Detailed information NTG1145324

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: DXE27_RS03285
• Genome accession: NZ_LT615227
• Coordinates: 634186..634725 (+)
• Length: 179 a.a.
• NCBI ID: WP_269459827.1
• Uniprot ID: -
• Organism: Polynucleobacter necessarius isolate PPGSP8
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 629186..639725

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DXE27_RS03260	-	629827..630408 (-)	582	WP_128112889.1	DUF4390 domain-containing protein	-
DXE27_RS03265	rsmB	630405..631721 (-)	1317	WP_128112890.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
DXE27_RS03270	htpX	631723..632589 (-)	867	WP_128112891.1	zinc metalloprotease HtpX	-
DXE27_RS03275	fmt	632592..633590 (-)	999	WP_128112892.1	methionyl-tRNA formyltransferase	-
DXE27_RS03280	def	633599..634114 (-)	516	WP_128112893.1	peptide deformylase	-
DXE27_RS03285	dprA	634186..634725 (+)	540	WP_269459827.1	DNA-processing protein DprA	Machinery gene
DXE27_RS10400	dprA	634755..634865 (+)	111	WP_415064440.1	hypothetical protein	Machinery gene
DXE27_RS03290	-	635093..637765 (+)	2673	WP_231969633.1	DNA topoisomerase III	-
DXE27_RS10405	-	637773..638815 (-)	1043	Protein_694	FAD-dependent oxidoreductase	-

Sequence

Protein

• Length: 179 a.a.
• Molecular weight: 18985.18 Da
• Isoelectric Point: 10.5571

>NTDB_id=1145324 DXE27_RS03285 WP_269459827.1 634186..634725(+) (dprA) [Polynucleobacter necessarius isolate PPGSP8]
MQTIKPSDPIVKIARGTKYYPARLNDLHDPPSNLYIKGDVHLLRQPMIAIVGSRNASAEGLQNSSVLAKALARAGLLILS
GMAKGVDGAAHRACIELGVNHFTGAVFGTGVDVIYPREHVGLAKTISQQGLLLSEFPPGTGAQRLHFPRRNRIIAALALG
VVVVEAAEKSGSLLLLLRA

Nucleotide

• Length: 540 bp

>NTDB_id=1145324 DXE27_RS03285 WP_269459827.1 634186..634725(+) (dprA) [Polynucleobacter necessarius isolate PPGSP8]
ATGCAGACAATAAAACCATCCGACCCGATCGTCAAAATTGCACGCGGGACCAAATATTACCCGGCGCGTTTAAATGATTT
ACATGACCCGCCCAGCAATCTATATATAAAAGGGGATGTCCACTTGCTGCGCCAGCCCATGATCGCCATCGTCGGCTCTC
GAAACGCCAGCGCCGAAGGCCTACAAAACTCGAGTGTGCTGGCTAAGGCGCTAGCTCGGGCAGGCCTGCTTATCCTCTCT
GGGATGGCAAAAGGGGTTGATGGCGCAGCCCATAGAGCTTGTATTGAATTGGGGGTGAATCACTTCACGGGCGCCGTATT
TGGGACGGGCGTTGATGTTATTTATCCCAGGGAACATGTTGGGCTAGCAAAAACAATTAGCCAGCAGGGGCTTTTGTTGT
CTGAATTTCCTCCGGGAACTGGGGCCCAGCGCCTTCACTTTCCAAGGCGCAACAGAATCATTGCAGCCCTAGCCCTGGGT
GTCGTGGTGGTTGAGGCCGCCGAAAAATCAGGCTCTCTTCTCTTATTACTGCGCGCCTAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (13-174)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Legionella pneumophila strain ERS1305867	46.809	100	0.492
dprA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	44	97.765	0.43
dprA	Vibrio cholerae strain A1552	49.677	86.592	0.43
dprA	Bacillus subtilis subsp. subtilis str. 168	44.444	95.531	0.425
dprA	Acinetobacter baylyi ADP1	42.373	98.883	0.419
dprA	Vibrio campbellii strain DS40M4	48.387	86.592	0.419
dprA	Acinetobacter baumannii D1279779	45.342	89.944	0.408
dprA/cilB/dalA	Streptococcus mitis SK321	45	89.385	0.402
dprA	Streptococcus mutans UA159	44.444	90.503	0.402
dprA	Acinetobacter baumannii strain A118	44.72	89.944	0.402
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	44.375	89.385	0.397
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	44.375	89.385	0.397
dprA/cilB/dalA	Streptococcus pneumoniae D39	44.375	89.385	0.397
dprA/cilB/dalA	Streptococcus pneumoniae R6	44.375	89.385	0.397
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	44.375	89.385	0.397
dprA	Neisseria gonorrhoeae strain FA1090	44.516	86.592	0.385
dprA	Neisseria gonorrhoeae MS11	44.516	86.592	0.385
dprA	Neisseria meningitidis strain C311	43.871	86.592	0.38
dprA	Neisseria meningitidis MC58	43.871	86.592	0.38
dprA	Thermus thermophilus HB27	43.871	86.592	0.38
dprA	Glaesserella parasuis strain SC1401	42.675	87.709	0.374
dprA	Lactococcus lactis subsp. cremoris KW2	41.25	89.385	0.369
dprA	Haemophilus influenzae Rd KW20	42.038	87.709	0.369