Detailed information NTG1096042

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACMXYH_RS27835
• Genome accession: NZ_CP180479
• Coordinates: 6037142..6037552 (-)
• Length: 136 a.a.
• NCBI ID: WP_134422286.1
• Uniprot ID: -
• Organism: Pseudomonas sp. ZB1P45
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 6032142..6042552

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMXYH_RS27820	-	6032951..6035890 (+)	2940	WP_415765558.1	DUF748 domain-containing protein	-
ACMXYH_RS27825	-	6035890..6036186 (+)	297	WP_129441159.1	DUF2845 domain-containing protein	-
ACMXYH_RS27830	-	6036470..6036823 (-)	354	WP_129441155.1	BON domain-containing protein	-
ACMXYH_RS27835	pilA	6037142..6037552 (-)	411	WP_134422286.1	pilin	Machinery gene
ACMXYH_RS27840	pilB	6037778..6039478 (+)	1701	WP_415765559.1	type IV-A pilus assembly ATPase PilB	Machinery gene
ACMXYH_RS27845	pilC	6039481..6040698 (+)	1218	WP_415765560.1	type II secretion system F family protein	Machinery gene
ACMXYH_RS27850	pilD	6040700..6041572 (+)	873	WP_415765561.1	prepilin peptidase	Machinery gene
ACMXYH_RS27855	coaE	6041569..6042192 (+)	624	WP_415765562.1	dephospho-CoA kinase	-
ACMXYH_RS27860	yacG	6042189..6042389 (+)	201	WP_134422296.1	DNA gyrase inhibitor YacG	-

Sequence

Protein

• Length: 136 a.a.
• Molecular weight: 13801.06 Da
• Isoelectric Point: 8.1045

>NTDB_id=1096042 ACMXYH_RS27835 WP_134422286.1 6037142..6037552(-) (pilA) [Pseudomonas sp. ZB1P45]
MNTQKGFTLIELLIVVAIIGILATVALPQYSKYQSRAKVTAGLAEISALKVSYEDIINQGNAPTLALMGVNATTGNCTIA
VAGTVATGVGSIGCTILNANGLVAGKTITLSRTLDGGWTCASTVLKEYAPNGCPGV

Nucleotide

• Length: 411 bp

>NTDB_id=1096042 ACMXYH_RS27835 WP_134422286.1 6037142..6037552(-) (pilA) [Pseudomonas sp. ZB1P45]
ATGAATACTCAGAAAGGTTTTACGCTTATCGAGCTGTTGATCGTGGTGGCGATAATCGGGATCCTGGCGACGGTTGCGCT
ACCGCAATATTCGAAGTATCAATCGCGGGCGAAAGTAACTGCAGGTCTTGCTGAAATATCGGCACTGAAGGTCTCTTACG
AAGACATTATCAATCAAGGTAACGCCCCCACCCTTGCTCTGATGGGCGTTAACGCGACCACAGGTAATTGCACGATTGCG
GTGGCGGGCACCGTCGCTACCGGTGTTGGCAGTATTGGCTGCACGATCCTCAATGCAAACGGCCTGGTGGCCGGCAAGAC
CATCACGCTTTCGCGCACGCTTGACGGTGGCTGGACTTGCGCCTCGACAGTACTCAAAGAGTACGCGCCTAACGGTTGCC
CTGGCGTCTGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (1-27)

• Pilin (bacterial filament) (Pilin) (35-133)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Acinetobacter baumannii strain A118	48.905	100	0.493
pilA/pilAI	Pseudomonas stutzeri DSM 10701	48.529	100	0.485
comP	Acinetobacter baylyi ADP1	42.568	100	0.463
pilA	Vibrio cholerae C6706	42.254	100	0.441
pilA	Vibrio cholerae strain A1552	42.254	100	0.441
pilA	Vibrio cholerae O1 biovar El Tor strain E7946	42.254	100	0.441
pilA/pilAII	Pseudomonas stutzeri DSM 10701	44.444	99.265	0.441
pilA2	Legionella pneumophila str. Paris	42.754	100	0.434
pilA2	Legionella pneumophila strain ERS1305867	42.029	100	0.426
pilA	Pseudomonas aeruginosa PAK	37.584	100	0.412
pilA	Ralstonia pseudosolanacearum GMI1000	40.152	97.059	0.39
pilA	Vibrio parahaemolyticus RIMD 2210633	39.552	98.529	0.39
pilE	Neisseria gonorrhoeae MS11	37.778	99.265	0.375
pilA/pilA1	Eikenella corrodens VA1	36.842	97.794	0.36