Detailed information NTG1142091

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: DQL01_RS10610
• Genome accession: NZ_LS483451
• Coordinates: 1970218..1970679 (-)
• Length: 153 a.a.
• NCBI ID: WP_050114150.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 4041STDY6836166
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1965218..1975679

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL01_RS10580	-	1965523..1966347 (-)	825	WP_000727904.1	membrane protein insertase YidC	-
DQL01_RS10585	rnpA	1966322..1966693 (-)	372	WP_000739241.1	ribonuclease P protein component	-
DQL01_RS10590	-	1966841..1968031 (-)	1191	WP_000167766.1	acetate kinase	-
DQL01_RS10595	comYH	1968082..1969035 (-)	954	WP_000345119.1	class I SAM-dependent methyltransferase	Machinery gene
DQL01_RS10600	-	1969096..1969690 (-)	595	Protein_1996	class I SAM-dependent methyltransferase	-
DQL01_RS10605	comGG/cglG	1969827..1970240 (-)	414	WP_050114148.1	competence type IV pilus minor pilin ComGG	Machinery gene
DQL01_RS10610	comGF/cglF	1970218..1970679 (-)	462	WP_050114150.1	competence type IV pilus minor pilin ComGF	Machinery gene
DQL01_RS10615	comGE/cglE	1970642..1970944 (-)	303	WP_188109891.1	competence type IV pilus minor pilin ComGE	Machinery gene
DQL01_RS10620	comGD/cglD	1970907..1971311 (-)	405	WP_000588022.1	competence type IV pilus minor pilin ComGD	Machinery gene
DQL01_RS10625	comGC/cglC	1971304..1971630 (-)	327	WP_000738634.1	comG operon protein ComGC	Machinery gene
DQL01_RS10630	comGB/cglB	1971632..1972648 (-)	1017	WP_074017570.1	competence type IV pilus assembly protein ComGB	Machinery gene
DQL01_RS10635	comGA/cglA/cilD	1972596..1973537 (-)	942	WP_000249571.1	competence type IV pilus ATPase ComGA	Machinery gene
DQL01_RS10640	-	1973613..1973978 (-)	366	WP_000286415.1	DUF1033 family protein	-
DQL01_RS10645	-	1974129..1975187 (-)	1059	WP_000649466.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17904.56 Da
• Isoelectric Point: 9.3137

>NTDB_id=1142091 DQL01_RS10610 WP_050114150.1 1970218..1970679(-) (comGF/cglF) [Streptococcus pneumoniae strain 4041STDY6836166]
MVQNSCWQSKSHKVKAFTLLESLLALIVISGGLLLFQAMSQLLISEVRYQQQSEQKEWLLFVDQLEAELDRSQFEKVEGN
RLYMKQDGKEIAMGKSKADDFRKTNARGRGYQPMVYGLKSAQITEDNQLVRFHFQFQKGLEREFIYRVEKEKS

Nucleotide

• Length: 462 bp

>NTDB_id=1142091 DQL01_RS10610 WP_050114150.1 1970218..1970679(-) (comGF/cglF) [Streptococcus pneumoniae strain 4041STDY6836166]
ATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAAGGTCAAGGCTTTTACCTTGTTAGAATCCCTGCTTGCCCTGAT
TGTCATCAGTGGGGGATTACTCCTTTTTCAAGCTATGAGTCAGCTCCTCATTTCAGAAGTTCGCTACCAGCAACAAAGCG
AGCAAAAGGAGTGGCTCTTGTTTGTGGACCAACTTGAGGCAGAATTAGACCGTTCGCAGTTCGAAAAAGTAGAAGGCAAT
CGCCTATACATGAAGCAAGATGGCAAGGAGATTGCTATGGGTAAGTCTAAGGCAGATGATTTCCGTAAAACGAATGCTCG
TGGTCGAGGTTATCAGCCTATGGTTTATGGCCTCAAATCAGCTCAGATTACAGAAGACAATCAACTGGTTCGCTTTCATT
TCCAGTTCCAAAAAGGCTTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	96.078	100	0.961
comGF/cglF	Streptococcus pneumoniae D39	96.078	100	0.961
comGF/cglF	Streptococcus pneumoniae R6	96.078	100	0.961
comGF/cglF	Streptococcus pneumoniae TIGR4	96.078	100	0.961
comGF/cglF	Streptococcus mitis NCTC 12261	90.85	100	0.909
comGF/cglF	Streptococcus mitis SK321	90.85	100	0.909
comYF	Streptococcus mutans UA159	41.791	87.582	0.366
comYF	Streptococcus mutans UA140	41.791	87.582	0.366