Detailed information
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | G3W89_RS02655 | Genome accession | NZ_LR594659 |
| Coordinates | 543261..544304 (-) | Length | 347 a.a. |
| NCBI ID | WP_162572647.1 | Uniprot ID | A0A6P2E0C7 |
| Organism | Variovorax sp. PBL-H6 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 538261..549304
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G3W89_RS02630 (H6CHR_00523) | - | 538497..538862 (+) | 366 | WP_162577291.1 | YraN family protein | - |
| G3W89_RS02635 (H6CHR_00524) | - | 538955..539584 (+) | 630 | WP_162572643.1 | SIS domain-containing protein | - |
| G3W89_RS02640 (H6CHR_00525) | - | 539581..540324 (+) | 744 | WP_162572644.1 | BON domain-containing protein | - |
| G3W89_RS02645 (H6CHR_00526) | - | 540617..541537 (-) | 921 | WP_162572645.1 | NAD(P)-dependent oxidoreductase | - |
| G3W89_RS02650 (H6CHR_00527) | pilU | 541573..542709 (-) | 1137 | WP_162572646.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| G3W89_RS02655 (H6CHR_00528) | pilT | 543261..544304 (-) | 1044 | WP_162572647.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| G3W89_RS02660 (H6CHR_00529) | - | 544342..545028 (+) | 687 | WP_162577292.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| G3W89_RS02665 (H6CHR_00530) | - | 545120..548083 (+) | 2964 | WP_162572648.1 | L-glutamate gamma-semialdehyde dehydrogenase | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 38081.82 Da Isoelectric Point: 6.8845
>NTDB_id=1128163 G3W89_RS02655 WP_162572647.1 543261..544304(-) (pilT) [Variovorax sp. PBL-H6]
MDITQLLAFSVKNKASDLHLSSGLPPMIRVHGDVRRINVDALDHKAVHAMVYDIMSDTHRKHYEEFLEVDFSFEIDGLAR
FRVNAFNQARGAAAVFRTIPSKILTLEQLNAPKIFGDLALKPRGLVLVTGPTGSGKSTTLAAMINFLNETEYGHILTVED
PIEFVHESKKCLINQREVGPMTLSFANALRSALREDPDAILVGEMRDLETIRLAMTAAETGHLVFGTLHTSSAAKTIDRI
IDVFPGEEKEMIRAMLSESLQAVVSQTLCKTKDGQGRVAAHEIMLGTSAIRNLIREGKVAQMYSSIQTGSGQGMQTLDQC
LTDLVRRNVISAAEARGKAKIPENFPG
MDITQLLAFSVKNKASDLHLSSGLPPMIRVHGDVRRINVDALDHKAVHAMVYDIMSDTHRKHYEEFLEVDFSFEIDGLAR
FRVNAFNQARGAAAVFRTIPSKILTLEQLNAPKIFGDLALKPRGLVLVTGPTGSGKSTTLAAMINFLNETEYGHILTVED
PIEFVHESKKCLINQREVGPMTLSFANALRSALREDPDAILVGEMRDLETIRLAMTAAETGHLVFGTLHTSSAAKTIDRI
IDVFPGEEKEMIRAMLSESLQAVVSQTLCKTKDGQGRVAAHEIMLGTSAIRNLIREGKVAQMYSSIQTGSGQGMQTLDQC
LTDLVRRNVISAAEARGKAKIPENFPG
Nucleotide
Download Length: 1044 bp
>NTDB_id=1128163 G3W89_RS02655 WP_162572647.1 543261..544304(-) (pilT) [Variovorax sp. PBL-H6]
GTGGACATCACCCAACTGCTGGCCTTCAGCGTGAAGAACAAGGCCTCGGACTTGCATCTGTCATCCGGCCTGCCACCCAT
GATCCGCGTGCACGGCGACGTGCGGCGCATCAACGTCGACGCGCTCGACCACAAGGCCGTGCACGCCATGGTGTACGACA
TCATGAGCGACACGCACCGCAAGCACTACGAAGAATTCCTCGAGGTCGACTTCTCCTTCGAGATCGACGGCCTCGCGCGC
TTCCGCGTCAATGCCTTTAACCAGGCGCGCGGCGCGGCGGCGGTGTTCCGGACCATTCCGTCCAAGATCCTCACGCTGGA
GCAGCTCAACGCGCCGAAGATTTTCGGCGACCTCGCCCTCAAGCCCCGCGGCCTGGTGCTGGTGACCGGCCCCACCGGCT
CGGGCAAGTCCACCACGTTGGCCGCGATGATCAACTTCCTCAACGAGACCGAGTACGGCCACATCCTGACGGTGGAGGAC
CCGATCGAGTTCGTGCACGAATCGAAGAAGTGCCTGATCAACCAGCGCGAGGTCGGGCCGATGACGCTGTCCTTCGCCAA
TGCGCTGCGTTCGGCGCTTCGCGAGGACCCCGACGCGATCCTGGTTGGCGAAATGCGCGACCTGGAGACCATCCGCCTCG
CCATGACTGCGGCCGAGACGGGCCACCTGGTGTTCGGCACCCTGCACACCTCCTCGGCCGCCAAGACGATCGACCGGATC
ATCGACGTGTTCCCGGGCGAGGAGAAGGAAATGATCCGCGCCATGCTGTCGGAGTCGCTGCAGGCCGTGGTCTCGCAGAC
CCTGTGCAAGACCAAGGACGGCCAGGGCCGGGTGGCGGCGCACGAAATCATGCTGGGCACCTCGGCCATCCGCAACCTGA
TCCGCGAAGGCAAGGTGGCGCAGATGTATTCCTCGATCCAGACCGGCAGCGGCCAGGGCATGCAGACGCTGGACCAGTGC
CTGACGGACCTTGTGCGGCGCAATGTCATTTCCGCCGCAGAAGCCCGCGGCAAGGCCAAGATCCCCGAGAATTTCCCCGG
GTGA
GTGGACATCACCCAACTGCTGGCCTTCAGCGTGAAGAACAAGGCCTCGGACTTGCATCTGTCATCCGGCCTGCCACCCAT
GATCCGCGTGCACGGCGACGTGCGGCGCATCAACGTCGACGCGCTCGACCACAAGGCCGTGCACGCCATGGTGTACGACA
TCATGAGCGACACGCACCGCAAGCACTACGAAGAATTCCTCGAGGTCGACTTCTCCTTCGAGATCGACGGCCTCGCGCGC
TTCCGCGTCAATGCCTTTAACCAGGCGCGCGGCGCGGCGGCGGTGTTCCGGACCATTCCGTCCAAGATCCTCACGCTGGA
GCAGCTCAACGCGCCGAAGATTTTCGGCGACCTCGCCCTCAAGCCCCGCGGCCTGGTGCTGGTGACCGGCCCCACCGGCT
CGGGCAAGTCCACCACGTTGGCCGCGATGATCAACTTCCTCAACGAGACCGAGTACGGCCACATCCTGACGGTGGAGGAC
CCGATCGAGTTCGTGCACGAATCGAAGAAGTGCCTGATCAACCAGCGCGAGGTCGGGCCGATGACGCTGTCCTTCGCCAA
TGCGCTGCGTTCGGCGCTTCGCGAGGACCCCGACGCGATCCTGGTTGGCGAAATGCGCGACCTGGAGACCATCCGCCTCG
CCATGACTGCGGCCGAGACGGGCCACCTGGTGTTCGGCACCCTGCACACCTCCTCGGCCGCCAAGACGATCGACCGGATC
ATCGACGTGTTCCCGGGCGAGGAGAAGGAAATGATCCGCGCCATGCTGTCGGAGTCGCTGCAGGCCGTGGTCTCGCAGAC
CCTGTGCAAGACCAAGGACGGCCAGGGCCGGGTGGCGGCGCACGAAATCATGCTGGGCACCTCGGCCATCCGCAACCTGA
TCCGCGAAGGCAAGGTGGCGCAGATGTATTCCTCGATCCAGACCGGCAGCGGCCAGGGCATGCAGACGCTGGACCAGTGC
CTGACGGACCTTGTGCGGCGCAATGTCATTTCCGCCGCAGAAGCCCGCGGCAAGGCCAAGATCCCCGAGAATTTCCCCGG
GTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas stutzeri DSM 10701 |
75.652 |
99.424 |
0.752 |
| pilT | Pseudomonas aeruginosa PAK |
75.362 |
99.424 |
0.749 |
| pilT | Acinetobacter nosocomialis M2 |
75.072 |
99.424 |
0.746 |
| pilT | Acinetobacter baumannii D1279779 |
75.072 |
99.424 |
0.746 |
| pilT | Acinetobacter baumannii strain A118 |
75.072 |
99.424 |
0.746 |
| pilT | Acinetobacter baylyi ADP1 |
74.203 |
99.424 |
0.738 |
| pilT | Legionella pneumophila strain Lp02 |
73.156 |
97.695 |
0.715 |
| pilT | Legionella pneumophila strain ERS1305867 |
73.156 |
97.695 |
0.715 |
| pilT | Neisseria meningitidis 8013 |
67.826 |
99.424 |
0.674 |
| pilT | Neisseria gonorrhoeae MS11 |
67.536 |
99.424 |
0.671 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
67.155 |
98.271 |
0.66 |
| pilT | Vibrio cholerae strain A1552 |
67.155 |
98.271 |
0.66 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.304 |
99.424 |
0.51 |
| pilU | Vibrio cholerae strain A1552 |
42.985 |
96.542 |
0.415 |
| pilU | Acinetobacter baylyi ADP1 |
40.462 |
99.712 |
0.403 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.597 |
96.542 |
0.392 |