGACCATGGA
AGACCTGGGCATGGGCCAGGTCTTCAAAGACATTTGCGCGGTGCCACGGGGCTTGGTTCTGGTAACTGGGCCCACCGGTT
CTGGCAAGTCGACCACGCTGGCGGCCATGGTAGACCACATCAACGACCACCGTTACGAACACATATTGACCATTGAAGAT
CCCATTGAGTTCGTGCACGAATCAAAAAAGTGTCTGGTTAACCAGCGCGAAGTGCACCGCGACACCCTAGGCTTTAATGA
AGCACTGCGCTCGGCGCTGCGGGAAGACCCGGACATTATTTTGGTGGGTGAACTGCGAGACCTTGAAACGATTCGTCTGG
CGCTGACGGCAGCTGAAACCGGCCACTTAGTATTTGGTACCCTGCACACCACCTCGGCGGCAAAAACCATTGACCGGGTG
GTTGACGTGTTTCCGGCCCAAGAAAAATCCATGGTGCGGTCGATGTTGTCTGAATCCTTACAGGCGGTTATCTCGCAAAC
CCTGATGAAGAAAATGGGCGGCGGGCGTATTGCTGCCCACGAAATCATGATTGGCACCTCGGCTATTCGCAACTTGATAC
GTGAAGACAAAATCGCGCAGATGTATTCGTCGATACAGACGGGCGGCTCGCTGGGCATGCAGACCCTGGACCAGTGTATG
GAACGCCTGTTGCAAAAGGGTCTTATCTCACGCGAACAAGCGCGTTTGAAAGCAAAAATGCCCGATGCCTTTTAA
ATGGATATTACTGAACTGCTTGCCTTCTCGGCGAAACAGGGTGCGTCGGACTTGCACCTTTCTGCTGGCTTGCCGCCGAT
GATTCGTGTGGACGGTGATGTACGCCGTATCAACCTGCCGCCTTTGCCTCATAAGGAAGTGCATGGCCTGATTTACGACA
TCATGAATGATAAGCAGCGTAAAGATTACGAAGAGTTCCTGGAAACCGACTTCTCGTTCGAAGTGGCGGGGGTTGCCCGC
TTCCGGGTCAACGCCTTTAACCAGAATCGCGGTTCCGGTGCGGTGTTCCGGACCATCCCGTCGAAGGTGCTGACCATGGA
AGACCTGGGCATGGGCCAGGTCTTCAAAGACATTTGCGCGGTGCCACGGGGCTTGGTTCTGGTAACTGGGCCCACCGGTT
CTGGCAAGTCGACCACGCTGGCGGCCATGGTAGACCACATCAACGACCACCGTTACGAACACATATTGACCATTGAAGAT
CCCATTGAGTTCGTGCACGAATCAAAAAAGTGTCTGGTTAACCAGCGCGAAGTGCACCGCGACACCCTAGGCTTTAATGA
AGCACTGCGCTCGGCGCTGCGGGAAGACCCGGACATTATTTTGGTGGGTGAACTGCGAGACCTTGAAACGATTCGTCTGG
CGCTGACGGCAGCTGAAACCGGCCACTTAGTATTTGGTACCCTGCACACCACCTCGGCGGCAAAAACCATTGACCGGGTG
GTTGACGTGTTTCCGGCCCAAGAAAAATCCATGGTGCGGTCGATGTTGTCTGAATCCTTACAGGCGGTTATCTCGCAAAC
CCTGATGAAGAAAATGGGCGGCGGGCGTATTGCTGCCCACGAAATCATGATTGGCACCTCGGCTATTCGCAACTTGATAC
GTGAAGACAAAATCGCGCAGATGTATTCGTCGATACAGACGGGCGGCTCGCTGGGCATGCAGACCCTGGACCAGTGTATG
GAACGCCTGTTGCAAAAGGGTCTTATCTCACGCGAACAAGCGCGTTTGAAAGCAAAAATGCCCGATGCCTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas stutzeri DSM 10701 |
88.081 |
100 |
0.881 |
| pilT | Pseudomonas aeruginosa PAK |
88.081 |
100 |
0.881 |
| pilT | Acinetobacter nosocomialis M2 |
82.267 |
100 |
0.823 |
| pilT | Acinetobacter baumannii D1279779 |
82.267 |
100 |
0.823 |
| pilT | Acinetobacter baumannii strain A118 |
82.267 |
100 |
0.823 |
| pilT | Acinetobacter baylyi ADP1 |
80.814 |
100 |
0.808 |
| pilT | Legionella pneumophila strain Lp02 |
76.647 |
97.093 |
0.744 |
| pilT | Legionella pneumophila strain ERS1305867 |
76.647 |
97.093 |
0.744 |
| pilT | Neisseria meningitidis 8013 |
66.765 |
98.837 |
0.66 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
66.471 |
98.837 |
0.657 |
| pilT | Vibrio cholerae strain A1552 |
66.471 |
98.837 |
0.657 |
| pilT | Neisseria gonorrhoeae MS11 |
66.471 |
98.837 |
0.657 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.014 |
100 |
0.512 |
| pilU | Acinetobacter baylyi ADP1 |
39.826 |
100 |
0.398 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.118 |
98.547 |
0.395 |
| pilU | Vibrio cholerae strain A1552 |
39.701 |
97.384 |
0.387 |