Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | JMV70_RS06190 | Genome accession | NZ_LR884459 |
| Coordinates | 1583700..1584737 (+) | Length | 345 a.a. |
| NCBI ID | WP_201500013.1 | Uniprot ID | - |
| Organism | Psychrobacter arenosus isolate Psychrobacter arenosus R7 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1578700..1589737
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMV70_RS06175 | - | 1579168..1580838 (+) | 1671 | WP_201497985.1 | NAD+ synthase | - |
| JMV70_RS06180 | - | 1581024..1582301 (+) | 1278 | WP_201497986.1 | hemolysin family protein | - |
| JMV70_RS06185 | - | 1582417..1583136 (-) | 720 | WP_201500012.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| JMV70_RS06190 | pilT | 1583700..1584737 (+) | 1038 | WP_201500013.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| JMV70_RS06195 | pilU | 1584850..1585971 (+) | 1122 | WP_201497987.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| JMV70_RS06200 | fur | 1586266..1586703 (-) | 438 | WP_201497988.1 | ferric iron uptake transcriptional regulator | - |
| JMV70_RS06205 | - | 1587214..1587639 (+) | 426 | WP_406947262.1 | outer membrane protein assembly factor BamE | - |
| JMV70_RS06210 | - | 1587700..1588098 (-) | 399 | WP_227676401.1 | RnfH family protein | - |
| JMV70_RS06215 | - | 1588147..1589274 (-) | 1128 | WP_201497990.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 38309.95 Da Isoelectric Point: 6.5979
>NTDB_id=1133176 JMV70_RS06190 WP_201500013.1 1583700..1584737(+) (pilT) [Psychrobacter arenosus isolate Psychrobacter arenosus R7]
MSIEDLLRFSVKQNASDLHISAGLPAMIRVDGEITRINMPPLSHQTVHQLIYDIMNDRQRANFEEFYETDFSFEISGLAR
FRVNAFNQNRGAGAVLRTIPSKVLTMEELGMGEVFERMANFKRGIVLVTGPTGSGKSTTLAAMINYINETRKEHILTIED
PIEFVHESKKSLVNQREVHRDTLGFDEALRSALREDPDVILVGEMRDLETIRLALSAAETGHLVFGTLHTSSAAKTIDRI
IDVFPAAEKDMIRAMLSESLQAIVSQTLLKRSTGGRVAAHEIMLGTPAIRNLVRENKIAQMYSAIQTGAGDGMITLDQTL
KNLVQKGTITKEAARPYAKQPDAFV
MSIEDLLRFSVKQNASDLHISAGLPAMIRVDGEITRINMPPLSHQTVHQLIYDIMNDRQRANFEEFYETDFSFEISGLAR
FRVNAFNQNRGAGAVLRTIPSKVLTMEELGMGEVFERMANFKRGIVLVTGPTGSGKSTTLAAMINYINETRKEHILTIED
PIEFVHESKKSLVNQREVHRDTLGFDEALRSALREDPDVILVGEMRDLETIRLALSAAETGHLVFGTLHTSSAAKTIDRI
IDVFPAAEKDMIRAMLSESLQAIVSQTLLKRSTGGRVAAHEIMLGTPAIRNLVRENKIAQMYSAIQTGAGDGMITLDQTL
KNLVQKGTITKEAARPYAKQPDAFV
Nucleotide
Download Length: 1038 bp
>NTDB_id=1133176 JMV70_RS06190 WP_201500013.1 1583700..1584737(+) (pilT) [Psychrobacter arenosus isolate Psychrobacter arenosus R7]
ATCAGTATCGAAGACCTTTTACGTTTTTCTGTGAAGCAAAATGCTTCGGATTTGCATATCTCGGCTGGCTTACCTGCCAT
GATTCGTGTTGATGGTGAAATTACCCGTATTAATATGCCTCCTTTGAGTCATCAAACTGTGCATCAGCTTATTTATGACA
TTATGAATGACCGACAACGGGCTAATTTTGAAGAGTTTTATGAGACGGATTTTTCTTTTGAAATCTCTGGTCTGGCTCGT
TTCCGTGTCAATGCTTTCAACCAAAACCGTGGGGCCGGGGCGGTCTTACGTACCATTCCTTCTAAAGTACTGACTATGGA
AGAGTTAGGTATGGGAGAAGTGTTTGAGCGTATGGCCAATTTTAAACGCGGCATAGTCTTGGTCACAGGGCCTACAGGGT
CTGGTAAATCAACCACCTTGGCCGCTATGATTAATTATATTAATGAAACCCGTAAAGAGCATATCCTAACGATTGAAGAC
CCTATCGAATTTGTCCATGAATCCAAAAAAAGCTTGGTTAACCAACGTGAAGTCCACCGCGATACTTTAGGGTTTGATGA
GGCACTGCGCTCGGCTTTACGTGAAGATCCAGACGTCATTCTCGTCGGGGAGATGCGTGACCTTGAGACCATTCGTTTGG
CGCTAAGCGCTGCGGAAACCGGTCACTTAGTCTTTGGGACGCTACATACCAGCTCAGCCGCTAAAACTATTGACCGTATT
ATCGATGTCTTCCCAGCTGCAGAAAAAGACATGATTCGGGCCATGTTGTCTGAATCCTTACAGGCTATCGTCTCGCAGAC
CCTGCTTAAACGCAGTACGGGTGGCCGAGTGGCGGCTCATGAGATTATGTTGGGCACCCCAGCTATTCGTAACTTGGTCC
GTGAAAACAAGATTGCTCAGATGTACTCTGCCATTCAAACGGGCGCTGGCGATGGCATGATTACTTTAGACCAAACCCTT
AAGAATTTAGTGCAAAAAGGCACTATCACTAAAGAGGCAGCGCGACCTTATGCTAAGCAACCTGATGCTTTCGTTTAA
ATCAGTATCGAAGACCTTTTACGTTTTTCTGTGAAGCAAAATGCTTCGGATTTGCATATCTCGGCTGGCTTACCTGCCAT
GATTCGTGTTGATGGTGAAATTACCCGTATTAATATGCCTCCTTTGAGTCATCAAACTGTGCATCAGCTTATTTATGACA
TTATGAATGACCGACAACGGGCTAATTTTGAAGAGTTTTATGAGACGGATTTTTCTTTTGAAATCTCTGGTCTGGCTCGT
TTCCGTGTCAATGCTTTCAACCAAAACCGTGGGGCCGGGGCGGTCTTACGTACCATTCCTTCTAAAGTACTGACTATGGA
AGAGTTAGGTATGGGAGAAGTGTTTGAGCGTATGGCCAATTTTAAACGCGGCATAGTCTTGGTCACAGGGCCTACAGGGT
CTGGTAAATCAACCACCTTGGCCGCTATGATTAATTATATTAATGAAACCCGTAAAGAGCATATCCTAACGATTGAAGAC
CCTATCGAATTTGTCCATGAATCCAAAAAAAGCTTGGTTAACCAACGTGAAGTCCACCGCGATACTTTAGGGTTTGATGA
GGCACTGCGCTCGGCTTTACGTGAAGATCCAGACGTCATTCTCGTCGGGGAGATGCGTGACCTTGAGACCATTCGTTTGG
CGCTAAGCGCTGCGGAAACCGGTCACTTAGTCTTTGGGACGCTACATACCAGCTCAGCCGCTAAAACTATTGACCGTATT
ATCGATGTCTTCCCAGCTGCAGAAAAAGACATGATTCGGGCCATGTTGTCTGAATCCTTACAGGCTATCGTCTCGCAGAC
CCTGCTTAAACGCAGTACGGGTGGCCGAGTGGCGGCTCATGAGATTATGTTGGGCACCCCAGCTATTCGTAACTTGGTCC
GTGAAAACAAGATTGCTCAGATGTACTCTGCCATTCAAACGGGCGCTGGCGATGGCATGATTACTTTAGACCAAACCCTT
AAGAATTTAGTGCAAAAAGGCACTATCACTAAAGAGGCAGCGCGACCTTATGCTAAGCAACCTGATGCTTTCGTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
77.616 |
99.71 |
0.774 |
| pilT | Acinetobacter nosocomialis M2 |
75.942 |
100 |
0.759 |
| pilT | Acinetobacter baumannii D1279779 |
75.942 |
100 |
0.759 |
| pilT | Acinetobacter baumannii strain A118 |
75.942 |
100 |
0.759 |
| pilT | Pseudomonas stutzeri DSM 10701 |
75.872 |
99.71 |
0.757 |
| pilT | Acinetobacter baylyi ADP1 |
74.419 |
99.71 |
0.742 |
| pilT | Legionella pneumophila strain Lp02 |
71.221 |
99.71 |
0.71 |
| pilT | Legionella pneumophila strain ERS1305867 |
71.221 |
99.71 |
0.71 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
66.869 |
95.362 |
0.638 |
| pilT | Vibrio cholerae strain A1552 |
66.869 |
95.362 |
0.638 |
| pilT | Neisseria gonorrhoeae MS11 |
63.478 |
100 |
0.635 |
| pilT | Neisseria meningitidis 8013 |
63.478 |
100 |
0.635 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.754 |
100 |
0.528 |
| pilU | Pseudomonas stutzeri DSM 10701 |
43.068 |
98.261 |
0.423 |
| pilU | Vibrio cholerae strain A1552 |
41.194 |
97.101 |
0.4 |
| pilU | Acinetobacter baylyi ADP1 |
40.116 |
99.71 |
0.4 |