Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | CKW04_RS11080 | Genome accession | NZ_LT906442 |
| Coordinates | 2403190..2404224 (-) | Length | 344 a.a. |
| NCBI ID | WP_058479378.1 | Uniprot ID | A0A0W1AMR3 |
| Organism | Legionella waltersii strain NCTC13017 | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2398190..2409224
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CKW04_RS17350 | - | 2398686..2398823 (+) | 138 | WP_157737792.1 | hypothetical protein | - |
| CKW04_RS11070 (SAMEA4504053_02258) | - | 2399068..2402109 (+) | 3042 | WP_095197571.1 | hypothetical protein | - |
| CKW04_RS11075 (SAMEA4504053_02259) | rph | 2402245..2402952 (+) | 708 | WP_058479377.1 | ribonuclease PH | - |
| CKW04_RS11080 (SAMEA4504053_02260) | pilT | 2403190..2404224 (-) | 1035 | WP_058479378.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| CKW04_RS11085 (SAMEA4504053_02261) | - | 2404343..2405038 (+) | 696 | WP_058479410.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| CKW04_RS11090 (SAMEA4504053_02262) | proC | 2405035..2405823 (+) | 789 | WP_058479379.1 | pyrroline-5-carboxylate reductase | - |
| CKW04_RS11095 (SAMEA4504053_02263) | - | 2405989..2406564 (+) | 576 | WP_058479380.1 | YggT family protein | - |
| CKW04_RS11100 (SAMEA4504053_02264) | - | 2406606..2407208 (+) | 603 | WP_058479381.1 | DUF2845 domain-containing protein | - |
| CKW04_RS11105 (SAMEA4504053_02265) | - | 2407222..2407503 (+) | 282 | WP_058479382.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 38225.04 Da Isoelectric Point: 6.8354
>NTDB_id=1147246 CKW04_RS11080 WP_058479378.1 2403190..2404224(-) (pilT) [Legionella waltersii strain NCTC13017]
MDIAELLAFSVKNKSSDLHLSAGMPPMIRVDGDLRKINLPALEHKDVIKIVYDIMNDRQRKEYEEFLETDFSFEIPSLAR
FRVNAFNQGRGAAAVFRTIPSLILSMEDLGLPPIFKEMANFNRGLILVTGPTGSGKSTTLAAVIDYINSSRYEHILTVED
PVEFVHQSKKCLVNQREVHKDTLSFNAALRSALREDPDIILVGEMRDLETIRLAMTAAETGHLVFGTLHTNSATKTINRI
IDVFPAEEKSMVRSMLSESLQAVVAQSLLKKTGGGRVAALEIMMCTGAIRNLIREDKVAQMYSSIQTGQAKGMQTLDQHL
TELVNNNVISRHTAHEAAVNKSLF
MDIAELLAFSVKNKSSDLHLSAGMPPMIRVDGDLRKINLPALEHKDVIKIVYDIMNDRQRKEYEEFLETDFSFEIPSLAR
FRVNAFNQGRGAAAVFRTIPSLILSMEDLGLPPIFKEMANFNRGLILVTGPTGSGKSTTLAAVIDYINSSRYEHILTVED
PVEFVHQSKKCLVNQREVHKDTLSFNAALRSALREDPDIILVGEMRDLETIRLAMTAAETGHLVFGTLHTNSATKTINRI
IDVFPAEEKSMVRSMLSESLQAVVAQSLLKKTGGGRVAALEIMMCTGAIRNLIREDKVAQMYSSIQTGQAKGMQTLDQHL
TELVNNNVISRHTAHEAAVNKSLF
Nucleotide
Download Length: 1035 bp
>NTDB_id=1147246 CKW04_RS11080 WP_058479378.1 2403190..2404224(-) (pilT) [Legionella waltersii strain NCTC13017]
ATGGATATTGCAGAACTTTTGGCATTTTCAGTTAAAAACAAATCGTCAGACTTGCATCTGTCTGCTGGTATGCCACCAAT
GATTCGTGTGGATGGAGACCTGCGTAAAATCAATTTACCTGCTCTAGAGCATAAGGATGTCATAAAGATTGTGTATGACA
TCATGAATGATCGACAAAGAAAAGAATATGAAGAATTTTTAGAAACAGACTTTTCTTTTGAAATACCTAGTTTAGCTCGT
TTTAGGGTGAATGCCTTTAACCAAGGCAGGGGTGCAGCAGCAGTATTTCGTACAATTCCTTCATTGATTCTTAGTATGGA
GGATTTAGGATTACCACCGATATTTAAAGAAATGGCCAATTTTAATCGTGGATTAATTTTAGTCACAGGACCGACTGGTT
CAGGTAAAAGTACTACTCTTGCAGCAGTCATCGATTACATCAACTCATCTCGCTATGAGCACATTTTAACCGTTGAGGAC
CCAGTGGAATTTGTGCATCAAAGTAAAAAATGCCTTGTTAACCAGCGTGAAGTGCATAAAGACACACTGAGTTTCAATGC
CGCATTACGCTCAGCACTGCGTGAAGACCCGGATATCATACTGGTAGGGGAAATGCGAGACCTGGAAACCATACGTTTGG
CCATGACAGCAGCTGAAACAGGACATTTAGTGTTCGGAACACTGCATACGAACTCAGCGACTAAAACGATTAACCGTATC
ATCGATGTATTCCCTGCAGAGGAAAAATCAATGGTCCGTTCCATGCTTTCTGAATCCCTTCAAGCAGTGGTTGCACAAAG
TTTATTGAAAAAGACTGGCGGGGGAAGGGTGGCAGCACTAGAAATCATGATGTGCACTGGAGCAATTAGGAACCTGATTC
GCGAAGACAAGGTTGCTCAGATGTATTCTTCGATTCAAACTGGTCAAGCGAAAGGGATGCAGACTTTGGATCAACATTTG
ACAGAATTGGTTAACAATAATGTTATATCGCGTCATACTGCTCATGAGGCAGCGGTCAATAAGTCATTGTTTTAG
ATGGATATTGCAGAACTTTTGGCATTTTCAGTTAAAAACAAATCGTCAGACTTGCATCTGTCTGCTGGTATGCCACCAAT
GATTCGTGTGGATGGAGACCTGCGTAAAATCAATTTACCTGCTCTAGAGCATAAGGATGTCATAAAGATTGTGTATGACA
TCATGAATGATCGACAAAGAAAAGAATATGAAGAATTTTTAGAAACAGACTTTTCTTTTGAAATACCTAGTTTAGCTCGT
TTTAGGGTGAATGCCTTTAACCAAGGCAGGGGTGCAGCAGCAGTATTTCGTACAATTCCTTCATTGATTCTTAGTATGGA
GGATTTAGGATTACCACCGATATTTAAAGAAATGGCCAATTTTAATCGTGGATTAATTTTAGTCACAGGACCGACTGGTT
CAGGTAAAAGTACTACTCTTGCAGCAGTCATCGATTACATCAACTCATCTCGCTATGAGCACATTTTAACCGTTGAGGAC
CCAGTGGAATTTGTGCATCAAAGTAAAAAATGCCTTGTTAACCAGCGTGAAGTGCATAAAGACACACTGAGTTTCAATGC
CGCATTACGCTCAGCACTGCGTGAAGACCCGGATATCATACTGGTAGGGGAAATGCGAGACCTGGAAACCATACGTTTGG
CCATGACAGCAGCTGAAACAGGACATTTAGTGTTCGGAACACTGCATACGAACTCAGCGACTAAAACGATTAACCGTATC
ATCGATGTATTCCCTGCAGAGGAAAAATCAATGGTCCGTTCCATGCTTTCTGAATCCCTTCAAGCAGTGGTTGCACAAAG
TTTATTGAAAAAGACTGGCGGGGGAAGGGTGGCAGCACTAGAAATCATGATGTGCACTGGAGCAATTAGGAACCTGATTC
GCGAAGACAAGGTTGCTCAGATGTATTCTTCGATTCAAACTGGTCAAGCGAAAGGGATGCAGACTTTGGATCAACATTTG
ACAGAATTGGTTAACAATAATGTTATATCGCGTCATACTGCTCATGAGGCAGCGGTCAATAAGTCATTGTTTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Legionella pneumophila strain Lp02 |
94.186 |
100 |
0.942 |
| pilT | Legionella pneumophila strain ERS1305867 |
94.186 |
100 |
0.942 |
| pilT | Acinetobacter nosocomialis M2 |
77.035 |
100 |
0.77 |
| pilT | Acinetobacter baumannii D1279779 |
77.035 |
100 |
0.77 |
| pilT | Acinetobacter baumannii strain A118 |
77.035 |
100 |
0.77 |
| pilT | Pseudomonas stutzeri DSM 10701 |
75.444 |
98.256 |
0.741 |
| pilT | Pseudomonas aeruginosa PAK |
75.148 |
98.256 |
0.738 |
| pilT | Acinetobacter baylyi ADP1 |
73.547 |
100 |
0.735 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
68.389 |
95.64 |
0.654 |
| pilT | Vibrio cholerae strain A1552 |
68.389 |
95.64 |
0.654 |
| pilT | Neisseria meningitidis 8013 |
65.396 |
99.128 |
0.648 |
| pilT | Neisseria gonorrhoeae MS11 |
65.103 |
99.128 |
0.645 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
49.275 |
100 |
0.494 |
| pilU | Vibrio cholerae strain A1552 |
42.183 |
98.547 |
0.416 |
| pilU | Pseudomonas stutzeri DSM 10701 |
41.975 |
94.186 |
0.395 |
| pilU | Acinetobacter baylyi ADP1 |
39.458 |
96.512 |
0.381 |