Detailed information
Bioinformatically predicted
Overview
| Name | pilU | Type | Machinery gene |
| Locus tag | MARPU_RS16135 | Genome accession | NZ_CP007031 |
| Coordinates | 3712713..3713768 (-) | Length | 351 a.a. |
| NCBI ID | WP_025275407.1 | Uniprot ID | W0E6Y6 |
| Organism | Marichromatium purpuratum 984 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3707713..3718768
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MARPU_RS16120 (MARPU_16435) | - | 3709090..3709359 (-) | 270 | WP_005224898.1 | transcriptional regulator | - |
| MARPU_RS16125 (MARPU_16440) | - | 3709599..3710912 (-) | 1314 | WP_005224899.1 | histone deacetylase | - |
| MARPU_RS16130 (MARPU_16445) | - | 3710906..3712582 (-) | 1677 | WP_005224900.1 | hydantoinase/oxoprolinase family protein | - |
| MARPU_RS16135 (MARPU_16450) | pilU | 3712713..3713768 (-) | 1056 | WP_025275407.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| MARPU_RS16140 (MARPU_16455) | pilU | 3713949..3715109 (-) | 1161 | WP_005224902.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| MARPU_RS16145 (MARPU_16460) | - | 3715276..3716742 (-) | 1467 | WP_005224903.1 | glutamate synthase subunit beta | - |
Sequence
Protein
Download Length: 351 a.a. Molecular weight: 38622.49 Da Isoelectric Point: 6.3679
>NTDB_id=116106 MARPU_RS16135 WP_025275407.1 3712713..3713768(-) (pilU) [Marichromatium purpuratum 984]
MDITPYLEMMIRHNASDLFLTPGMPVKIKIDGVIRPIGETVLTPTVCREALASLLDPAKAREFEEELEVDFAVALDNRAR
FRVNAYHQRGYPSMVLRYIRTTVPSCDELGLPAVLPKLIMHRRGIILMVGATGSGKSTTLAAMLDHRNSSAPGHIITIED
PIEFVHPHKQCIVSQRELGLDTKSYAKALKSALREAPDVVLIGEIRTRETMEAALELAGTGHLAVATLHANNAYQAMERI
INLFPQAQHKTLFTDLSVYLRAIVSQRLVRTQAGSRCAAIEVMVNTPHIADLIRDGQVEALGQAMQQSGEEGIRTFDDAL
LALYRDGTISLQEALDNADSAANLEARIHFG
MDITPYLEMMIRHNASDLFLTPGMPVKIKIDGVIRPIGETVLTPTVCREALASLLDPAKAREFEEELEVDFAVALDNRAR
FRVNAYHQRGYPSMVLRYIRTTVPSCDELGLPAVLPKLIMHRRGIILMVGATGSGKSTTLAAMLDHRNSSAPGHIITIED
PIEFVHPHKQCIVSQRELGLDTKSYAKALKSALREAPDVVLIGEIRTRETMEAALELAGTGHLAVATLHANNAYQAMERI
INLFPQAQHKTLFTDLSVYLRAIVSQRLVRTQAGSRCAAIEVMVNTPHIADLIRDGQVEALGQAMQQSGEEGIRTFDDAL
LALYRDGTISLQEALDNADSAANLEARIHFG
Nucleotide
Download Length: 1056 bp
>NTDB_id=116106 MARPU_RS16135 WP_025275407.1 3712713..3713768(-) (pilU) [Marichromatium purpuratum 984]
ATGGACATCACCCCCTATCTCGAGATGATGATCCGGCATAACGCCTCCGATCTCTTCCTCACCCCGGGCATGCCGGTGAA
GATCAAGATCGACGGCGTCATCCGCCCGATCGGCGAGACCGTGCTCACCCCGACGGTGTGTCGCGAGGCCCTGGCCTCGC
TGCTCGATCCGGCCAAGGCGCGCGAGTTCGAGGAGGAACTGGAGGTCGACTTCGCCGTCGCGCTCGACAATCGCGCCCGC
TTCCGCGTCAACGCCTATCACCAACGCGGCTACCCCTCGATGGTGCTGCGCTACATCCGCACCACCGTCCCCAGCTGCGA
CGAACTCGGGCTGCCGGCGGTGCTGCCCAAGCTGATCATGCACCGGCGCGGCATCATCCTCATGGTCGGGGCCACCGGCT
CGGGCAAGTCGACCACCCTTGCGGCGATGCTCGATCACCGCAACAGCAGCGCCCCGGGTCACATCATCACCATCGAGGAC
CCGATCGAGTTCGTCCATCCGCACAAGCAGTGCATCGTCAGTCAACGCGAACTCGGGCTCGACACCAAGAGCTACGCCAA
GGCGCTCAAGAGCGCGCTGCGCGAGGCCCCGGACGTGGTGCTGATCGGCGAGATCCGCACCCGCGAGACCATGGAGGCGG
CGCTCGAGCTAGCCGGCACCGGTCACCTCGCCGTCGCCACGCTGCACGCCAACAACGCCTATCAGGCGATGGAGCGCATC
ATCAACCTGTTCCCCCAGGCGCAGCACAAGACGCTGTTCACCGACCTCTCGGTCTATCTGCGCGCGATCGTCTCGCAGCG
CCTGGTACGCACCCAGGCCGGGTCGCGCTGCGCCGCGATCGAGGTCATGGTCAACACCCCGCACATCGCTGACCTGATCC
GCGACGGTCAGGTCGAGGCCCTCGGTCAGGCGATGCAGCAGAGCGGCGAGGAGGGCATCCGCACCTTCGACGACGCCCTG
CTCGCACTCTATCGCGACGGCACCATCTCGCTGCAGGAAGCACTCGACAATGCCGATTCCGCCGCCAACCTGGAGGCGAG
GATCCACTTCGGCTGA
ATGGACATCACCCCCTATCTCGAGATGATGATCCGGCATAACGCCTCCGATCTCTTCCTCACCCCGGGCATGCCGGTGAA
GATCAAGATCGACGGCGTCATCCGCCCGATCGGCGAGACCGTGCTCACCCCGACGGTGTGTCGCGAGGCCCTGGCCTCGC
TGCTCGATCCGGCCAAGGCGCGCGAGTTCGAGGAGGAACTGGAGGTCGACTTCGCCGTCGCGCTCGACAATCGCGCCCGC
TTCCGCGTCAACGCCTATCACCAACGCGGCTACCCCTCGATGGTGCTGCGCTACATCCGCACCACCGTCCCCAGCTGCGA
CGAACTCGGGCTGCCGGCGGTGCTGCCCAAGCTGATCATGCACCGGCGCGGCATCATCCTCATGGTCGGGGCCACCGGCT
CGGGCAAGTCGACCACCCTTGCGGCGATGCTCGATCACCGCAACAGCAGCGCCCCGGGTCACATCATCACCATCGAGGAC
CCGATCGAGTTCGTCCATCCGCACAAGCAGTGCATCGTCAGTCAACGCGAACTCGGGCTCGACACCAAGAGCTACGCCAA
GGCGCTCAAGAGCGCGCTGCGCGAGGCCCCGGACGTGGTGCTGATCGGCGAGATCCGCACCCGCGAGACCATGGAGGCGG
CGCTCGAGCTAGCCGGCACCGGTCACCTCGCCGTCGCCACGCTGCACGCCAACAACGCCTATCAGGCGATGGAGCGCATC
ATCAACCTGTTCCCCCAGGCGCAGCACAAGACGCTGTTCACCGACCTCTCGGTCTATCTGCGCGCGATCGTCTCGCAGCG
CCTGGTACGCACCCAGGCCGGGTCGCGCTGCGCCGCGATCGAGGTCATGGTCAACACCCCGCACATCGCTGACCTGATCC
GCGACGGTCAGGTCGAGGCCCTCGGTCAGGCGATGCAGCAGAGCGGCGAGGAGGGCATCCGCACCTTCGACGACGCCCTG
CTCGCACTCTATCGCGACGGCACCATCTCGCTGCAGGAAGCACTCGACAATGCCGATTCCGCCGCCAACCTGGAGGCGAG
GATCCACTTCGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilU | Pseudomonas stutzeri DSM 10701 |
50 |
100 |
0.501 |
| pilU | Vibrio cholerae strain A1552 |
51.014 |
98.291 |
0.501 |
| pilU | Acinetobacter baylyi ADP1 |
50 |
99.715 |
0.499 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
41.888 |
96.581 |
0.405 |
| pilT | Pseudomonas aeruginosa PAK |
41.279 |
98.006 |
0.405 |
| pilT | Acinetobacter nosocomialis M2 |
42.216 |
95.157 |
0.402 |
| pilT | Acinetobacter baumannii D1279779 |
42.216 |
95.157 |
0.402 |
| pilT | Acinetobacter baumannii strain A118 |
42.216 |
95.157 |
0.402 |
| pilT | Vibrio cholerae strain A1552 |
42.342 |
94.872 |
0.402 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
42.342 |
94.872 |
0.402 |
| pilT | Pseudomonas stutzeri DSM 10701 |
40.988 |
98.006 |
0.402 |
| pilT | Acinetobacter baylyi ADP1 |
41.617 |
95.157 |
0.396 |
| pilT | Legionella pneumophila strain Lp02 |
40.719 |
95.157 |
0.387 |
| pilT | Legionella pneumophila strain ERS1305867 |
40.719 |
95.157 |
0.387 |
| pilT | Neisseria gonorrhoeae MS11 |
39.42 |
98.291 |
0.387 |
| pilT | Neisseria meningitidis 8013 |
39.42 |
98.291 |
0.387 |