Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | ACNI65_RS00740 | Genome accession | NZ_CP182288 |
| Coordinates | 166997..168040 (-) | Length | 347 a.a. |
| NCBI ID | WP_416760647.1 | Uniprot ID | - |
| Organism | Roseateles sp. So40a | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 161997..173040
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACNI65_RS00725 (ACNI65_00725) | - | 163107..164507 (+) | 1401 | WP_416760644.1 | efflux transporter outer membrane subunit | - |
| ACNI65_RS00730 (ACNI65_00730) | - | 164713..165615 (-) | 903 | WP_416760645.1 | NAD(P)-dependent oxidoreductase | - |
| ACNI65_RS00735 (ACNI65_00735) | pilU | 165766..166902 (-) | 1137 | WP_416760646.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| ACNI65_RS00740 (ACNI65_00740) | pilT | 166997..168040 (-) | 1044 | WP_416760647.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| ACNI65_RS00745 (ACNI65_00745) | - | 168066..168794 (+) | 729 | WP_416760648.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| ACNI65_RS00750 (ACNI65_00750) | - | 168794..170284 (+) | 1491 | WP_416760649.1 | diguanylate cyclase | - |
| ACNI65_RS00755 (ACNI65_00755) | - | 170617..172179 (+) | 1563 | WP_416760650.1 | methyl-accepting chemotaxis protein | - |
| ACNI65_RS00760 (ACNI65_00760) | - | 172243..172584 (+) | 342 | WP_416760651.1 | energy transducer TonB | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 38322.05 Da Isoelectric Point: 7.0532
>NTDB_id=1100983 ACNI65_RS00740 WP_416760647.1 166997..168040(-) (pilT) [Roseateles sp. So40a]
MDITQLLAFSVKNKASDLHLSAGLPPMIRVHGDVRRINVEALEHRQVHDMVYDIMSDAQRKTYEETLEVDFSFEIQGLAR
FRVNAYNQNRGAGAVFRTIPSKILTLEQLNCPKVFTELAMKPRGIVLVTGPTGSGKSTTLAAMVNHLNENEYGHILTVED
PIEFVHESKKCLVNQREVGPHTMSFANALRSALREDPDCILVGEMRDLETIRLALTAAETGHLVFGTLHTSSAAKTVDRI
VDVFPAAEKDMVRAMLSESLQAVISQTLCKTKDGSGRVAAHEIMLGTAAIRNLIRENKIAQMYSSIQTGNNLGMQTLDQC
LTDLVRRNVISPAEARAKAKMPENFPG
MDITQLLAFSVKNKASDLHLSAGLPPMIRVHGDVRRINVEALEHRQVHDMVYDIMSDAQRKTYEETLEVDFSFEIQGLAR
FRVNAYNQNRGAGAVFRTIPSKILTLEQLNCPKVFTELAMKPRGIVLVTGPTGSGKSTTLAAMVNHLNENEYGHILTVED
PIEFVHESKKCLVNQREVGPHTMSFANALRSALREDPDCILVGEMRDLETIRLALTAAETGHLVFGTLHTSSAAKTVDRI
VDVFPAAEKDMVRAMLSESLQAVISQTLCKTKDGSGRVAAHEIMLGTAAIRNLIRENKIAQMYSSIQTGNNLGMQTLDQC
LTDLVRRNVISPAEARAKAKMPENFPG
Nucleotide
Download Length: 1044 bp
>NTDB_id=1100983 ACNI65_RS00740 WP_416760647.1 166997..168040(-) (pilT) [Roseateles sp. So40a]
ATGGACATCACCCAACTGCTGGCATTCTCGGTCAAGAACAAGGCCTCCGACCTTCACTTGTCCGCGGGACTGCCCCCCAT
GATCCGCGTCCATGGCGACGTGCGGCGCATCAACGTCGAGGCCCTCGAGCACCGCCAGGTGCACGACATGGTCTACGACA
TCATGAGCGACGCCCAGCGCAAGACCTACGAGGAGACGCTGGAAGTCGACTTCTCGTTCGAGATCCAGGGCCTGGCGCGC
TTCCGCGTCAACGCCTACAACCAGAACCGCGGCGCGGGCGCCGTGTTCCGGACCATTCCGAGCAAGATCCTGACGCTGGA
GCAGCTGAACTGCCCCAAGGTGTTCACCGAGCTGGCGATGAAGCCGCGCGGCATCGTGCTGGTCACGGGGCCGACGGGCT
CGGGCAAGTCGACCACGCTGGCGGCGATGGTCAACCACCTCAACGAGAACGAGTACGGCCACATTCTGACCGTCGAGGAC
CCGATCGAGTTCGTGCACGAGTCCAAGAAGTGCCTGGTCAACCAGCGCGAGGTCGGCCCGCACACGATGAGCTTCGCCAA
CGCGCTGCGCTCGGCGCTGCGCGAGGACCCTGACTGCATCCTGGTCGGTGAAATGCGGGACCTGGAGACCATCCGCCTGG
CGCTGACCGCGGCGGAAACGGGTCACCTGGTCTTCGGCACGCTGCACACGTCCTCGGCCGCCAAGACGGTGGACCGGATC
GTCGACGTGTTCCCCGCGGCCGAGAAGGACATGGTCCGCGCGATGCTGTCGGAATCGCTGCAGGCGGTGATCTCGCAGAC
GCTGTGCAAGACCAAGGACGGCAGCGGCCGCGTGGCGGCGCACGAGATCATGCTGGGCACCGCGGCGATCCGGAACCTGA
TCCGCGAGAACAAGATCGCGCAGATGTACTCGTCGATCCAGACGGGCAACAACCTGGGCATGCAGACGCTGGACCAGTGC
CTGACCGACCTGGTCCGCCGCAACGTCATCAGCCCCGCCGAGGCGCGCGCCAAGGCGAAGATGCCCGAGAACTTCCCCGG
CTGA
ATGGACATCACCCAACTGCTGGCATTCTCGGTCAAGAACAAGGCCTCCGACCTTCACTTGTCCGCGGGACTGCCCCCCAT
GATCCGCGTCCATGGCGACGTGCGGCGCATCAACGTCGAGGCCCTCGAGCACCGCCAGGTGCACGACATGGTCTACGACA
TCATGAGCGACGCCCAGCGCAAGACCTACGAGGAGACGCTGGAAGTCGACTTCTCGTTCGAGATCCAGGGCCTGGCGCGC
TTCCGCGTCAACGCCTACAACCAGAACCGCGGCGCGGGCGCCGTGTTCCGGACCATTCCGAGCAAGATCCTGACGCTGGA
GCAGCTGAACTGCCCCAAGGTGTTCACCGAGCTGGCGATGAAGCCGCGCGGCATCGTGCTGGTCACGGGGCCGACGGGCT
CGGGCAAGTCGACCACGCTGGCGGCGATGGTCAACCACCTCAACGAGAACGAGTACGGCCACATTCTGACCGTCGAGGAC
CCGATCGAGTTCGTGCACGAGTCCAAGAAGTGCCTGGTCAACCAGCGCGAGGTCGGCCCGCACACGATGAGCTTCGCCAA
CGCGCTGCGCTCGGCGCTGCGCGAGGACCCTGACTGCATCCTGGTCGGTGAAATGCGGGACCTGGAGACCATCCGCCTGG
CGCTGACCGCGGCGGAAACGGGTCACCTGGTCTTCGGCACGCTGCACACGTCCTCGGCCGCCAAGACGGTGGACCGGATC
GTCGACGTGTTCCCCGCGGCCGAGAAGGACATGGTCCGCGCGATGCTGTCGGAATCGCTGCAGGCGGTGATCTCGCAGAC
GCTGTGCAAGACCAAGGACGGCAGCGGCCGCGTGGCGGCGCACGAGATCATGCTGGGCACCGCGGCGATCCGGAACCTGA
TCCGCGAGAACAAGATCGCGCAGATGTACTCGTCGATCCAGACGGGCAACAACCTGGGCATGCAGACGCTGGACCAGTGC
CTGACCGACCTGGTCCGCCGCAACGTCATCAGCCCCGCCGAGGCGCGCGCCAAGGCGAAGATGCCCGAGAACTTCCCCGG
CTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter nosocomialis M2 |
76.812 |
99.424 |
0.764 |
| pilT | Acinetobacter baumannii D1279779 |
76.812 |
99.424 |
0.764 |
| pilT | Acinetobacter baumannii strain A118 |
76.812 |
99.424 |
0.764 |
| pilT | Pseudomonas aeruginosa PAK |
76.232 |
99.424 |
0.758 |
| pilT | Pseudomonas stutzeri DSM 10701 |
75.652 |
99.424 |
0.752 |
| pilT | Acinetobacter baylyi ADP1 |
73.623 |
99.424 |
0.732 |
| pilT | Legionella pneumophila strain Lp02 |
71.681 |
97.695 |
0.7 |
| pilT | Legionella pneumophila strain ERS1305867 |
71.681 |
97.695 |
0.7 |
| pilT | Neisseria meningitidis 8013 |
68.116 |
99.424 |
0.677 |
| pilT | Neisseria gonorrhoeae MS11 |
67.826 |
99.424 |
0.674 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
66.276 |
98.271 |
0.651 |
| pilT | Vibrio cholerae strain A1552 |
66.276 |
98.271 |
0.651 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
49.275 |
99.424 |
0.49 |
| pilU | Acinetobacter baylyi ADP1 |
41.618 |
99.712 |
0.415 |
| pilU | Vibrio cholerae strain A1552 |
42.687 |
96.542 |
0.412 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.896 |
96.542 |
0.395 |