Detailed information
Bioinformatically predicted
Overview
| Name | pilU | Type | Machinery gene |
| Locus tag | ACNI65_RS00735 | Genome accession | NZ_CP182288 |
| Coordinates | 165766..166902 (-) | Length | 378 a.a. |
| NCBI ID | WP_416760646.1 | Uniprot ID | - |
| Organism | Roseateles sp. So40a | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 160766..171902
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACNI65_RS00725 (ACNI65_00725) | - | 163107..164507 (+) | 1401 | WP_416760644.1 | efflux transporter outer membrane subunit | - |
| ACNI65_RS00730 (ACNI65_00730) | - | 164713..165615 (-) | 903 | WP_416760645.1 | NAD(P)-dependent oxidoreductase | - |
| ACNI65_RS00735 (ACNI65_00735) | pilU | 165766..166902 (-) | 1137 | WP_416760646.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| ACNI65_RS00740 (ACNI65_00740) | pilT | 166997..168040 (-) | 1044 | WP_416760647.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| ACNI65_RS00745 (ACNI65_00745) | - | 168066..168794 (+) | 729 | WP_416760648.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| ACNI65_RS00750 (ACNI65_00750) | - | 168794..170284 (+) | 1491 | WP_416760649.1 | diguanylate cyclase | - |
Sequence
Protein
Download Length: 378 a.a. Molecular weight: 42181.47 Da Isoelectric Point: 6.6651
>NTDB_id=1100982 ACNI65_RS00735 WP_416760646.1 165766..166902(-) (pilU) [Roseateles sp. So40a]
MERDQATKFINDLLRLMVSRKGSDLFLTAEFPPAVKVDGKVTKVSPQPLTGQHTLQLARAIMNDKQAADFERTKECNFAI
SPQGIGRFRVNAYIQQGHVALVLRTIPQTLPTVESLELPPILKDVVQTKRGLVILVGATGSGKSTSLAAMVDHRNETTYG
HIITIEDPVEFVHPHKNCIVSQREVGLDTEGWEQALKNTLRQAPDVILMGEIRDRETMEHAVAFAETGHLCMATLHANSA
NQALDRIINFFPEERRAQLLMDLSLNLKALVSQRLLPRQEGKGRIAAVEILLNTPLISDLIFKGEVGEIKEIMKRSRELG
MQTFDQALFDLYEFGKVTYEDALRNADSVNDLRLQIKLNSERARSGDLSSGTEHLTIV
MERDQATKFINDLLRLMVSRKGSDLFLTAEFPPAVKVDGKVTKVSPQPLTGQHTLQLARAIMNDKQAADFERTKECNFAI
SPQGIGRFRVNAYIQQGHVALVLRTIPQTLPTVESLELPPILKDVVQTKRGLVILVGATGSGKSTSLAAMVDHRNETTYG
HIITIEDPVEFVHPHKNCIVSQREVGLDTEGWEQALKNTLRQAPDVILMGEIRDRETMEHAVAFAETGHLCMATLHANSA
NQALDRIINFFPEERRAQLLMDLSLNLKALVSQRLLPRQEGKGRIAAVEILLNTPLISDLIFKGEVGEIKEIMKRSRELG
MQTFDQALFDLYEFGKVTYEDALRNADSVNDLRLQIKLNSERARSGDLSSGTEHLTIV
Nucleotide
Download Length: 1137 bp
>NTDB_id=1100982 ACNI65_RS00735 WP_416760646.1 165766..166902(-) (pilU) [Roseateles sp. So40a]
ATGGAGCGCGATCAGGCCACCAAGTTCATCAACGATCTGCTTCGCCTGATGGTGTCGCGCAAGGGCTCCGACCTGTTCCT
GACGGCCGAGTTCCCGCCCGCGGTGAAGGTCGACGGCAAGGTGACCAAGGTGTCGCCTCAGCCGCTGACCGGCCAGCACA
CGCTGCAGCTGGCGCGGGCGATCATGAACGACAAGCAGGCCGCGGACTTCGAGCGCACGAAGGAATGCAACTTCGCGATC
TCGCCGCAGGGCATCGGCCGCTTCCGCGTCAACGCCTACATCCAGCAGGGCCACGTGGCGCTGGTGCTGCGGACGATTCC
GCAGACGCTGCCCACGGTGGAGTCGCTGGAGCTGCCGCCGATCCTGAAGGACGTGGTGCAGACCAAGCGCGGCCTGGTGA
TCCTGGTCGGCGCGACGGGCTCGGGCAAGAGCACCTCGCTGGCGGCGATGGTGGACCACCGCAACGAGACGACCTACGGC
CACATCATCACGATCGAGGATCCGGTCGAGTTCGTGCACCCGCACAAGAACTGCATCGTCAGCCAGCGCGAAGTCGGCCT
CGACACCGAAGGCTGGGAGCAGGCGCTGAAGAACACGCTGCGTCAGGCGCCGGACGTGATCCTGATGGGTGAGATCCGCG
ATCGCGAGACGATGGAGCACGCGGTGGCCTTCGCCGAGACGGGTCACCTGTGCATGGCCACGCTGCACGCCAACAGCGCC
AACCAGGCGCTGGACCGGATCATCAACTTCTTCCCGGAAGAACGCCGCGCGCAGCTGCTGATGGACCTGTCGCTGAACCT
GAAGGCGCTGGTGTCGCAGCGGCTGCTGCCGCGCCAGGAGGGCAAGGGCCGGATCGCCGCGGTGGAGATCCTGCTGAACA
CGCCGCTGATCAGCGACCTGATCTTCAAGGGCGAGGTGGGCGAGATCAAGGAAATCATGAAGCGCTCGCGCGAGCTCGGC
ATGCAGACCTTCGACCAGGCGCTGTTCGACCTCTACGAGTTCGGCAAGGTGACCTACGAGGACGCGCTGCGCAACGCCGA
CTCGGTGAACGACCTGCGCCTGCAGATCAAGCTCAACAGCGAGCGGGCGCGCAGCGGCGATCTGTCGTCGGGGACGGAAC
ACCTCACGATCGTCTGA
ATGGAGCGCGATCAGGCCACCAAGTTCATCAACGATCTGCTTCGCCTGATGGTGTCGCGCAAGGGCTCCGACCTGTTCCT
GACGGCCGAGTTCCCGCCCGCGGTGAAGGTCGACGGCAAGGTGACCAAGGTGTCGCCTCAGCCGCTGACCGGCCAGCACA
CGCTGCAGCTGGCGCGGGCGATCATGAACGACAAGCAGGCCGCGGACTTCGAGCGCACGAAGGAATGCAACTTCGCGATC
TCGCCGCAGGGCATCGGCCGCTTCCGCGTCAACGCCTACATCCAGCAGGGCCACGTGGCGCTGGTGCTGCGGACGATTCC
GCAGACGCTGCCCACGGTGGAGTCGCTGGAGCTGCCGCCGATCCTGAAGGACGTGGTGCAGACCAAGCGCGGCCTGGTGA
TCCTGGTCGGCGCGACGGGCTCGGGCAAGAGCACCTCGCTGGCGGCGATGGTGGACCACCGCAACGAGACGACCTACGGC
CACATCATCACGATCGAGGATCCGGTCGAGTTCGTGCACCCGCACAAGAACTGCATCGTCAGCCAGCGCGAAGTCGGCCT
CGACACCGAAGGCTGGGAGCAGGCGCTGAAGAACACGCTGCGTCAGGCGCCGGACGTGATCCTGATGGGTGAGATCCGCG
ATCGCGAGACGATGGAGCACGCGGTGGCCTTCGCCGAGACGGGTCACCTGTGCATGGCCACGCTGCACGCCAACAGCGCC
AACCAGGCGCTGGACCGGATCATCAACTTCTTCCCGGAAGAACGCCGCGCGCAGCTGCTGATGGACCTGTCGCTGAACCT
GAAGGCGCTGGTGTCGCAGCGGCTGCTGCCGCGCCAGGAGGGCAAGGGCCGGATCGCCGCGGTGGAGATCCTGCTGAACA
CGCCGCTGATCAGCGACCTGATCTTCAAGGGCGAGGTGGGCGAGATCAAGGAAATCATGAAGCGCTCGCGCGAGCTCGGC
ATGCAGACCTTCGACCAGGCGCTGTTCGACCTCTACGAGTTCGGCAAGGTGACCTACGAGGACGCGCTGCGCAACGCCGA
CTCGGTGAACGACCTGCGCCTGCAGATCAAGCTCAACAGCGAGCGGGCGCGCAGCGGCGATCTGTCGTCGGGGACGGAAC
ACCTCACGATCGTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilU | Pseudomonas stutzeri DSM 10701 |
62.295 |
96.825 |
0.603 |
| pilU | Acinetobacter baylyi ADP1 |
58.357 |
93.386 |
0.545 |
| pilU | Vibrio cholerae strain A1552 |
53.444 |
96.032 |
0.513 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
45.697 |
89.153 |
0.407 |
| pilT | Pseudomonas aeruginosa PAK |
44.51 |
89.153 |
0.397 |
| pilT | Acinetobacter nosocomialis M2 |
43.544 |
88.095 |
0.384 |
| pilT | Acinetobacter baylyi ADP1 |
43.544 |
88.095 |
0.384 |
| pilT | Acinetobacter baumannii strain A118 |
43.544 |
88.095 |
0.384 |
| pilT | Acinetobacter baumannii D1279779 |
43.544 |
88.095 |
0.384 |
| pilT | Pseudomonas stutzeri DSM 10701 |
43.027 |
89.153 |
0.384 |
| pilT | Legionella pneumophila strain ERS1305867 |
44.099 |
85.185 |
0.376 |
| pilT | Legionella pneumophila strain Lp02 |
44.099 |
85.185 |
0.376 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
44.164 |
83.862 |
0.37 |
| pilT | Vibrio cholerae strain A1552 |
44.164 |
83.862 |
0.37 |