Detailed information NTG1142094

Bioinformatically predicted

Overview

• Name: comGC/cglC
• Type: Machinery gene
• Locus tag: DQL01_RS10625
• Genome accession: NZ_LS483451
• Coordinates: 1971304..1971630 (-)
• Length: 108 a.a.
• NCBI ID: WP_000738634.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 4041STDY6836166
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1966304..1976630

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL01_RS10585	rnpA	1966322..1966693 (-)	372	WP_000739241.1	ribonuclease P protein component	-
DQL01_RS10590	-	1966841..1968031 (-)	1191	WP_000167766.1	acetate kinase	-
DQL01_RS10595	comYH	1968082..1969035 (-)	954	WP_000345119.1	class I SAM-dependent methyltransferase	Machinery gene
DQL01_RS10600	-	1969096..1969690 (-)	595	Protein_1996	class I SAM-dependent methyltransferase	-
DQL01_RS10605	comGG/cglG	1969827..1970240 (-)	414	WP_050114148.1	competence type IV pilus minor pilin ComGG	Machinery gene
DQL01_RS10610	comGF/cglF	1970218..1970679 (-)	462	WP_050114150.1	competence type IV pilus minor pilin ComGF	Machinery gene
DQL01_RS10615	comGE/cglE	1970642..1970944 (-)	303	WP_188109891.1	competence type IV pilus minor pilin ComGE	Machinery gene
DQL01_RS10620	comGD/cglD	1970907..1971311 (-)	405	WP_000588022.1	competence type IV pilus minor pilin ComGD	Machinery gene
DQL01_RS10625	comGC/cglC	1971304..1971630 (-)	327	WP_000738634.1	comG operon protein ComGC	Machinery gene
DQL01_RS10630	comGB/cglB	1971632..1972648 (-)	1017	WP_074017570.1	competence type IV pilus assembly protein ComGB	Machinery gene
DQL01_RS10635	comGA/cglA/cilD	1972596..1973537 (-)	942	WP_000249571.1	competence type IV pilus ATPase ComGA	Machinery gene
DQL01_RS10640	-	1973613..1973978 (-)	366	WP_000286415.1	DUF1033 family protein	-
DQL01_RS10645	-	1974129..1975187 (-)	1059	WP_000649466.1	zinc-dependent alcohol dehydrogenase family protein	-
DQL01_RS10650	nagA	1975350..1976501 (-)	1152	WP_061753289.1	N-acetylglucosamine-6-phosphate deacetylase	-

Sequence

Protein

• Length: 108 a.a.
• Molecular weight: 12189.35 Da
• Isoelectric Point: 10.0305

>NTDB_id=1142094 DQL01_RS10625 WP_000738634.1 1971304..1971630(-) (comGC/cglC) [Streptococcus pneumoniae strain 4041STDY6836166]
MKKMMTFLKKAKVKAFTLVEMLVVLLIISVLFLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLEKNEDASLSKLKE
DGRITEEQAKAYKEYHDKNGGANRKVND

Nucleotide

• Length: 327 bp

>NTDB_id=1142094 DQL01_RS10625 WP_000738634.1 1971304..1971630(-) (comGC/cglC) [Streptococcus pneumoniae strain 4041STDY6836166]
ATGAAAAAAATGATGACATTCTTGAAAAAAGCTAAGGTTAAAGCTTTTACATTGGTGGAAATGTTGGTGGTCTTGCTGAT
TATCAGCGTGCTTTTCTTGCTCTTTGTACCTAATCTGACCAAGCAAAAAGAAGCAGTCAATGACAAAGGAAAAGCAGCTG
TTGTTAAGGTGGTGGAAAGCCAGGCAGAACTTTATAGCTTGGAAAAGAATGAAGATGCTAGCCTAAGCAAGTTAAAAGAA
GATGGACGCATCACGGAAGAACAGGCTAAAGCTTATAAAGAATACCATGATAAAAATGGAGGAGCAAATCGTAAAGTCAA
TGATTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (11-34)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC/cglC	Streptococcus pneumoniae Rx1	97.222	100	0.972
comGC/cglC	Streptococcus pneumoniae D39	97.222	100	0.972
comGC/cglC	Streptococcus pneumoniae R6	97.222	100	0.972
comGC/cglC	Streptococcus pneumoniae TIGR4	96.296	100	0.963
comGC/cglC	Streptococcus mitis SK321	93.519	100	0.935
comGC/cglC	Streptococcus mitis NCTC 12261	91.176	94.444	0.861
comYC	Streptococcus gordonii str. Challis substr. CH1	67.961	95.37	0.648
comYC	Streptococcus mutans UA159	62.745	94.444	0.593
comYC	Streptococcus mutans UA140	62.745	94.444	0.593
comGC	Lactococcus lactis subsp. cremoris KW2	54.902	94.444	0.519
comYC	Streptococcus suis isolate S10	67.901	75	0.509
comGC	Staphylococcus aureus MW2	48.837	79.63	0.389
comGC	Staphylococcus aureus N315	48.837	79.63	0.389
comGC	Latilactobacillus sakei subsp. sakei 23K	45.349	79.63	0.361